Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Gm8482-201ENSMUST00000117972 471 ntBASIC10.84□□□□□ -0.67
Ybx1P62960 Gm13841-201ENSMUST00000118829 483 ntBASIC10.84□□□□□ -0.67
Ybx1P62960 Gm10443-201ENSMUST00000119024 210 ntBASIC10.84□□□□□ -0.67
Ybx1P62960 Gm11449-201ENSMUST00000119175 476 ntBASIC10.84□□□□□ -0.67
Ybx1P62960 Gm14650-201ENSMUST00000120400 889 ntBASIC10.84□□□□□ -0.67
Ybx1P62960 Gm14699-201ENSMUST00000122340 228 ntBASIC10.84□□□□□ -0.67
Ybx1P62960 Gm829-201ENSMUST00000123741 465 ntTSL 3 BASIC10.84□□□□□ -0.67
Ybx1P62960 1700095J12Rik-201ENSMUST00000124620 737 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ybx1P62960 Gm13393-201ENSMUST00000141935 396 ntTSL 5 BASIC10.84□□□□□ -0.67
Ybx1P62960 Gm16235-202ENSMUST00000149562 206 ntTSL 3 BASIC10.84□□□□□ -0.67
Ybx1P62960 Gm4775-201ENSMUST00000169588 402 ntBASIC10.84□□□□□ -0.67
Ybx1P62960 Gm22662-201ENSMUST00000175290 256 ntBASIC10.84□□□□□ -0.67
Ybx1P62960 G530012D18Rik-201ENSMUST00000178024 420 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Ybx1P62960 Gm8210-201ENSMUST00000178557 483 ntBASIC10.84□□□□□ -0.67
Ybx1P62960 Gm15454-201ENSMUST00000179718 483 ntBASIC10.84□□□□□ -0.67
Ybx1P62960 Gm16973-201ENSMUST00000180682 1299 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ybx1P62960 Gm29669-201ENSMUST00000188605 881 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ybx1P62960 Gm20568-201ENSMUST00000197129 208 ntBASIC10.84□□□□□ -0.67
Ybx1P62960 Gm42493-201ENSMUST00000197559 1121 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ybx1P62960 Gm44196-203ENSMUST00000204359 1190 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ybx1P62960 Smim23-201ENSMUST00000020508 620 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ybx1P62960 4933430L12Rik-201ENSMUST00000206788 1194 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ybx1P62960 Gm33570-201ENSMUST00000207608 1254 ntTSL 5 BASIC10.84□□□□□ -0.67
Ybx1P62960 Fut1-202ENSMUST00000209379 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ybx1P62960 Tmem238l-203ENSMUST00000211300 930 ntAPPRIS P1 TSL 3 BASIC10.84□□□□□ -0.67
Ybx1P62960 AC113291.2-201ENSMUST00000215490 1205 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ybx1P62960 AC164087.2-201ENSMUST00000216206 1072 ntBASIC10.84□□□□□ -0.67
Ybx1P62960 Hamp2-203ENSMUST00000217812 437 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ybx1P62960 Gm32939-201ENSMUST00000222336 843 ntTSL 3 BASIC10.84□□□□□ -0.67
Ybx1P62960 AC164883.7-201ENSMUST00000228534 851 ntBASIC10.84□□□□□ -0.67
Ybx1P62960 Gm6344-201ENSMUST00000075962 483 ntBASIC10.84□□□□□ -0.67
Ybx1P62960 Pfn4-202ENSMUST00000178879 1396 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ybx1P62960 Tpp2-201ENSMUST00000087933 4649 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ybx1P62960 Gp2-201ENSMUST00000033255 1993 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ybx1P62960 Cfap54-201ENSMUST00000020200 2473 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Ybx1P62960 Inpp4a-202ENSMUST00000058307 2963 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ybx1P62960 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ybx1P62960 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ybx1P62960 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ybx1P62960 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ybx1P62960 Mir9-3hg-202ENSMUST00000181511 3412 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ybx1P62960 Eif2s3y-201ENSMUST00000091197 1836 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ybx1P62960 Gm45663-201ENSMUST00000210429 1632 ntBASIC10.84□□□□□ -0.67
Ybx1P62960 Slc10a4-202ENSMUST00000201304 1419 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ybx1P62960 A1cf-204ENSMUST00000224564 1432 ntBASIC10.84□□□□□ -0.67
Ybx1P62960 Fanca-202ENSMUST00000118395 3274 ntTSL 1 (best) BASIC10.83□□□□□ -0.67
Ybx1P62960 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ybx1P62960 Bsnd-201ENSMUST00000054472 2756 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ybx1P62960 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ybx1P62960 Gm43375-201ENSMUST00000196705 2480 ntBASIC10.83□□□□□ -0.68
Ybx1P62960 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ybx1P62960 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Ybx1P62960 Tasp1-203ENSMUST00000110079 2258 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ybx1P62960 Grik4-201ENSMUST00000034515 3413 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Ybx1P62960 Zfp354a-204ENSMUST00000109122 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ybx1P62960 Oxsm-201ENSMUST00000022311 3759 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ybx1P62960 Arhgap33os-201ENSMUST00000124276 2648 ntTSL 2 BASIC10.83□□□□□ -0.68
Ybx1P62960 Gas7-202ENSMUST00000108680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ybx1P62960 1700022A22Rik-202ENSMUST00000187130 1458 ntTSL 5 BASIC10.83□□□□□ -0.68
Ybx1P62960 A930003A15Rik-201ENSMUST00000100083 746 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ybx1P62960 Trav13-2-201ENSMUST00000103658 390 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Ybx1P62960 Gm12435-201ENSMUST00000118949 1016 ntBASIC10.83□□□□□ -0.68
Ybx1P62960 Gm6276-201ENSMUST00000120159 579 ntBASIC10.83□□□□□ -0.68
Ybx1P62960 Gm15839-201ENSMUST00000138684 612 ntTSL 3 BASIC10.83□□□□□ -0.68
Ybx1P62960 Gm17782-201ENSMUST00000174345 880 ntBASIC10.83□□□□□ -0.68
Ybx1P62960 Gm20618-202ENSMUST00000177482 1227 ntTSL 3 BASIC10.83□□□□□ -0.68
Ybx1P62960 1110020A21Rik-201ENSMUST00000181147 853 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Ybx1P62960 Gm17733-201ENSMUST00000181883 1048 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Ybx1P62960 Gm28391-201ENSMUST00000185202 379 ntBASIC10.83□□□□□ -0.68
Ybx1P62960 Gm29528-201ENSMUST00000186699 379 ntBASIC10.83□□□□□ -0.68
Ybx1P62960 Gm29526-201ENSMUST00000187217 379 ntBASIC10.83□□□□□ -0.68
Ybx1P62960 Gm8828-201ENSMUST00000196786 1290 ntBASIC10.83□□□□□ -0.68
Ybx1P62960 Gm31678-201ENSMUST00000198262 454 ntTSL 3 BASIC10.83□□□□□ -0.68
Ybx1P62960 Gm32872-201ENSMUST00000220037 205 ntTSL 3 BASIC10.83□□□□□ -0.68
Ybx1P62960 AC165092.1-201ENSMUST00000224018 486 ntBASIC10.83□□□□□ -0.68
Ybx1P62960 AC165260.2-201ENSMUST00000225371 395 ntBASIC10.83□□□□□ -0.68
Ybx1P62960 AC107711.3-201ENSMUST00000228939 1035 ntBASIC10.83□□□□□ -0.68
Ybx1P62960 Iah1-201ENSMUST00000076813 1141 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ybx1P62960 Olfr47-201ENSMUST00000078057 1059 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Ybx1P62960 Mrps14-202ENSMUST00000097193 787 ntTSL 2 BASIC10.83□□□□□ -0.68
Ybx1P62960 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Ybx1P62960 Gdi1-201ENSMUST00000015435 2666 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ybx1P62960 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ybx1P62960 Gm26586-201ENSMUST00000181918 1745 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Ybx1P62960 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ybx1P62960 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Ybx1P62960 Gm26637-201ENSMUST00000180880 2289 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Ybx1P62960 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ybx1P62960 Zfp454-201ENSMUST00000050595 2059 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ybx1P62960 Gm6713-201ENSMUST00000216137 1446 ntBASIC10.83□□□□□ -0.68
Ybx1P62960 Bco1-203ENSMUST00000176860 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ybx1P62960 Acsbg1-201ENSMUST00000034822 2880 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ybx1P62960 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ybx1P62960 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ybx1P62960 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Ybx1P62960 Lpo-201ENSMUST00000103177 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ybx1P62960 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ybx1P62960 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ybx1P62960 Abcf1-201ENSMUST00000043757 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ybx1P62960 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms