Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
P20040 Gm28032-201ENSMUST00000184104 96 ntBASIC9.36□□□□□ -0.91
P20040 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC9.36□□□□□ -0.91
P20040 Gm28833-201ENSMUST00000189671 559 ntBASIC9.36□□□□□ -0.91
P20040 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC9.36□□□□□ -0.91
P20040 Gm5298-201ENSMUST00000201122 892 ntBASIC9.36□□□□□ -0.91
P20040 Gm44698-201ENSMUST00000207382 384 ntTSL 5 BASIC9.36□□□□□ -0.91
P20040 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC9.36□□□□□ -0.91
P20040 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC9.36□□□□□ -0.91
P20040 Gm25580-201ENSMUST00000083409 327 ntBASIC9.36□□□□□ -0.91
P20040 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
P20040 Ldlr-201ENSMUST00000034713 4627 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
P20040 Smarca1-202ENSMUST00000088973 4798 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
P20040 Arih2-201ENSMUST00000013338 3924 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
P20040 Slc45a3-202ENSMUST00000177943 3212 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
P20040 Ldb3-205ENSMUST00000090040 4981 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
P20040 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC9.36□□□□□ -0.91
P20040 C2-206ENSMUST00000152417 2157 ntTSL 5 BASIC9.36□□□□□ -0.91
P20040 Tada2a-201ENSMUST00000018795 2151 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
P20040 Kif1b-203ENSMUST00000060537 10233 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
P20040 Slc6a5-203ENSMUST00000207753 6966 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
P20040 Dglucy-201ENSMUST00000069782 3295 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
P20040 Inhbe-201ENSMUST00000059718 5319 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
P20040 Zfp956-201ENSMUST00000101445 2761 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
P20040 Sept9-204ENSMUST00000106349 2932 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
P20040 Tmem126b-201ENSMUST00000032843 2259 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
P20040 Slitrk4-202ENSMUST00000114679 3513 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
P20040 Mylk3-202ENSMUST00000121972 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
P20040 Slc24a1-201ENSMUST00000037798 5213 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
P20040 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
P20040 CT025639.2-202ENSMUST00000225298 1630 ntBASIC9.35□□□□□ -0.91
P20040 Gpr19-201ENSMUST00000046255 1610 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
P20040 Cdyl-201ENSMUST00000075220 3470 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
P20040 2310002L09Rik-202ENSMUST00000095023 1929 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
P20040 Gm37242-201ENSMUST00000191873 2085 ntBASIC9.35□□□□□ -0.91
P20040 Gm10748-202ENSMUST00000194396 2379 ntBASIC9.35□□□□□ -0.91
P20040 Stpg2-201ENSMUST00000062306 2818 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
P20040 Tra2b-204ENSMUST00000161286 3403 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
P20040 Bicd1-203ENSMUST00000111513 4049 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
P20040 Atg4b-201ENSMUST00000027502 4173 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
P20040 Adgra1-201ENSMUST00000026548 4758 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
P20040 Helz-202ENSMUST00000100305 5953 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
P20040 Ltc4s-201ENSMUST00000101265 480 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
P20040 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC9.35□□□□□ -0.91
P20040 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
P20040 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
P20040 Gpm6b-206ENSMUST00000112228 3083 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
P20040 Elmod3-202ENSMUST00000114069 2164 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
P20040 Gramd1b-202ENSMUST00000118159 2781 ntTSL 5 BASIC9.35□□□□□ -0.91
P20040 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC9.35□□□□□ -0.91
P20040 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC9.35□□□□□ -0.91
P20040 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC9.35□□□□□ -0.91
P20040 Gm4982-201ENSMUST00000160440 1098 ntBASIC9.35□□□□□ -0.91
P20040 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC9.35□□□□□ -0.91
P20040 Gm42660-201ENSMUST00000197733 947 ntBASIC9.35□□□□□ -0.91
P20040 Gm43830-201ENSMUST00000198760 1067 ntBASIC9.35□□□□□ -0.91
P20040 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC9.35□□□□□ -0.91
P20040 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC9.35□□□□□ -0.91
P20040 Gm43633-201ENSMUST00000202455 2330 ntBASIC9.35□□□□□ -0.91
P20040 Gm44106-201ENSMUST00000203153 1599 ntBASIC9.35□□□□□ -0.91
P20040 Gm7082-201ENSMUST00000209880 969 ntBASIC9.35□□□□□ -0.91
P20040 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
P20040 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
P20040 Gm9111-201ENSMUST00000219394 709 ntBASIC9.35□□□□□ -0.91
P20040 Gm32939-201ENSMUST00000222336 843 ntTSL 3 BASIC9.35□□□□□ -0.91
P20040 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
P20040 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
P20040 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
P20040 Olfr71-201ENSMUST00000055401 939 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
P20040 A430105I19Rik-201ENSMUST00000059997 4703 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
P20040 Hcst-201ENSMUST00000075062 442 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
P20040 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
P20040 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
P20040 Pofut1-207ENSMUST00000152390 4833 ntTSL 2 BASIC9.35□□□□□ -0.91
P20040 Il16-203ENSMUST00000145610 3183 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
P20040 Zfp780b-201ENSMUST00000081618 3004 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
P20040 Gm44798-201ENSMUST00000208123 2410 ntBASIC9.35□□□□□ -0.91
P20040 Slc22a14-204ENSMUST00000170400 2110 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
P20040 Sqor-202ENSMUST00000110506 1985 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
P20040 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC9.35□□□□□ -0.91
P20040 Gm21759-201ENSMUST00000178345 1828 ntBASIC9.35□□□□□ -0.91
P20040 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
P20040 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
P20040 Exo1-201ENSMUST00000039725 7796 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
P20040 Dcun1d2-202ENSMUST00000110838 2955 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
P20040 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC9.35□□□□□ -0.91
P20040 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC9.35□□□□□ -0.91
P20040 Wnt5a-202ENSMUST00000112272 3650 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
P20040 Gm11426-201ENSMUST00000125600 2220 ntTSL 2 BASIC9.35□□□□□ -0.91
P20040 Kif2b-201ENSMUST00000061019 2244 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
P20040 Gramd1b-214ENSMUST00000216821 7445 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
P20040 Fut10-201ENSMUST00000066173 3183 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
P20040 Gm16677-201ENSMUST00000181229 2174 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
P20040 Gm27174-201ENSMUST00000184493 2174 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
P20040 Gm37264-201ENSMUST00000194916 2192 ntBASIC9.34□□□□□ -0.91
P20040 Tmprss3-202ENSMUST00000114549 2872 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
P20040 5730403I07Rik-201ENSMUST00000183878 2033 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
P20040 Gm21039-201ENSMUST00000223359 2012 ntBASIC9.34□□□□□ -0.91
P20040 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
P20040 Fubp1-201ENSMUST00000106121 4525 ntAPPRIS P2 TSL 2 BASIC9.34□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms