Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Atp5e-201ENSMUST00000016396 421 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Atxn1P54254 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Atxn1P54254 1700026J14Rik-201ENSMUST00000180937 794 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Atxn1P54254 Gm5342-201ENSMUST00000181982 1003 ntBASIC10.55□□□□□ -0.72
Atxn1P54254 1700012J22Rik-201ENSMUST00000193492 830 ntBASIC10.55□□□□□ -0.72
Atxn1P54254 Gm9409-201ENSMUST00000197017 316 ntBASIC10.55□□□□□ -0.72
Atxn1P54254 9530062K07Rik-201ENSMUST00000203332 787 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Atxn1P54254 Gm5311-201ENSMUST00000203518 709 ntBASIC10.55□□□□□ -0.72
Atxn1P54254 Ssna1-201ENSMUST00000028342 862 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Atxn1P54254 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Atxn1P54254 Gm5507-201ENSMUST00000091897 1008 ntBASIC10.55□□□□□ -0.72
Atxn1P54254 Gm8618-201ENSMUST00000097570 432 ntBASIC10.55□□□□□ -0.72
Atxn1P54254 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Atxn1P54254 Pde5a-201ENSMUST00000066728 6939 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Atxn1P54254 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Atxn1P54254 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Atxn1P54254 Vcan-202ENSMUST00000109544 5702 ntTSL 5 BASIC10.55□□□□□ -0.72
Atxn1P54254 Cwc25-202ENSMUST00000107579 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Atxn1P54254 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Atxn1P54254 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Atxn1P54254 Lysmd4-202ENSMUST00000179106 3319 ntAPPRIS ALT2 TSL 2 BASIC10.55□□□□□ -0.72
Atxn1P54254 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Atxn1P54254 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Atxn1P54254 Ceacam1-205ENSMUST00000206171 1722 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Atxn1P54254 Ms4a7-203ENSMUST00000067532 1334 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Atxn1P54254 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Atxn1P54254 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Atxn1P54254 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC10.55□□□□□ -0.72
Atxn1P54254 Ppid-201ENSMUST00000029382 1752 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Atxn1P54254 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Atxn1P54254 Slc17a5-201ENSMUST00000052441 3236 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Atxn1P54254 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Atxn1P54254 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Atxn1P54254 Gm15984-202ENSMUST00000156466 1534 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Atxn1P54254 Ms4a6b-201ENSMUST00000025580 1687 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Atxn1P54254 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Atxn1P54254 Gm14005-209ENSMUST00000224993 1832 ntBASIC10.54□□□□□ -0.72
Atxn1P54254 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Atxn1P54254 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC10.54□□□□□ -0.72
Atxn1P54254 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Atxn1P54254 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Atxn1P54254 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Atxn1P54254 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Atxn1P54254 Gm43860-201ENSMUST00000201742 2705 ntBASIC10.54□□□□□ -0.72
Atxn1P54254 Tom1l2-206ENSMUST00000102683 4999 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Atxn1P54254 Scgb1b29-201ENSMUST00000108094 282 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Atxn1P54254 Pxmp4-202ENSMUST00000109703 560 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Atxn1P54254 Gm11919-201ENSMUST00000117609 721 ntBASIC10.54□□□□□ -0.72
Atxn1P54254 Gm14571-201ENSMUST00000118292 570 ntBASIC10.54□□□□□ -0.72
Atxn1P54254 Gm11544-201ENSMUST00000120215 382 ntBASIC10.54□□□□□ -0.72
Atxn1P54254 Prelid3b-203ENSMUST00000120822 622 ntTSL 3 BASIC10.54□□□□□ -0.72
Atxn1P54254 Gm12254-201ENSMUST00000134617 471 ntBASIC10.54□□□□□ -0.72
Atxn1P54254 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Atxn1P54254 Gm6038-201ENSMUST00000154310 948 ntBASIC10.54□□□□□ -0.72
Atxn1P54254 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Atxn1P54254 Gm8020-201ENSMUST00000170174 1406 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Atxn1P54254 Gm3115-202ENSMUST00000177660 618 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Atxn1P54254 Gm6337-203ENSMUST00000177662 618 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Atxn1P54254 Gm3727-202ENSMUST00000178251 618 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Atxn1P54254 Arl14-201ENSMUST00000183126 1200 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Atxn1P54254 Gm37368-201ENSMUST00000193173 3212 ntBASIC10.54□□□□□ -0.72
Atxn1P54254 Gm29328-212ENSMUST00000209182 1168 ntTSL 5 BASIC10.54□□□□□ -0.72
Atxn1P54254 Nudc-ps1-201ENSMUST00000209275 551 ntBASIC10.54□□□□□ -0.72
Atxn1P54254 Gm19228-201ENSMUST00000214030 717 ntBASIC10.54□□□□□ -0.72
Atxn1P54254 AC156633.1-201ENSMUST00000215971 614 ntTSL 2 BASIC10.54□□□□□ -0.72
Atxn1P54254 AC122891.1-201ENSMUST00000218671 268 ntBASIC10.54□□□□□ -0.72
Atxn1P54254 Gm18042-201ENSMUST00000219887 790 ntBASIC10.54□□□□□ -0.72
Atxn1P54254 CU025215.1-201ENSMUST00000222986 603 ntBASIC10.54□□□□□ -0.72
Atxn1P54254 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Atxn1P54254 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Atxn1P54254 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Atxn1P54254 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Atxn1P54254 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Atxn1P54254 Galntl5-201ENSMUST00000030778 1627 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Atxn1P54254 Tex45-201ENSMUST00000047265 1613 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Atxn1P54254 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Atxn1P54254 Spata5-201ENSMUST00000029277 2890 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Atxn1P54254 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Atxn1P54254 Dync2li1-201ENSMUST00000025101 1324 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Atxn1P54254 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Atxn1P54254 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC10.54□□□□□ -0.72
Atxn1P54254 Angel1-201ENSMUST00000021682 3850 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Atxn1P54254 Gm19178-201ENSMUST00000217524 1819 ntBASIC10.54□□□□□ -0.72
Atxn1P54254 Gm10537-201ENSMUST00000192625 1698 ntBASIC10.53□□□□□ -0.72
Atxn1P54254 Lingo1-201ENSMUST00000053568 3295 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Atxn1P54254 Zfp217-202ENSMUST00000109155 5670 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Atxn1P54254 CK137956-201ENSMUST00000030614 2319 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Atxn1P54254 Cyp2d41-ps-201ENSMUST00000180453 1503 ntBASIC10.53□□□□□ -0.72
Atxn1P54254 Gm20052-201ENSMUST00000200831 1525 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Atxn1P54254 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC10.53□□□□□ -0.72
Atxn1P54254 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Atxn1P54254 Olfr1156-202ENSMUST00000216191 3300 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Atxn1P54254 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Atxn1P54254 Tjp1-201ENSMUST00000032729 6102 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Atxn1P54254 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Atxn1P54254 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Atxn1P54254 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Atxn1P54254 Fam222b-203ENSMUST00000155571 3358 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Atxn1P54254 Lims1-201ENSMUST00000020077 1565 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Atxn1P54254 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms