Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Trim13Q9CYB0 Dysf-203ENSMUST00000113818 6571 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trim13Q9CYB0 Stx16-201ENSMUST00000044638 3731 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Trim13Q9CYB0 Dgcr2-204ENSMUST00000117945 4003 ntAPPRIS ALT1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trim13Q9CYB0 P4ha1-201ENSMUST00000009789 4043 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trim13Q9CYB0 Slc34a2-201ENSMUST00000094787 4176 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trim13Q9CYB0 Nlrp12-201ENSMUST00000108653 6928 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Trim13Q9CYB0 Anln-201ENSMUST00000040912 4605 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trim13Q9CYB0 Pkd1l3-203ENSMUST00000212537 6576 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trim13Q9CYB0 Vps13b-201ENSMUST00000048646 13757 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Trim13Q9CYB0 Idua-202ENSMUST00000112563 3373 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trim13Q9CYB0 Gm43052-201ENSMUST00000201451 1628 ntBASIC9.78□□□□□ -0.84
Trim13Q9CYB0 Cxcr2-201ENSMUST00000027372 2220 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Trim13Q9CYB0 Pax6-204ENSMUST00000111083 2370 ntAPPRIS ALT1 TSL 5 BASIC9.78□□□□□ -0.84
Trim13Q9CYB0 Gpr39-201ENSMUST00000027581 2691 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trim13Q9CYB0 Cux1-207ENSMUST00000176216 2821 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Trim13Q9CYB0 Vps8-202ENSMUST00000096192 4942 ntTSL 5 BASIC9.78□□□□□ -0.84
Trim13Q9CYB0 Stx8-201ENSMUST00000021285 4394 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Trim13Q9CYB0 Cdyl-201ENSMUST00000075220 3470 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
Trim13Q9CYB0 Fut10-201ENSMUST00000066173 3183 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.84
Trim13Q9CYB0 Btc-201ENSMUST00000121044 2876 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Trim13Q9CYB0 Sh3bgrl-201ENSMUST00000033598 2882 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Trim13Q9CYB0 Zfp672-201ENSMUST00000057836 2862 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Trim13Q9CYB0 Tuft1-204ENSMUST00000196733 2555 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.84
Trim13Q9CYB0 Gm37516-201ENSMUST00000192593 1954 ntBASIC9.77□□□□□ -0.84
Trim13Q9CYB0 Aox2-201ENSMUST00000114366 5771 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Trim13Q9CYB0 Gm32219-201ENSMUST00000221234 1819 ntTSL 5 BASIC9.77□□□□□ -0.84
Trim13Q9CYB0 Nedd4-201ENSMUST00000034740 5499 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Trim13Q9CYB0 Gm498-202ENSMUST00000152910 1507 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.84
Trim13Q9CYB0 Uroc1-201ENSMUST00000046128 3370 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Trim13Q9CYB0 Tulp4-209ENSMUST00000149756 8784 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
Trim13Q9CYB0 Adcy3-201ENSMUST00000020984 4348 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trim13Q9CYB0 Atp1a3-202ENSMUST00000102858 3895 ntTSL 2 BASIC9.77□□□□□ -0.85
Trim13Q9CYB0 Cdh18-207ENSMUST00000226693 2165 ntBASIC9.77□□□□□ -0.85
Trim13Q9CYB0 Cfap53-201ENSMUST00000114895 1888 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trim13Q9CYB0 Rbm27-202ENSMUST00000091920 6266 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trim13Q9CYB0 Pde10a-211ENSMUST00000149440 4897 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trim13Q9CYB0 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trim13Q9CYB0 Celf2-224ENSMUST00000182879 2223 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Trim13Q9CYB0 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Trim13Q9CYB0 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC9.77□□□□□ -0.85
Trim13Q9CYB0 Gm9133-201ENSMUST00000118289 540 ntBASIC9.77□□□□□ -0.85
Trim13Q9CYB0 Gm12566-201ENSMUST00000121479 359 ntBASIC9.77□□□□□ -0.85
Trim13Q9CYB0 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trim13Q9CYB0 Gm15486-201ENSMUST00000135147 604 ntTSL 3 BASIC9.77□□□□□ -0.85
Trim13Q9CYB0 Platr20-202ENSMUST00000143209 937 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Trim13Q9CYB0 Gm7666-201ENSMUST00000146631 819 ntBASIC9.77□□□□□ -0.85
Trim13Q9CYB0 Gm25661-201ENSMUST00000157704 296 ntBASIC9.77□□□□□ -0.85
Trim13Q9CYB0 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC9.77□□□□□ -0.85
Trim13Q9CYB0 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC9.77□□□□□ -0.85
Trim13Q9CYB0 AC159103.1-201ENSMUST00000228325 429 ntBASIC9.77□□□□□ -0.85
Trim13Q9CYB0 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trim13Q9CYB0 Clrn1-201ENSMUST00000051408 1204 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trim13Q9CYB0 Gm23105-201ENSMUST00000083719 134 ntBASIC9.77□□□□□ -0.85
Trim13Q9CYB0 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trim13Q9CYB0 Cage1-203ENSMUST00000110233 2875 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Trim13Q9CYB0 Pkd1l2-202ENSMUST00000109093 7389 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
Trim13Q9CYB0 Pkd1l2-201ENSMUST00000098375 7386 ntAPPRIS P2 TSL 5 BASIC9.77□□□□□ -0.85
Trim13Q9CYB0 Tcn2-205ENSMUST00000109991 1943 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Trim13Q9CYB0 Adamtsl3-203ENSMUST00000173287 7249 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Trim13Q9CYB0 Atg4b-201ENSMUST00000027502 4173 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trim13Q9CYB0 Rab11b-201ENSMUST00000057373 6109 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trim13Q9CYB0 Fcrl1-202ENSMUST00000163661 1649 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trim13Q9CYB0 AI606181-201ENSMUST00000099454 2796 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
Trim13Q9CYB0 Gm16982-201ENSMUST00000181275 2620 ntTSL 2 BASIC9.77□□□□□ -0.85
Trim13Q9CYB0 Lingo1-206ENSMUST00000210032 3627 ntTSL 5 BASIC9.77□□□□□ -0.85
Trim13Q9CYB0 Cap2-202ENSMUST00000119341 2454 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Trim13Q9CYB0 Pds5a-201ENSMUST00000031104 4146 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Trim13Q9CYB0 Palm2-201ENSMUST00000102904 2958 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trim13Q9CYB0 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Trim13Q9CYB0 Gm38025-201ENSMUST00000193926 2308 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Trim13Q9CYB0 Gripap1-201ENSMUST00000065932 3156 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trim13Q9CYB0 Adat1-202ENSMUST00000120457 1677 ntTSL 5 BASIC9.77□□□□□ -0.85
Trim13Q9CYB0 Amer3-201ENSMUST00000052670 4392 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trim13Q9CYB0 Hcfc1-201ENSMUST00000033761 8138 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trim13Q9CYB0 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trim13Q9CYB0 Lrrc61-202ENSMUST00000114545 2913 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trim13Q9CYB0 Vangl1-208ENSMUST00000168312 1740 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Trim13Q9CYB0 AC242690.1-202ENSMUST00000214616 1742 ntTSL 5 BASIC9.76□□□□□ -0.85
Trim13Q9CYB0 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trim13Q9CYB0 Ndrg4-201ENSMUST00000041318 3101 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Trim13Q9CYB0 Gm37567-201ENSMUST00000193241 2279 ntBASIC9.76□□□□□ -0.85
Trim13Q9CYB0 Gm10465-201ENSMUST00000223133 3334 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Trim13Q9CYB0 Baat-201ENSMUST00000043056 1941 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trim13Q9CYB0 Hcar2-201ENSMUST00000057145 1930 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
Trim13Q9CYB0 Ctnnd1-220ENSMUST00000111694 6362 ntAPPRIS P5 TSL 5 BASIC9.76□□□□□ -0.85
Trim13Q9CYB0 Supt20-201ENSMUST00000029315 2112 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Trim13Q9CYB0 Olfm3-202ENSMUST00000081752 4647 ntAPPRIS ALT1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trim13Q9CYB0 Bfar-201ENSMUST00000023365 3003 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trim13Q9CYB0 Gm12097-201ENSMUST00000121523 1414 ntBASIC9.76□□□□□ -0.85
Trim13Q9CYB0 Vmn1r199-204ENSMUST00000227846 5523 ntAPPRIS ALT2 BASIC9.76□□□□□ -0.85
Trim13Q9CYB0 Slc45a3-202ENSMUST00000177943 3212 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trim13Q9CYB0 Cyp7b1-201ENSMUST00000035625 2166 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trim13Q9CYB0 4930432K21Rik-201ENSMUST00000093375 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trim13Q9CYB0 Htr2c-201ENSMUST00000036303 4747 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trim13Q9CYB0 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trim13Q9CYB0 Gm8312-201ENSMUST00000119380 618 ntBASIC9.76□□□□□ -0.85
Trim13Q9CYB0 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC9.76□□□□□ -0.85
Trim13Q9CYB0 Gm11836-201ENSMUST00000121022 441 ntBASIC9.76□□□□□ -0.85
Trim13Q9CYB0 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms