Protein–RNA interactions for Protein: Q91VD8

Pcdhb17, MCG141290, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb17Q91VD8 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhb17Q91VD8 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhb17Q91VD8 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhb17Q91VD8 Gm43785-201ENSMUST00000201036 1345 ntBASIC12.01□□□□□ -0.49
Pcdhb17Q91VD8 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhb17Q91VD8 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC12.01□□□□□ -0.49
Pcdhb17Q91VD8 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC12.01□□□□□ -0.49
Pcdhb17Q91VD8 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhb17Q91VD8 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhb17Q91VD8 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhb17Q91VD8 Gm44190-201ENSMUST00000205083 1401 ntBASIC12.01□□□□□ -0.49
Pcdhb17Q91VD8 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC12.01□□□□□ -0.49
Pcdhb17Q91VD8 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhb17Q91VD8 EU599041-203ENSMUST00000205748 1492 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhb17Q91VD8 AC135083.2-201ENSMUST00000228599 1456 ntBASIC12.01□□□□□ -0.49
Pcdhb17Q91VD8 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhb17Q91VD8 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC12.01□□□□□ -0.49
Pcdhb17Q91VD8 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhb17Q91VD8 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhb17Q91VD8 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhb17Q91VD8 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhb17Q91VD8 Cbx3-203ENSMUST00000114445 1585 ntTSL 5 BASIC12.01□□□□□ -0.49
Pcdhb17Q91VD8 Omd-201ENSMUST00000065494 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhb17Q91VD8 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhb17Q91VD8 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhb17Q91VD8 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhb17Q91VD8 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhb17Q91VD8 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pcdhb17Q91VD8 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC12□□□□□ -0.49
Pcdhb17Q91VD8 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhb17Q91VD8 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhb17Q91VD8 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12□□□□□ -0.49
Pcdhb17Q91VD8 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhb17Q91VD8 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC12□□□□□ -0.49
Pcdhb17Q91VD8 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Pcdhb17Q91VD8 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhb17Q91VD8 AC154639.1-201ENSMUST00000224393 2849 ntBASIC12□□□□□ -0.49
Pcdhb17Q91VD8 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC12□□□□□ -0.49
Pcdhb17Q91VD8 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Pcdhb17Q91VD8 Snord70-201ENSMUST00000104157 87 ntBASIC12□□□□□ -0.49
Pcdhb17Q91VD8 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhb17Q91VD8 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pcdhb17Q91VD8 Kcnj13-201ENSMUST00000113212 1270 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Pcdhb17Q91VD8 Cryzl1-202ENSMUST00000114023 1154 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhb17Q91VD8 Lypla1-202ENSMUST00000115529 930 ntTSL 2 BASIC12□□□□□ -0.49
Pcdhb17Q91VD8 Rpl35-ps1-201ENSMUST00000118070 372 ntBASIC12□□□□□ -0.49
Pcdhb17Q91VD8 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC12□□□□□ -0.49
Pcdhb17Q91VD8 Gm15352-201ENSMUST00000118696 270 ntBASIC12□□□□□ -0.49
Pcdhb17Q91VD8 Olfr999-ps1-201ENSMUST00000122319 949 ntBASIC12□□□□□ -0.49
Pcdhb17Q91VD8 Gm45591-201ENSMUST00000129058 843 ntTSL 3 BASIC12□□□□□ -0.49
Pcdhb17Q91VD8 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhb17Q91VD8 Gm12171-201ENSMUST00000150895 1257 ntTSL 5 BASIC12□□□□□ -0.49
Pcdhb17Q91VD8 Gm17091-201ENSMUST00000163248 357 ntBASIC12□□□□□ -0.49
Pcdhb17Q91VD8 Zfp60-208ENSMUST00000167955 2115 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Pcdhb17Q91VD8 Gm28156-201ENSMUST00000187880 1136 ntTSL 5 BASIC12□□□□□ -0.49
Pcdhb17Q91VD8 1700063D05Rik-203ENSMUST00000191461 666 ntTSL 2 BASIC12□□□□□ -0.49
Pcdhb17Q91VD8 Gm42850-201ENSMUST00000202094 201 ntBASIC12□□□□□ -0.49
Pcdhb17Q91VD8 Gm32916-201ENSMUST00000207884 935 ntTSL 5 BASIC12□□□□□ -0.49
Pcdhb17Q91VD8 Gm45745-201ENSMUST00000211447 1180 ntBASIC12□□□□□ -0.49
Pcdhb17Q91VD8 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC12□□□□□ -0.49
Pcdhb17Q91VD8 Gm32300-201ENSMUST00000221735 515 ntBASIC12□□□□□ -0.49
Pcdhb17Q91VD8 AC166358.6-201ENSMUST00000221834 1206 ntBASIC12□□□□□ -0.49
Pcdhb17Q91VD8 CT025603.4-201ENSMUST00000225777 413 ntBASIC12□□□□□ -0.49
Pcdhb17Q91VD8 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhb17Q91VD8 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhb17Q91VD8 Rangap1-201ENSMUST00000052374 2954 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhb17Q91VD8 Olfr1462-201ENSMUST00000076832 924 ntAPPRIS P1 BASIC12□□□□□ -0.49
Pcdhb17Q91VD8 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC12□□□□□ -0.49
Pcdhb17Q91VD8 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pcdhb17Q91VD8 Gm20679-201ENSMUST00000177285 1402 ntBASIC12□□□□□ -0.49
Pcdhb17Q91VD8 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhb17Q91VD8 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhb17Q91VD8 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhb17Q91VD8 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pcdhb17Q91VD8 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pcdhb17Q91VD8 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhb17Q91VD8 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhb17Q91VD8 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC12□□□□□ -0.49
Pcdhb17Q91VD8 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC12□□□□□ -0.49
Pcdhb17Q91VD8 Zfp934-208ENSMUST00000222429 1653 ntTSL 3 BASIC12□□□□□ -0.49
Pcdhb17Q91VD8 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhb17Q91VD8 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC12□□□□□ -0.49
Pcdhb17Q91VD8 CT009489.1-201ENSMUST00000227740 1893 ntBASIC12□□□□□ -0.49
Pcdhb17Q91VD8 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhb17Q91VD8 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhb17Q91VD8 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhb17Q91VD8 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Pcdhb17Q91VD8 Nudt18-202ENSMUST00000228554 3619 ntBASIC11.99□□□□□ -0.49
Pcdhb17Q91VD8 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhb17Q91VD8 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhb17Q91VD8 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhb17Q91VD8 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhb17Q91VD8 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhb17Q91VD8 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhb17Q91VD8 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Pcdhb17Q91VD8 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhb17Q91VD8 Gm4596-201ENSMUST00000117197 442 ntBASIC11.99□□□□□ -0.49
Pcdhb17Q91VD8 Rhox11-ps2-201ENSMUST00000117962 451 ntBASIC11.99□□□□□ -0.49
Pcdhb17Q91VD8 Gm13408-201ENSMUST00000119822 798 ntBASIC11.99□□□□□ -0.49
Pcdhb17Q91VD8 Gm12459-201ENSMUST00000120659 356 ntBASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 80.4 ms