Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 CT025694.1-201ENSMUST00000226188 934 ntBASIC10.41□□□□□ -0.74
Ccdc28bQ8CEG5 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ccdc28bQ8CEG5 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Ccdc28bQ8CEG5 A1bg-201ENSMUST00000096418 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ccdc28bQ8CEG5 Lonp2-203ENSMUST00000122188 2372 ntTSL 2 BASIC10.41□□□□□ -0.74
Ccdc28bQ8CEG5 Ube2l3-202ENSMUST00000115699 2906 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Ccdc28bQ8CEG5 Olfr169-204ENSMUST00000216070 2328 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Ccdc28bQ8CEG5 Rnf121-201ENSMUST00000089052 2344 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Ccdc28bQ8CEG5 Nt5c1b-217ENSMUST00000219826 2023 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Ccdc28bQ8CEG5 Qars-201ENSMUST00000006838 2800 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ccdc28bQ8CEG5 Bcl9l-203ENSMUST00000218183 6771 ntAPPRIS P2 TSL 5 BASIC10.41□□□□□ -0.74
Ccdc28bQ8CEG5 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ccdc28bQ8CEG5 Src-205ENSMUST00000109533 3813 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ccdc28bQ8CEG5 Slc23a1-201ENSMUST00000025212 3026 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ccdc28bQ8CEG5 Tor1aip2-204ENSMUST00000111754 2491 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Ccdc28bQ8CEG5 Cd177-201ENSMUST00000063956 2714 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ccdc28bQ8CEG5 Nfia-203ENSMUST00000092532 9382 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Ccdc28bQ8CEG5 A330032B11Rik-201ENSMUST00000180609 1919 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Ccdc28bQ8CEG5 Galnt1-201ENSMUST00000000430 3977 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ccdc28bQ8CEG5 Fgf6-201ENSMUST00000000187 4657 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Ccdc28bQ8CEG5 Ufsp2-201ENSMUST00000034051 1640 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Ccdc28bQ8CEG5 Anks1b-210ENSMUST00000182113 3553 ntTSL 5 BASIC10.4□□□□□ -0.74
Ccdc28bQ8CEG5 Ralgps2-203ENSMUST00000171292 3346 ntAPPRIS P3 TSL 5 BASIC10.4□□□□□ -0.74
Ccdc28bQ8CEG5 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Ccdc28bQ8CEG5 Tmem106a-201ENSMUST00000039581 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Ccdc28bQ8CEG5 Plxdc2-201ENSMUST00000028081 6947 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Ccdc28bQ8CEG5 Ccdc186-202ENSMUST00000118592 6445 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Ccdc28bQ8CEG5 Ar-201ENSMUST00000052837 10048 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Ccdc28bQ8CEG5 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Ccdc28bQ8CEG5 Fgd1-202ENSMUST00000112685 3240 ntTSL 5 BASIC10.4□□□□□ -0.74
Ccdc28bQ8CEG5 Ccpg1-202ENSMUST00000085350 2969 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Ccdc28bQ8CEG5 Gm31135-201ENSMUST00000208460 1782 ntTSL 5 BASIC10.4□□□□□ -0.74
Ccdc28bQ8CEG5 Fbxo38-201ENSMUST00000048688 4388 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Ccdc28bQ8CEG5 Pde2a-204ENSMUST00000209537 4100 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Ccdc28bQ8CEG5 Slc27a6-201ENSMUST00000025500 2485 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Ccdc28bQ8CEG5 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Ccdc28bQ8CEG5 Aldoa-202ENSMUST00000087566 1549 ntTSL 5 BASIC10.4□□□□□ -0.74
Ccdc28bQ8CEG5 Mir680-2-201ENSMUST00000102163 110 ntBASIC10.4□□□□□ -0.74
Ccdc28bQ8CEG5 Gm23251-201ENSMUST00000103773 110 ntBASIC10.4□□□□□ -0.74
Ccdc28bQ8CEG5 Gm6506-201ENSMUST00000119775 1136 ntBASIC10.4□□□□□ -0.74
Ccdc28bQ8CEG5 Gm13284-201ENSMUST00000121020 547 ntBASIC10.4□□□□□ -0.74
Ccdc28bQ8CEG5 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Ccdc28bQ8CEG5 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Ccdc28bQ8CEG5 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Ccdc28bQ8CEG5 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC10.4□□□□□ -0.74
Ccdc28bQ8CEG5 9530062K07Rik-201ENSMUST00000203332 787 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Ccdc28bQ8CEG5 Gm7395-201ENSMUST00000216059 1045 ntBASIC10.4□□□□□ -0.74
Ccdc28bQ8CEG5 AC124581.2-201ENSMUST00000225459 282 ntBASIC10.4□□□□□ -0.74
Ccdc28bQ8CEG5 AC122035.1-201ENSMUST00000227576 1016 ntBASIC10.4□□□□□ -0.74
Ccdc28bQ8CEG5 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Ccdc28bQ8CEG5 9030619P08Rik-201ENSMUST00000096397 857 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Ccdc28bQ8CEG5 Usp45-201ENSMUST00000040429 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Ccdc28bQ8CEG5 4930571K23Rik-201ENSMUST00000166958 2153 ntBASIC10.4□□□□□ -0.74
Ccdc28bQ8CEG5 Srgap2-204ENSMUST00000186543 3533 ntTSL 5 BASIC10.4□□□□□ -0.74
Ccdc28bQ8CEG5 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC10.4□□□□□ -0.74
Ccdc28bQ8CEG5 Plpbp-203ENSMUST00000209525 5767 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Ccdc28bQ8CEG5 Ptpn7-201ENSMUST00000049449 3261 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Ccdc28bQ8CEG5 Ehmt1-202ENSMUST00000091348 4615 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Ccdc28bQ8CEG5 Traf7-215ENSMUST00000176652 3003 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Ccdc28bQ8CEG5 5330439K02Rik-201ENSMUST00000180953 2312 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Ccdc28bQ8CEG5 Slc13a4-201ENSMUST00000031868 3427 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Ccdc28bQ8CEG5 Cpsf3-211ENSMUST00000222968 1858 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Ccdc28bQ8CEG5 Gm10390-202ENSMUST00000181905 4269 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Ccdc28bQ8CEG5 Slc18a2-201ENSMUST00000026084 3803 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Ccdc28bQ8CEG5 Cops3-201ENSMUST00000019517 1646 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Ccdc28bQ8CEG5 Gm32552-201ENSMUST00000217849 2291 ntTSL 5 BASIC10.4□□□□□ -0.75
Ccdc28bQ8CEG5 Gimap8-203ENSMUST00000203509 3138 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Ccdc28bQ8CEG5 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC10.4□□□□□ -0.75
Ccdc28bQ8CEG5 Amer3-201ENSMUST00000052670 4392 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Ccdc28bQ8CEG5 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC10.39□□□□□ -0.75
Ccdc28bQ8CEG5 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC10.39□□□□□ -0.75
Ccdc28bQ8CEG5 Vmn1r38-201ENSMUST00000226457 3462 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Ccdc28bQ8CEG5 Cbx3-203ENSMUST00000114445 1585 ntTSL 5 BASIC10.39□□□□□ -0.75
Ccdc28bQ8CEG5 Gm15519-201ENSMUST00000120088 1566 ntBASIC10.39□□□□□ -0.75
Ccdc28bQ8CEG5 Utp14b-202ENSMUST00000151622 3685 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ccdc28bQ8CEG5 Grik1-211ENSMUST00000228188 3221 ntBASIC10.39□□□□□ -0.75
Ccdc28bQ8CEG5 Bbs7-201ENSMUST00000040148 2599 ntAPPRIS ALT1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ccdc28bQ8CEG5 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ccdc28bQ8CEG5 Polq-202ENSMUST00000071452 7290 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Ccdc28bQ8CEG5 Lnpk-201ENSMUST00000064503 3195 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ccdc28bQ8CEG5 Celf4-202ENSMUST00000115816 3995 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ccdc28bQ8CEG5 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ccdc28bQ8CEG5 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ccdc28bQ8CEG5 Cabin1-201ENSMUST00000001712 7417 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Ccdc28bQ8CEG5 Prnd-201ENSMUST00000110169 1918 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ccdc28bQ8CEG5 Epb41l4a-201ENSMUST00000025234 3853 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ccdc28bQ8CEG5 Utp6-201ENSMUST00000043152 3877 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ccdc28bQ8CEG5 Acot12-201ENSMUST00000022120 3058 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ccdc28bQ8CEG5 Txk-206ENSMUST00000198464 2271 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Ccdc28bQ8CEG5 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Ccdc28bQ8CEG5 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Ccdc28bQ8CEG5 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
Ccdc28bQ8CEG5 Gm15285-201ENSMUST00000119271 473 ntBASIC10.39□□□□□ -0.75
Ccdc28bQ8CEG5 Gm12856-201ENSMUST00000119471 1293 ntBASIC10.39□□□□□ -0.75
Ccdc28bQ8CEG5 Mir1893-201ENSMUST00000122565 83 ntBASIC10.39□□□□□ -0.75
Ccdc28bQ8CEG5 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Ccdc28bQ8CEG5 Gng2-203ENSMUST00000159073 960 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
Ccdc28bQ8CEG5 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ccdc28bQ8CEG5 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Ccdc28bQ8CEG5 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC10.39□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 68.4 ms