Protein–RNA interactions for Protein: P23463

Hoxd8, Homeobox protein Hox-D8, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd8P23463 Mrps14-202ENSMUST00000097193 787 ntTSL 2 BASIC11.07□□□□□ -0.64
Hoxd8P23463 Gm42822-201ENSMUST00000200507 1529 ntBASIC11.07□□□□□ -0.64
Hoxd8P23463 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Hoxd8P23463 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC11.07□□□□□ -0.64
Hoxd8P23463 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hoxd8P23463 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Hoxd8P23463 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hoxd8P23463 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Hoxd8P23463 Efna1-203ENSMUST00000118860 1403 ntTSL 5 BASIC11.07□□□□□ -0.64
Hoxd8P23463 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hoxd8P23463 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Hoxd8P23463 CN725425-201ENSMUST00000109284 1929 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Hoxd8P23463 Epx-201ENSMUST00000049768 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hoxd8P23463 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC11.07□□□□□ -0.64
Hoxd8P23463 Lrrc57-201ENSMUST00000102496 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hoxd8P23463 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hoxd8P23463 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hoxd8P23463 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hoxd8P23463 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hoxd8P23463 Galntl5-201ENSMUST00000030778 1627 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hoxd8P23463 Lin54-210ENSMUST00000154921 3734 ntTSL 5 BASIC11.06□□□□□ -0.64
Hoxd8P23463 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hoxd8P23463 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hoxd8P23463 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hoxd8P23463 1700048O20Rik-202ENSMUST00000214777 1900 ntTSL 3 BASIC11.06□□□□□ -0.64
Hoxd8P23463 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hoxd8P23463 Gm16440-201ENSMUST00000100900 1089 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Hoxd8P23463 Zbp1-202ENSMUST00000109116 770 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Hoxd8P23463 Gm21103-201ENSMUST00000112737 984 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Hoxd8P23463 Gm11411-201ENSMUST00000117951 719 ntBASIC11.06□□□□□ -0.64
Hoxd8P23463 Gm10230-201ENSMUST00000119362 867 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hoxd8P23463 Gm13792-201ENSMUST00000121350 423 ntBASIC11.06□□□□□ -0.64
Hoxd8P23463 Mettl5os-201ENSMUST00000129114 667 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Hoxd8P23463 Gm12326-201ENSMUST00000132986 618 ntTSL 5 BASIC11.06□□□□□ -0.64
Hoxd8P23463 Gm8582-201ENSMUST00000164061 789 ntBASIC11.06□□□□□ -0.64
Hoxd8P23463 Gm3047-201ENSMUST00000164069 822 ntAPPRIS P5 TSL 5 BASIC11.06□□□□□ -0.64
Hoxd8P23463 Gm17063-201ENSMUST00000168135 456 ntBASIC11.06□□□□□ -0.64
Hoxd8P23463 Gm3029-201ENSMUST00000168306 984 ntAPPRIS P5 TSL 5 BASIC11.06□□□□□ -0.64
Hoxd8P23463 Gm7876-201ENSMUST00000169465 984 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Hoxd8P23463 Gm3043-201ENSMUST00000170639 821 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hoxd8P23463 Gm20703-201ENSMUST00000175668 385 ntTSL 2 BASIC11.06□□□□□ -0.64
Hoxd8P23463 Gm28721-201ENSMUST00000187649 918 ntTSL 3 BASIC11.06□□□□□ -0.64
Hoxd8P23463 Gm37469-201ENSMUST00000193728 890 ntBASIC11.06□□□□□ -0.64
Hoxd8P23463 Gm42208-201ENSMUST00000198215 670 ntTSL 3 BASIC11.06□□□□□ -0.64
Hoxd8P23463 Gm34868-201ENSMUST00000218341 530 ntTSL 3 BASIC11.06□□□□□ -0.64
Hoxd8P23463 CU025215.1-201ENSMUST00000222986 603 ntBASIC11.06□□□□□ -0.64
Hoxd8P23463 AC134860.5-201ENSMUST00000225071 1249 ntBASIC11.06□□□□□ -0.64
Hoxd8P23463 Ankrd45-201ENSMUST00000052245 849 ntAPPRIS P2 TSL 5 BASIC11.06□□□□□ -0.64
Hoxd8P23463 Tceanc2-203ENSMUST00000058585 766 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Hoxd8P23463 Gm9701-201ENSMUST00000077976 427 ntBASIC11.06□□□□□ -0.64
Hoxd8P23463 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hoxd8P23463 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Hoxd8P23463 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hoxd8P23463 3110062G12Rik-201ENSMUST00000192113 1419 ntBASIC11.06□□□□□ -0.64
Hoxd8P23463 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Hoxd8P23463 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Hoxd8P23463 AC154220.1-201ENSMUST00000225033 1705 ntBASIC11.06□□□□□ -0.64
Hoxd8P23463 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Hoxd8P23463 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hoxd8P23463 Smpd4-218ENSMUST00000170273 2166 ntTSL 5 BASIC11.06□□□□□ -0.64
Hoxd8P23463 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC11.06□□□□□ -0.64
Hoxd8P23463 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC11.05□□□□□ -0.64
Hoxd8P23463 Gm5532-201ENSMUST00000097531 1751 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Hoxd8P23463 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hoxd8P23463 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Hoxd8P23463 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hoxd8P23463 Itpa-201ENSMUST00000103193 1390 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hoxd8P23463 Nos1ap-203ENSMUST00000160466 1533 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Hoxd8P23463 Gm7052-201ENSMUST00000167568 1512 ntBASIC11.05□□□□□ -0.64
Hoxd8P23463 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Hoxd8P23463 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hoxd8P23463 Rnf216-209ENSMUST00000200607 3704 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hoxd8P23463 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC11.05□□□□□ -0.64
Hoxd8P23463 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hoxd8P23463 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC11.05□□□□□ -0.64
Hoxd8P23463 Gm13777-201ENSMUST00000118208 345 ntBASIC11.05□□□□□ -0.64
Hoxd8P23463 Gm11701-201ENSMUST00000121277 1142 ntBASIC11.05□□□□□ -0.64
Hoxd8P23463 Polr1c-203ENSMUST00000124655 829 ntTSL 5 BASIC11.05□□□□□ -0.64
Hoxd8P23463 Gm45591-201ENSMUST00000129058 843 ntTSL 3 BASIC11.05□□□□□ -0.64
Hoxd8P23463 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC11.05□□□□□ -0.64
Hoxd8P23463 C2-206ENSMUST00000152417 2157 ntTSL 5 BASIC11.05□□□□□ -0.64
Hoxd8P23463 Gm12278-201ENSMUST00000153718 407 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Hoxd8P23463 Gm14341-201ENSMUST00000154616 667 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Hoxd8P23463 Erg-208ENSMUST00000176345 1222 ntTSL 5 BASIC11.05□□□□□ -0.64
Hoxd8P23463 Kif4-ps-202ENSMUST00000185083 652 ntBASIC11.05□□□□□ -0.64
Hoxd8P23463 Zc2hc1a-203ENSMUST00000193010 1420 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Hoxd8P23463 Gm37005-201ENSMUST00000193281 1164 ntBASIC11.05□□□□□ -0.64
Hoxd8P23463 Gm9409-201ENSMUST00000197017 316 ntBASIC11.05□□□□□ -0.64
Hoxd8P23463 9230114K14Rik-202ENSMUST00000198720 837 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Hoxd8P23463 Gm19175-201ENSMUST00000199895 916 ntBASIC11.05□□□□□ -0.64
Hoxd8P23463 Gm43263-201ENSMUST00000201619 560 ntTSL 5 BASIC11.05□□□□□ -0.64
Hoxd8P23463 Gm44038-201ENSMUST00000203952 889 ntBASIC11.05□□□□□ -0.64
Hoxd8P23463 Gm18862-201ENSMUST00000204643 933 ntBASIC11.05□□□□□ -0.64
Hoxd8P23463 Gm45040-201ENSMUST00000207742 578 ntTSL 3 BASIC11.05□□□□□ -0.64
Hoxd8P23463 Gm45425-201ENSMUST00000211727 618 ntTSL 2 BASIC11.05□□□□□ -0.64
Hoxd8P23463 AC125374.1-201ENSMUST00000213573 1400 ntBASIC11.05□□□□□ -0.64
Hoxd8P23463 Gm19228-201ENSMUST00000214030 717 ntBASIC11.05□□□□□ -0.64
Hoxd8P23463 Gm5040-201ENSMUST00000218609 800 ntBASIC11.05□□□□□ -0.64
Hoxd8P23463 Gm34983-202ENSMUST00000220432 494 ntTSL 3 BASIC11.05□□□□□ -0.64
Hoxd8P23463 Gm29689-201ENSMUST00000221076 589 ntBASIC11.05□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms