Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Txk-203ENSMUST00000197313 2190 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Atf6F6VAN0 Sema4g-201ENSMUST00000026225 4548 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Atf6F6VAN0 Spert-201ENSMUST00000035243 1430 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Atf6F6VAN0 Tjp1-201ENSMUST00000032729 6102 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Atf6F6VAN0 Gpr155-204ENSMUST00000112044 4201 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Atf6F6VAN0 Rsph10b-203ENSMUST00000166847 2878 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Atf6F6VAN0 Ccar2-201ENSMUST00000035612 3725 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Atf6F6VAN0 Bex3-203ENSMUST00000113113 766 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Atf6F6VAN0 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Atf6F6VAN0 Gm15031-201ENSMUST00000121341 210 ntBASIC10.86□□□□□ -0.67
Atf6F6VAN0 Gm12208-201ENSMUST00000122004 163 ntBASIC10.86□□□□□ -0.67
Atf6F6VAN0 Mir1901-201ENSMUST00000122616 78 ntBASIC10.86□□□□□ -0.67
Atf6F6VAN0 Gm11465-201ENSMUST00000127942 435 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Atf6F6VAN0 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC10.86□□□□□ -0.67
Atf6F6VAN0 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC10.86□□□□□ -0.67
Atf6F6VAN0 Gm15911-201ENSMUST00000138992 809 ntTSL 3 BASIC10.86□□□□□ -0.67
Atf6F6VAN0 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Atf6F6VAN0 Gm25830-201ENSMUST00000158923 132 ntBASIC10.86□□□□□ -0.67
Atf6F6VAN0 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Atf6F6VAN0 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC10.86□□□□□ -0.67
Atf6F6VAN0 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Atf6F6VAN0 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Atf6F6VAN0 Gm3149-203ENSMUST00000179649 618 ntAPPRIS ALT2 TSL 2 BASIC10.86□□□□□ -0.67
Atf6F6VAN0 Klk1b15-ps-201ENSMUST00000206273 715 ntBASIC10.86□□□□□ -0.67
Atf6F6VAN0 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Atf6F6VAN0 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Atf6F6VAN0 Myl9-201ENSMUST00000088552 1128 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Atf6F6VAN0 Olfr169-201ENSMUST00000090062 942 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Atf6F6VAN0 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Atf6F6VAN0 Shroom2-201ENSMUST00000062317 6997 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Atf6F6VAN0 Hsd3b1-202ENSMUST00000107016 1855 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Atf6F6VAN0 Gm44740-201ENSMUST00000205603 1614 ntBASIC10.86□□□□□ -0.67
Atf6F6VAN0 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Atf6F6VAN0 Gm14667-201ENSMUST00000119448 1350 ntBASIC10.86□□□□□ -0.67
Atf6F6VAN0 Prkx-201ENSMUST00000036333 4146 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Atf6F6VAN0 Nufip2-204ENSMUST00000181023 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Atf6F6VAN0 Gm13583-202ENSMUST00000151931 1476 ntTSL 2 BASIC10.86□□□□□ -0.67
Atf6F6VAN0 2810454H06Rik-201ENSMUST00000189942 3148 ntBASIC10.86□□□□□ -0.67
Atf6F6VAN0 Pold1-201ENSMUST00000049343 3454 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Atf6F6VAN0 Cep112-201ENSMUST00000061287 3485 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Atf6F6VAN0 Myh13-201ENSMUST00000081911 5817 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Atf6F6VAN0 Col6a3-202ENSMUST00000097653 9001 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Atf6F6VAN0 Gm40634-201ENSMUST00000214129 2001 ntTSL 5 BASIC10.85□□□□□ -0.67
Atf6F6VAN0 Gm5159-201ENSMUST00000212733 1652 ntBASIC10.85□□□□□ -0.67
Atf6F6VAN0 Qtrt2-201ENSMUST00000023387 2838 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Atf6F6VAN0 Stx17-203ENSMUST00000107721 1771 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Atf6F6VAN0 Bbs7-201ENSMUST00000040148 2599 ntAPPRIS ALT1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Atf6F6VAN0 Kif3c-201ENSMUST00000020999 6791 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Atf6F6VAN0 Slc7a3-203ENSMUST00000113710 2750 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Atf6F6VAN0 Zfp14-201ENSMUST00000077787 1506 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Atf6F6VAN0 Rxfp2-201ENSMUST00000065745 2539 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Atf6F6VAN0 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Atf6F6VAN0 Ighv1-12-201ENSMUST00000103500 294 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Atf6F6VAN0 Gm25053-201ENSMUST00000103982 133 ntBASIC10.85□□□□□ -0.67
Atf6F6VAN0 Gm25922-201ENSMUST00000104281 130 ntBASIC10.85□□□□□ -0.67
Atf6F6VAN0 Ccdc32-203ENSMUST00000110834 828 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Atf6F6VAN0 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Atf6F6VAN0 Srpk1-202ENSMUST00000114767 445 ntTSL 3 BASIC10.85□□□□□ -0.67
Atf6F6VAN0 Gm13333-201ENSMUST00000119424 781 ntBASIC10.85□□□□□ -0.67
Atf6F6VAN0 Gm12950-201ENSMUST00000121683 417 ntBASIC10.85□□□□□ -0.67
Atf6F6VAN0 Gm14665-201ENSMUST00000122294 557 ntBASIC10.85□□□□□ -0.67
Atf6F6VAN0 Gm25318-201ENSMUST00000122554 314 ntBASIC10.85□□□□□ -0.67
Atf6F6VAN0 4921508D12Rik-201ENSMUST00000124095 1075 ntTSL 2 BASIC10.85□□□□□ -0.67
Atf6F6VAN0 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Atf6F6VAN0 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC10.85□□□□□ -0.67
Atf6F6VAN0 4933405E24Rik-201ENSMUST00000131019 1078 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Atf6F6VAN0 Gm24679-201ENSMUST00000158762 111 ntBASIC10.85□□□□□ -0.67
Atf6F6VAN0 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Atf6F6VAN0 Gm9135-201ENSMUST00000182963 990 ntBASIC10.85□□□□□ -0.67
Atf6F6VAN0 Gm9358-201ENSMUST00000183067 927 ntBASIC10.85□□□□□ -0.67
Atf6F6VAN0 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Atf6F6VAN0 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC10.85□□□□□ -0.67
Atf6F6VAN0 Gm19918-201ENSMUST00000194858 400 ntBASIC10.85□□□□□ -0.67
Atf6F6VAN0 Gm44387-201ENSMUST00000196298 145 ntBASIC10.85□□□□□ -0.67
Atf6F6VAN0 Gm31274-201ENSMUST00000197356 229 ntBASIC10.85□□□□□ -0.67
Atf6F6VAN0 Gm25053-202ENSMUST00000199731 132 ntBASIC10.85□□□□□ -0.67
Atf6F6VAN0 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC10.85□□□□□ -0.67
Atf6F6VAN0 Gm45071-201ENSMUST00000205353 571 ntBASIC10.85□□□□□ -0.67
Atf6F6VAN0 Gm44605-201ENSMUST00000206892 949 ntBASIC10.85□□□□□ -0.67
Atf6F6VAN0 Gm45388-201ENSMUST00000209922 1132 ntTSL 5 BASIC10.85□□□□□ -0.67
Atf6F6VAN0 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC10.85□□□□□ -0.67
Atf6F6VAN0 Gm9487-201ENSMUST00000216600 472 ntBASIC10.85□□□□□ -0.67
Atf6F6VAN0 Ormdl2-203ENSMUST00000219215 1051 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Atf6F6VAN0 Gm3619-201ENSMUST00000219947 775 ntBASIC10.85□□□□□ -0.67
Atf6F6VAN0 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Atf6F6VAN0 AC137950.2-201ENSMUST00000227127 1089 ntBASIC10.85□□□□□ -0.67
Atf6F6VAN0 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Atf6F6VAN0 Tctex1d1-201ENSMUST00000030248 977 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Atf6F6VAN0 Fam3b-201ENSMUST00000049721 853 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Atf6F6VAN0 Cib4-201ENSMUST00000065486 769 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Atf6F6VAN0 Rhox8-201ENSMUST00000071885 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Atf6F6VAN0 Gm37583-201ENSMUST00000195460 2487 ntBASIC10.85□□□□□ -0.67
Atf6F6VAN0 Gm37613-201ENSMUST00000195677 3580 ntBASIC10.85□□□□□ -0.67
Atf6F6VAN0 4933422A05Rik-201ENSMUST00000213706 1356 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Atf6F6VAN0 Actn2-201ENSMUST00000064204 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Atf6F6VAN0 C130013H08Rik-201ENSMUST00000197569 3692 ntBASIC10.85□□□□□ -0.67
Atf6F6VAN0 Nucks1-201ENSMUST00000062264 5998 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Atf6F6VAN0 Gm10827-201ENSMUST00000181897 2586 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Atf6F6VAN0 Gapdhs-203ENSMUST00000182634 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Atf6F6VAN0 Zfp804b-202ENSMUST00000200317 4430 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms