Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Gm13351-201ENSMUST00000118087 414 ntBASIC9.21□□□□□ -0.94
Upk2P38575 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC9.21□□□□□ -0.94
Upk2P38575 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC9.21□□□□□ -0.94
Upk2P38575 Aamdc-206ENSMUST00000136757 789 ntAPPRIS P1 TSL 2 BASIC9.21□□□□□ -0.94
Upk2P38575 Gm16441-201ENSMUST00000138176 924 ntBASIC9.21□□□□□ -0.94
Upk2P38575 Gm6038-201ENSMUST00000154310 948 ntBASIC9.21□□□□□ -0.94
Upk2P38575 Gm3415-202ENSMUST00000179214 1154 ntAPPRIS P2 TSL 5 BASIC9.21□□□□□ -0.94
Upk2P38575 4933417D19Rik-201ENSMUST00000181432 1229 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Upk2P38575 Gm26943-201ENSMUST00000182295 957 ntBASIC9.21□□□□□ -0.94
Upk2P38575 Omt2b-203ENSMUST00000187667 727 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Upk2P38575 Adh6-ps1-202ENSMUST00000196293 754 ntBASIC9.21□□□□□ -0.94
Upk2P38575 Gm3409-203ENSMUST00000199142 1167 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.94
Upk2P38575 Gm3402-203ENSMUST00000200228 1154 ntAPPRIS P2 TSL 5 BASIC9.21□□□□□ -0.94
Upk2P38575 Ccdc114-205ENSMUST00000211367 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Upk2P38575 E230034D01Rik-203ENSMUST00000217357 1159 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Upk2P38575 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC9.21□□□□□ -0.94
Upk2P38575 Gm46224-201ENSMUST00000220221 1242 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Upk2P38575 CT030653.1-201ENSMUST00000224382 1279 ntBASIC9.21□□□□□ -0.94
Upk2P38575 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC9.21□□□□□ -0.94
Upk2P38575 Rab29-201ENSMUST00000027693 1226 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Upk2P38575 Taar7a-201ENSMUST00000078532 1077 ntAPPRIS P1 BASIC9.21□□□□□ -0.94
Upk2P38575 Taar7b-201ENSMUST00000092658 1077 ntAPPRIS P1 BASIC9.21□□□□□ -0.94
Upk2P38575 Pcdhga7-201ENSMUST00000192511 4730 ntAPPRIS P2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Upk2P38575 Pcdhgc5-201ENSMUST00000055935 4741 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Upk2P38575 Cnr2-202ENSMUST00000097843 3867 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Upk2P38575 Rbm8a-201ENSMUST00000048915 2608 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Upk2P38575 2810454H06Rik-201ENSMUST00000189942 3148 ntBASIC9.21□□□□□ -0.94
Upk2P38575 Dchs1-201ENSMUST00000078482 10754 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.94
Upk2P38575 Gpr37-201ENSMUST00000054867 4974 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Upk2P38575 Rpap2-201ENSMUST00000065422 2268 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.94
Upk2P38575 Nucks1-201ENSMUST00000062264 5998 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.94
Upk2P38575 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Upk2P38575 Pklr-201ENSMUST00000047111 2787 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Upk2P38575 Kalrn-202ENSMUST00000089655 6506 ntTSL 5 BASIC9.21□□□□□ -0.94
Upk2P38575 Myo18a-208ENSMUST00000108375 7513 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.94
Upk2P38575 Col5a2-201ENSMUST00000086430 6625 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Upk2P38575 Tcn2-205ENSMUST00000109991 1943 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.94
Upk2P38575 AC124561.1-202ENSMUST00000228652 1929 ntBASIC9.21□□□□□ -0.94
Upk2P38575 Mitf-201ENSMUST00000043628 1921 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Upk2P38575 Phc1-215ENSMUST00000161739 3893 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.94
Upk2P38575 B4galt4-204ENSMUST00000114711 1481 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Upk2P38575 AC154575.1-201ENSMUST00000227166 1474 ntBASIC9.21□□□□□ -0.94
Upk2P38575 Icam1-201ENSMUST00000086399 2535 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Upk2P38575 Hddc3-201ENSMUST00000032747 1510 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Upk2P38575 Marveld2-201ENSMUST00000022137 3061 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Upk2P38575 Il18bp-202ENSMUST00000209368 2596 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Upk2P38575 Cpvl-201ENSMUST00000166545 1597 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Upk2P38575 Tiam1-204ENSMUST00000114124 7406 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Upk2P38575 N4bp2-201ENSMUST00000087264 5308 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Upk2P38575 Dip2c-202ENSMUST00000169960 4801 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Upk2P38575 Gm26908-201ENSMUST00000181856 1637 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Upk2P38575 AC151836.1-201ENSMUST00000228730 1637 ntBASIC9.2□□□□□ -0.94
Upk2P38575 Tenm2-208ENSMUST00000163524 8668 ntAPPRIS P2 TSL 5 BASIC9.2□□□□□ -0.94
Upk2P38575 Cdh18-207ENSMUST00000226693 2165 ntBASIC9.2□□□□□ -0.94
Upk2P38575 Hist4h4-201ENSMUST00000179285 2863 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
Upk2P38575 Usp47-206ENSMUST00000215510 4697 ntTSL 5 BASIC9.2□□□□□ -0.94
Upk2P38575 Upk1b-201ENSMUST00000057767 1769 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Upk2P38575 N4bp2l1-205ENSMUST00000202031 1864 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Upk2P38575 Cfap43-202ENSMUST00000095998 3764 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Upk2P38575 Rxfp2-201ENSMUST00000065745 2539 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
Upk2P38575 Ptgr2-201ENSMUST00000123614 3168 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Upk2P38575 4933439C10Rik-203ENSMUST00000132226 3184 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Upk2P38575 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
Upk2P38575 Gm22937-201ENSMUST00000103954 131 ntBASIC9.2□□□□□ -0.94
Upk2P38575 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Upk2P38575 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC9.2□□□□□ -0.94
Upk2P38575 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Upk2P38575 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC9.2□□□□□ -0.94
Upk2P38575 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC9.2□□□□□ -0.94
Upk2P38575 Snrnp25-202ENSMUST00000121182 659 ntAPPRIS ALT2 TSL 3 BASIC9.2□□□□□ -0.94
Upk2P38575 Gm12426-201ENSMUST00000153083 371 ntTSL 5 BASIC9.2□□□□□ -0.94
Upk2P38575 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Upk2P38575 Gm5274-201ENSMUST00000182641 1003 ntBASIC9.2□□□□□ -0.94
Upk2P38575 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC9.2□□□□□ -0.94
Upk2P38575 Gm29155-201ENSMUST00000185910 269 ntBASIC9.2□□□□□ -0.94
Upk2P38575 Gm28415-201ENSMUST00000187528 452 ntTSL 2 BASIC9.2□□□□□ -0.94
Upk2P38575 Gm28324-201ENSMUST00000187913 264 ntBASIC9.2□□□□□ -0.94
Upk2P38575 Gm37723-201ENSMUST00000194480 565 ntBASIC9.2□□□□□ -0.94
Upk2P38575 Gm43460-201ENSMUST00000202491 1057 ntBASIC9.2□□□□□ -0.94
Upk2P38575 Fcer2a-205ENSMUST00000208145 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Upk2P38575 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC9.2□□□□□ -0.94
Upk2P38575 Gm45308-201ENSMUST00000210610 415 ntBASIC9.2□□□□□ -0.94
Upk2P38575 Chordc1-202ENSMUST00000213605 519 ntTSL 2 BASIC9.2□□□□□ -0.94
Upk2P38575 Gstz1-203ENSMUST00000220574 971 ntTSL 2 BASIC9.2□□□□□ -0.94
Upk2P38575 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Upk2P38575 Tspo2-201ENSMUST00000024794 956 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Upk2P38575 Sh3glb1-204ENSMUST00000199531 2584 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Upk2P38575 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC9.2□□□□□ -0.94
Upk2P38575 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC9.2□□□□□ -0.94
Upk2P38575 Lrrc23-202ENSMUST00000112475 1444 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Upk2P38575 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC9.2□□□□□ -0.94
Upk2P38575 Gm12381-201ENSMUST00000126314 2186 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Upk2P38575 Hcrtr2-203ENSMUST00000184757 2230 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Upk2P38575 Gm32914-201ENSMUST00000203815 2228 ntBASIC9.2□□□□□ -0.94
Upk2P38575 Sun1-205ENSMUST00000110883 3714 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Upk2P38575 Khdrbs2-204ENSMUST00000188257 5278 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Upk2P38575 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Upk2P38575 Myo9a-205ENSMUST00000135298 12198 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
Upk2P38575 Atxn1-203ENSMUST00000180110 3901 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Upk2P38575 Ccdc87-201ENSMUST00000088653 3163 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms