Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Gm7790-201ENSMUST00000118716 1310 ntBASIC13.23□□□□□ -0.29
Smarcc1P97496 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcc1P97496 Eif2ak4-203ENSMUST00000110869 1715 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcc1P97496 Palm2-201ENSMUST00000102904 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcc1P97496 Dppa3-ps-201ENSMUST00000116499 451 ntBASIC13.23□□□□□ -0.29
Smarcc1P97496 Rps18-ps1-201ENSMUST00000120838 459 ntBASIC13.23□□□□□ -0.29
Smarcc1P97496 Epp13-201ENSMUST00000121024 957 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Smarcc1P97496 Olfr333-ps1-201ENSMUST00000122311 940 ntBASIC13.23□□□□□ -0.29
Smarcc1P97496 Gm14152-201ENSMUST00000127020 1073 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcc1P97496 Gm13554-201ENSMUST00000137349 477 ntTSL 5 BASIC13.23□□□□□ -0.29
Smarcc1P97496 Gm16013-201ENSMUST00000152249 353 ntTSL 3 BASIC13.23□□□□□ -0.29
Smarcc1P97496 Gm15587-202ENSMUST00000156403 709 ntTSL 5 BASIC13.23□□□□□ -0.29
Smarcc1P97496 Gm17019-201ENSMUST00000167908 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcc1P97496 Fam47e-205ENSMUST00000175974 1016 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcc1P97496 Gm3052-201ENSMUST00000186409 829 ntBASIC13.23□□□□□ -0.29
Smarcc1P97496 1700052H01Rik-201ENSMUST00000196142 717 ntTSL 3 BASIC13.23□□□□□ -0.29
Smarcc1P97496 Gm46328-201ENSMUST00000217924 976 ntTSL 5 BASIC13.23□□□□□ -0.29
Smarcc1P97496 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcc1P97496 1700016D06Rik-201ENSMUST00000033906 1263 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcc1P97496 Olfr1349-201ENSMUST00000051982 1054 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Smarcc1P97496 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Smarcc1P97496 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC13.23□□□□□ -0.29
Smarcc1P97496 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Smarcc1P97496 Cyp2j13-202ENSMUST00000097973 1648 ntTSL 5 BASIC13.23□□□□□ -0.29
Smarcc1P97496 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Smarcc1P97496 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcc1P97496 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcc1P97496 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcc1P97496 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcc1P97496 Ptbp3-201ENSMUST00000030076 6855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcc1P97496 Arhgap33os-201ENSMUST00000124276 2648 ntTSL 2 BASIC13.23□□□□□ -0.29
Smarcc1P97496 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcc1P97496 Gm11497-201ENSMUST00000138295 2154 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Smarcc1P97496 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Smarcc1P97496 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smarcc1P97496 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smarcc1P97496 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Smarcc1P97496 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smarcc1P97496 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Smarcc1P97496 Gm45170-201ENSMUST00000206746 1671 ntBASIC13.22□□□□□ -0.29
Smarcc1P97496 Gm7823-201ENSMUST00000120761 1623 ntBASIC13.22□□□□□ -0.29
Smarcc1P97496 Ube2l3-203ENSMUST00000115700 571 ntTSL 5 BASIC13.22□□□□□ -0.29
Smarcc1P97496 Apela-201ENSMUST00000124790 945 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Smarcc1P97496 Gm17147-201ENSMUST00000164176 432 ntBASIC13.22□□□□□ -0.29
Smarcc1P97496 Gm27200-201ENSMUST00000184626 657 ntTSL 3 BASIC13.22□□□□□ -0.29
Smarcc1P97496 B130024G19Rik-204ENSMUST00000191084 634 ntTSL 5 BASIC13.22□□□□□ -0.29
Smarcc1P97496 Gm37141-201ENSMUST00000191938 422 ntBASIC13.22□□□□□ -0.29
Smarcc1P97496 Gm5865-201ENSMUST00000198713 637 ntBASIC13.22□□□□□ -0.29
Smarcc1P97496 Gm46210-201ENSMUST00000218800 577 ntTSL 3 BASIC13.22□□□□□ -0.29
Smarcc1P97496 Proca1-202ENSMUST00000078099 1254 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smarcc1P97496 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smarcc1P97496 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Smarcc1P97496 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smarcc1P97496 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smarcc1P97496 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smarcc1P97496 Ppp6c-205ENSMUST00000204701 1495 ntTSL 5 BASIC13.22□□□□□ -0.29
Smarcc1P97496 Adh1-201ENSMUST00000004232 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smarcc1P97496 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smarcc1P97496 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Smarcc1P97496 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC13.22□□□□□ -0.29
Smarcc1P97496 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smarcc1P97496 H2-M10.4-201ENSMUST00000057502 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smarcc1P97496 Abcf3-201ENSMUST00000003319 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smarcc1P97496 Gm9864-201ENSMUST00000090043 1656 ntBASIC13.21□□□□□ -0.29
Smarcc1P97496 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Smarcc1P97496 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Smarcc1P97496 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smarcc1P97496 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smarcc1P97496 Akap12-202ENSMUST00000215696 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smarcc1P97496 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smarcc1P97496 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smarcc1P97496 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smarcc1P97496 Sfxn5-204ENSMUST00000113788 514 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Smarcc1P97496 Ptpa-210ENSMUST00000136009 810 ntTSL 3 BASIC13.21□□□□□ -0.29
Smarcc1P97496 Gm17120-201ENSMUST00000164734 743 ntTSL 3 BASIC13.21□□□□□ -0.29
Smarcc1P97496 Gm2663-201ENSMUST00000166306 862 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smarcc1P97496 Rps28-205ENSMUST00000173844 382 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smarcc1P97496 Gm38004-201ENSMUST00000192972 357 ntBASIC13.21□□□□□ -0.29
Smarcc1P97496 Gimd1-205ENSMUST00000212852 1234 ntTSL 5 BASIC13.21□□□□□ -0.29
Smarcc1P97496 AC116589.8-201ENSMUST00000220945 364 ntTSL 2 BASIC13.21□□□□□ -0.29
Smarcc1P97496 AC114585.2-201ENSMUST00000227693 486 ntBASIC13.21□□□□□ -0.29
Smarcc1P97496 Adig-201ENSMUST00000059889 632 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smarcc1P97496 Tbata-202ENSMUST00000079235 696 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Smarcc1P97496 n-R5s25-201ENSMUST00000082923 119 ntBASIC13.21□□□□□ -0.29
Smarcc1P97496 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC13.21□□□□□ -0.29
Smarcc1P97496 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Smarcc1P97496 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smarcc1P97496 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC13.21□□□□□ -0.29
Smarcc1P97496 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smarcc1P97496 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Smarcc1P97496 Sppl2c-201ENSMUST00000059448 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smarcc1P97496 Olfr55-202ENSMUST00000214888 4675 ntTSL 5 BASIC13.21□□□□□ -0.3
Smarcc1P97496 Ubap2l-203ENSMUST00000090908 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Smarcc1P97496 Psd2-203ENSMUST00000175734 4300 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Smarcc1P97496 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Smarcc1P97496 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Smarcc1P97496 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Smarcc1P97496 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smarcc1P97496 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Smarcc1P97496 D030068K23Rik-203ENSMUST00000181098 1399 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms