Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Gm42858-201ENSMUST00000202512 1704 ntBASIC9.27□□□□□ -0.93
Lsm6P62313 Rnf216-201ENSMUST00000053498 4474 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Lsm6P62313 Gm20715-201ENSMUST00000054781 4460 ntAPPRIS P1 TSL 2 BASIC9.27□□□□□ -0.93
Lsm6P62313 Grb10-202ENSMUST00000109653 2048 ntTSL 5 BASIC9.27□□□□□ -0.93
Lsm6P62313 Mamld1-201ENSMUST00000082088 4796 ntAPPRIS P4 TSL 5 BASIC9.27□□□□□ -0.93
Lsm6P62313 CK137956-201ENSMUST00000030614 2319 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Lsm6P62313 Ap1b1-201ENSMUST00000009234 4085 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Lsm6P62313 Cln3-204ENSMUST00000116269 2487 ntAPPRIS P2 TSL 5 BASIC9.27□□□□□ -0.93
Lsm6P62313 Cr1l-204ENSMUST00000193094 2776 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Lsm6P62313 Ctcfl-201ENSMUST00000094287 3217 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
Lsm6P62313 Lrsam1-201ENSMUST00000028132 3981 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Lsm6P62313 Calr4-201ENSMUST00000030285 1606 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Lsm6P62313 Ufsp2-201ENSMUST00000034051 1640 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Lsm6P62313 Rad50-201ENSMUST00000020649 5153 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Lsm6P62313 Morf4l2-215ENSMUST00000169418 1782 ntAPPRIS P1 TSL 2 BASIC9.27□□□□□ -0.93
Lsm6P62313 AC125351.1-201ENSMUST00000221438 2223 ntBASIC9.27□□□□□ -0.93
Lsm6P62313 Pax6-204ENSMUST00000111083 2370 ntAPPRIS ALT1 TSL 5 BASIC9.27□□□□□ -0.93
Lsm6P62313 Jmjd4-201ENSMUST00000045279 4315 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Lsm6P62313 Gm16070-201ENSMUST00000127328 5210 ntTSL 2 BASIC9.27□□□□□ -0.93
Lsm6P62313 Tmem30c-203ENSMUST00000120112 3478 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Lsm6P62313 Tmprss3-202ENSMUST00000114549 2872 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Lsm6P62313 Rapgef4os2-201ENSMUST00000128165 2116 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Lsm6P62313 Nr1h4-201ENSMUST00000058126 1964 ntAPPRIS P3 TSL 1 (best) BASIC9.26□□□□□ -0.93
Lsm6P62313 C030014I23Rik-204ENSMUST00000217463 1370 ntTSL 5 BASIC9.26□□□□□ -0.93
Lsm6P62313 Zfp423-203ENSMUST00000165770 4334 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Lsm6P62313 4932438H23Rik-201ENSMUST00000035689 2684 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Lsm6P62313 Cxcl11-201ENSMUST00000077820 1581 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
Lsm6P62313 Prr16-201ENSMUST00000116639 2224 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Lsm6P62313 Ccdc32-203ENSMUST00000110834 828 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Lsm6P62313 Gm11544-201ENSMUST00000120215 382 ntBASIC9.26□□□□□ -0.93
Lsm6P62313 Gm12950-201ENSMUST00000121683 417 ntBASIC9.26□□□□□ -0.93
Lsm6P62313 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC9.26□□□□□ -0.93
Lsm6P62313 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Lsm6P62313 Gm15911-201ENSMUST00000138992 809 ntTSL 3 BASIC9.26□□□□□ -0.93
Lsm6P62313 Ins2-208ENSMUST00000162317 297 ntTSL 5 BASIC9.26□□□□□ -0.93
Lsm6P62313 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC9.26□□□□□ -0.93
Lsm6P62313 Gm18733-202ENSMUST00000174447 401 ntBASIC9.26□□□□□ -0.93
Lsm6P62313 AC238811.4-201ENSMUST00000178019 1246 ntBASIC9.26□□□□□ -0.93
Lsm6P62313 AC238940.3-201ENSMUST00000178830 1246 ntBASIC9.26□□□□□ -0.93
Lsm6P62313 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Lsm6P62313 Gm17798-201ENSMUST00000182282 1035 ntBASIC9.26□□□□□ -0.93
Lsm6P62313 Gm37390-201ENSMUST00000192452 872 ntBASIC9.26□□□□□ -0.93
Lsm6P62313 Gm5543-201ENSMUST00000193329 1091 ntBASIC9.26□□□□□ -0.93
Lsm6P62313 Gm4430-202ENSMUST00000193902 1041 ntBASIC9.26□□□□□ -0.93
Lsm6P62313 Gm20186-201ENSMUST00000201775 737 ntTSL 3 BASIC9.26□□□□□ -0.93
Lsm6P62313 Klk1b15-ps-201ENSMUST00000206273 715 ntBASIC9.26□□□□□ -0.93
Lsm6P62313 Gm44605-201ENSMUST00000206892 949 ntBASIC9.26□□□□□ -0.93
Lsm6P62313 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC9.26□□□□□ -0.93
Lsm6P62313 Gm18514-201ENSMUST00000218980 436 ntBASIC9.26□□□□□ -0.93
Lsm6P62313 BC106175-202ENSMUST00000219344 1213 ntBASIC9.26□□□□□ -0.93
Lsm6P62313 AC153512.3-201ENSMUST00000220426 662 ntTSL 3 BASIC9.26□□□□□ -0.93
Lsm6P62313 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Lsm6P62313 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
Lsm6P62313 2010001K21Rik-201ENSMUST00000060680 519 ntBASIC9.26□□□□□ -0.93
Lsm6P62313 Gm5805-201ENSMUST00000072779 456 ntBASIC9.26□□□□□ -0.93
Lsm6P62313 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Lsm6P62313 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Lsm6P62313 n-R5s211-201ENSMUST00000093689 119 ntBASIC9.26□□□□□ -0.93
Lsm6P62313 Gm44103-201ENSMUST00000204364 3662 ntBASIC9.26□□□□□ -0.93
Lsm6P62313 Stx17-203ENSMUST00000107721 1771 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Lsm6P62313 Commd1-204ENSMUST00000159081 4508 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Lsm6P62313 Pcdhb9-201ENSMUST00000057228 3055 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
Lsm6P62313 Txk-201ENSMUST00000113604 2260 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Lsm6P62313 Sgk3-203ENSMUST00000168907 3779 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Lsm6P62313 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Lsm6P62313 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Lsm6P62313 Cd247-205ENSMUST00000161559 1816 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Lsm6P62313 Micalcl-203ENSMUST00000106645 2309 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
Lsm6P62313 Angptl2-201ENSMUST00000004208 3339 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Lsm6P62313 C230021G24Rik-201ENSMUST00000181196 3679 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Lsm6P62313 Tiam1-204ENSMUST00000114124 7406 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
Lsm6P62313 Gm40634-201ENSMUST00000214129 2001 ntTSL 5 BASIC9.26□□□□□ -0.93
Lsm6P62313 Olfr46-203ENSMUST00000214180 7750 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
Lsm6P62313 Gm42031-201ENSMUST00000209823 1885 ntTSL 5 BASIC9.25□□□□□ -0.93
Lsm6P62313 Cyp2g1-201ENSMUST00000040944 1896 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Lsm6P62313 Tmem67-202ENSMUST00000108293 3945 ntAPPRIS ALT2 TSL 5 BASIC9.25□□□□□ -0.93
Lsm6P62313 Unc79-202ENSMUST00000101099 8874 ntAPPRIS P2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Lsm6P62313 Mindy4-201ENSMUST00000053094 4270 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Lsm6P62313 Kif2a-206ENSMUST00000159772 2570 ntTSL 5 BASIC9.25□□□□□ -0.93
Lsm6P62313 Fga-202ENSMUST00000166581 2587 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Lsm6P62313 Zfp872-201ENSMUST00000091508 1395 ntTSL 5 BASIC9.25□□□□□ -0.93
Lsm6P62313 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Lsm6P62313 Svil-211ENSMUST00000143254 6594 ntAPPRIS ALT2 TSL 5 BASIC9.25□□□□□ -0.93
Lsm6P62313 Kansl1-201ENSMUST00000018556 5061 ntAPPRIS P2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Lsm6P62313 4930579F01Rik-202ENSMUST00000199293 1598 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Lsm6P62313 Slc27a5-201ENSMUST00000032539 2288 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Lsm6P62313 A1cf-201ENSMUST00000075838 2989 ntAPPRIS P2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Lsm6P62313 Capn15-204ENSMUST00000212149 4555 ntAPPRIS P3 TSL 5 BASIC9.25□□□□□ -0.93
Lsm6P62313 Picalm-201ENSMUST00000049537 3528 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Lsm6P62313 Olfr707-204ENSMUST00000213251 1777 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Lsm6P62313 Ifi211-201ENSMUST00000009340 1785 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Lsm6P62313 Nemp2-201ENSMUST00000165859 3396 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Lsm6P62313 Olfr171-202ENSMUST00000205467 1406 ntAPPRIS ALT1 TSL 2 BASIC9.25□□□□□ -0.93
Lsm6P62313 Ttll7-205ENSMUST00000170055 6075 ntAPPRIS ALT2 TSL 5 BASIC9.25□□□□□ -0.93
Lsm6P62313 Specc1l-201ENSMUST00000040105 5928 ntTSL 5 BASIC9.25□□□□□ -0.93
Lsm6P62313 Med17-201ENSMUST00000034411 3964 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Lsm6P62313 Zcchc12-202ENSMUST00000115256 2197 ntAPPRIS P1 TSL 2 BASIC9.25□□□□□ -0.93
Lsm6P62313 Smyd1-202ENSMUST00000114186 3292 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Lsm6P62313 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC9.25□□□□□ -0.93
Lsm6P62313 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC9.25□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms