Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Slc1a1-201ENSMUST00000025875 3800 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Trim63Q38HM4 Krr1-203ENSMUST00000163048 5023 ntAPPRIS P2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Trim63Q38HM4 Tmem106a-202ENSMUST00000100403 2428 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
Trim63Q38HM4 Clasp1-214ENSMUST00000189570 5502 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
Trim63Q38HM4 Itm2a-201ENSMUST00000033591 1744 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Trim63Q38HM4 Gcm2-201ENSMUST00000021791 3073 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Trim63Q38HM4 Nuggc-202ENSMUST00000150897 2745 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
Trim63Q38HM4 Gm38116-201ENSMUST00000193873 1533 ntBASIC8.59□□□□□ -1.03
Trim63Q38HM4 Hivep2-201ENSMUST00000015645 9763 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Trim63Q38HM4 Zmynd8-204ENSMUST00000109262 2515 ntTSL 5 BASIC8.59□□□□□ -1.03
Trim63Q38HM4 Fabp12-201ENSMUST00000029043 2512 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Trim63Q38HM4 Scmh1-202ENSMUST00000064991 2548 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
Trim63Q38HM4 Gm13762-202ENSMUST00000168169 2180 ntAPPRIS P1 TSL 2 BASIC8.59□□□□□ -1.03
Trim63Q38HM4 Atf7-203ENSMUST00000169033 2165 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Trim63Q38HM4 Aplnr-201ENSMUST00000057019 3699 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
Trim63Q38HM4 Scnn1a-207ENSMUST00000177329 2807 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
Trim63Q38HM4 Dcx-204ENSMUST00000112856 1333 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.03
Trim63Q38HM4 Gm8793-201ENSMUST00000183069 1303 ntBASIC8.59□□□□□ -1.03
Trim63Q38HM4 Olfr749-202ENSMUST00000214290 1330 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
Trim63Q38HM4 Rcbtb2-201ENSMUST00000022702 2971 ntAPPRIS P2 TSL 5 BASIC8.59□□□□□ -1.03
Trim63Q38HM4 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Trim63Q38HM4 Gm26912-201ENSMUST00000180988 1483 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Trim63Q38HM4 Nell1-202ENSMUST00000107603 2756 ntTSL 5 BASIC8.59□□□□□ -1.03
Trim63Q38HM4 Scn11a-202ENSMUST00000215718 5899 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Trim63Q38HM4 Kpna7-201ENSMUST00000110672 2262 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.03
Trim63Q38HM4 Cdca2-205ENSMUST00000150006 3568 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Trim63Q38HM4 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Trim63Q38HM4 Cdc25b-201ENSMUST00000028804 3089 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.03
Trim63Q38HM4 Zfp39-201ENSMUST00000102703 3890 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Trim63Q38HM4 Myo15b-207ENSMUST00000167507 1785 ntTSL 5 BASIC8.59□□□□□ -1.03
Trim63Q38HM4 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
Trim63Q38HM4 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Trim63Q38HM4 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC8.59□□□□□ -1.03
Trim63Q38HM4 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC8.59□□□□□ -1.03
Trim63Q38HM4 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Trim63Q38HM4 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Trim63Q38HM4 Mir6956-201ENSMUST00000183598 62 ntBASIC8.59□□□□□ -1.03
Trim63Q38HM4 Gm28882-201ENSMUST00000185504 314 ntBASIC8.59□□□□□ -1.03
Trim63Q38HM4 Gm29346-201ENSMUST00000188147 255 ntTSL 3 BASIC8.59□□□□□ -1.03
Trim63Q38HM4 Gm28631-201ENSMUST00000190740 334 ntBASIC8.59□□□□□ -1.03
Trim63Q38HM4 Gm9124-201ENSMUST00000191789 1092 ntBASIC8.59□□□□□ -1.03
Trim63Q38HM4 Gm9113-201ENSMUST00000192510 1018 ntBASIC8.59□□□□□ -1.03
Trim63Q38HM4 Gm9131-201ENSMUST00000193557 1089 ntBASIC8.59□□□□□ -1.03
Trim63Q38HM4 Gm9121-201ENSMUST00000193749 1071 ntBASIC8.59□□□□□ -1.03
Trim63Q38HM4 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC8.59□□□□□ -1.03
Trim63Q38HM4 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC8.59□□□□□ -1.03
Trim63Q38HM4 Gm2553-201ENSMUST00000215986 605 ntBASIC8.59□□□□□ -1.03
Trim63Q38HM4 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Trim63Q38HM4 Gm7446-201ENSMUST00000221035 1240 ntBASIC8.59□□□□□ -1.03
Trim63Q38HM4 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC8.59□□□□□ -1.03
Trim63Q38HM4 AC154461.5-201ENSMUST00000225429 774 ntBASIC8.59□□□□□ -1.03
Trim63Q38HM4 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
Trim63Q38HM4 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Trim63Q38HM4 Plekha7-206ENSMUST00000182487 3476 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
Trim63Q38HM4 Supt20-ps-201ENSMUST00000117999 1560 ntBASIC8.59□□□□□ -1.03
Trim63Q38HM4 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Trim63Q38HM4 Bhlhe40-201ENSMUST00000032194 3113 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Trim63Q38HM4 Olfr531-202ENSMUST00000216053 2330 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
Trim63Q38HM4 Gbp7-202ENSMUST00000171263 2497 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Trim63Q38HM4 Gm38263-201ENSMUST00000195879 3059 ntBASIC8.59□□□□□ -1.03
Trim63Q38HM4 Glb1l2-202ENSMUST00000066560 3688 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Trim63Q38HM4 Zfp655-202ENSMUST00000167316 4104 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.03
Trim63Q38HM4 Gm38344-201ENSMUST00000195306 1353 ntBASIC8.59□□□□□ -1.03
Trim63Q38HM4 Milr1-202ENSMUST00000106794 1514 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Trim63Q38HM4 Slc6a12-209ENSMUST00000171008 1674 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
Trim63Q38HM4 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Trim63Q38HM4 Atxn7l1os1-201ENSMUST00000155877 1836 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Trim63Q38HM4 Zwilch-209ENSMUST00000176299 1831 ntTSL 5 BASIC8.59□□□□□ -1.03
Trim63Q38HM4 Gm26790-201ENSMUST00000181078 2291 ntTSL 5 BASIC8.59□□□□□ -1.03
Trim63Q38HM4 Pde4d-209ENSMUST00000122041 2554 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Trim63Q38HM4 Chat-201ENSMUST00000070125 2858 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.04
Trim63Q38HM4 Flnb-201ENSMUST00000052678 9100 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Trim63Q38HM4 Cdc6-201ENSMUST00000092706 4614 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trim63Q38HM4 Ndrg4-202ENSMUST00000073139 2966 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trim63Q38HM4 Mpp1-201ENSMUST00000033775 2525 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trim63Q38HM4 Gm37829-201ENSMUST00000193864 2213 ntBASIC8.58□□□□□ -1.04
Trim63Q38HM4 Gm32914-201ENSMUST00000203815 2228 ntBASIC8.58□□□□□ -1.04
Trim63Q38HM4 Morf4l2-215ENSMUST00000169418 1782 ntAPPRIS P1 TSL 2 BASIC8.58□□□□□ -1.04
Trim63Q38HM4 Trim66-202ENSMUST00000106739 9250 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Trim63Q38HM4 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Trim63Q38HM4 Gsdme-203ENSMUST00000165099 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trim63Q38HM4 Adarb2-201ENSMUST00000064473 6721 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trim63Q38HM4 Stat1-206ENSMUST00000186857 4241 ntAPPRIS P2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trim63Q38HM4 Nalcn-201ENSMUST00000000201 7122 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Trim63Q38HM4 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trim63Q38HM4 Zfhx3-204ENSMUST00000220518 17152 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Trim63Q38HM4 Cyp2b13-201ENSMUST00000005669 1875 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trim63Q38HM4 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
Trim63Q38HM4 Map3k19-205ENSMUST00000208183 4865 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
Trim63Q38HM4 9630028H03Rik-202ENSMUST00000153402 1559 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Trim63Q38HM4 Krt33b-201ENSMUST00000073890 1581 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trim63Q38HM4 Mast4-201ENSMUST00000099202 7709 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
Trim63Q38HM4 AW146154-201ENSMUST00000098509 3411 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trim63Q38HM4 Bmx-201ENSMUST00000112263 2433 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
Trim63Q38HM4 Gm44190-201ENSMUST00000205083 1401 ntBASIC8.58□□□□□ -1.04
Trim63Q38HM4 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC8.58□□□□□ -1.04
Trim63Q38HM4 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC8.58□□□□□ -1.04
Trim63Q38HM4 Gm10156-201ENSMUST00000122364 462 ntBASIC8.58□□□□□ -1.04
Trim63Q38HM4 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC8.58□□□□□ -1.04
Trim63Q38HM4 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms