Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Sh3kbp1-204ENSMUST00000112451 3914 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Lysmd4Q8CC84 Galnt16-201ENSMUST00000021558 3922 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Lysmd4Q8CC84 8030423F21Rik-201ENSMUST00000064097 2851 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Lysmd4Q8CC84 Micu1-212ENSMUST00000179709 1814 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Lysmd4Q8CC84 Gm4726-201ENSMUST00000135604 736 ntBASIC9.41□□□□□ -0.9
Lysmd4Q8CC84 Aamdc-207ENSMUST00000138060 467 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Lysmd4Q8CC84 Aamdc-209ENSMUST00000144858 380 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Lysmd4Q8CC84 Gm6019-201ENSMUST00000148369 736 ntBASIC9.41□□□□□ -0.9
Lysmd4Q8CC84 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC9.41□□□□□ -0.9
Lysmd4Q8CC84 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC9.41□□□□□ -0.9
Lysmd4Q8CC84 Gm16894-201ENSMUST00000181756 842 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Lysmd4Q8CC84 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Lysmd4Q8CC84 Gm3551-201ENSMUST00000190750 664 ntBASIC9.41□□□□□ -0.9
Lysmd4Q8CC84 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC9.41□□□□□ -0.9
Lysmd4Q8CC84 A830092H15Rik-202ENSMUST00000195446 649 ntTSL 3 BASIC9.41□□□□□ -0.9
Lysmd4Q8CC84 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC9.41□□□□□ -0.9
Lysmd4Q8CC84 Gm8170-201ENSMUST00000218581 945 ntBASIC9.41□□□□□ -0.9
Lysmd4Q8CC84 AC157650.1-201ENSMUST00000224582 610 ntBASIC9.41□□□□□ -0.9
Lysmd4Q8CC84 Olfr963-201ENSMUST00000073433 936 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Lysmd4Q8CC84 Gm6040-201ENSMUST00000095430 857 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Lysmd4Q8CC84 Adra1a-205ENSMUST00000161339 2788 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Lysmd4Q8CC84 Rasal1-205ENSMUST00000156722 3251 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Lysmd4Q8CC84 5033428I22Rik-204ENSMUST00000210633 6652 ntTSL 5 BASIC9.41□□□□□ -0.9
Lysmd4Q8CC84 Olfr742-203ENSMUST00000217437 2244 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Lysmd4Q8CC84 Gm13128-201ENSMUST00000105751 1745 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Lysmd4Q8CC84 Kcne1-201ENSMUST00000051705 3155 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Lysmd4Q8CC84 Tom1l2-203ENSMUST00000093048 4864 ntTSL 5 BASIC9.41□□□□□ -0.9
Lysmd4Q8CC84 Tmem63c-203ENSMUST00000146292 3455 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Lysmd4Q8CC84 Card14-202ENSMUST00000106250 4206 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Lysmd4Q8CC84 Sfi1-218ENSMUST00000153425 3759 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Lysmd4Q8CC84 Gm11100-201ENSMUST00000112652 1951 ntTSL 5 BASIC9.41□□□□□ -0.9
Lysmd4Q8CC84 Serpinb9c-201ENSMUST00000021837 1902 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Lysmd4Q8CC84 Peg10-203ENSMUST00000176551 6567 ntTSL 2 BASIC9.4□□□□□ -0.9
Lysmd4Q8CC84 Zfp54-201ENSMUST00000007884 2300 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Lysmd4Q8CC84 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC9.4□□□□□ -0.9
Lysmd4Q8CC84 Prdx3-201ENSMUST00000025961 1478 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Lysmd4Q8CC84 Acot11-202ENSMUST00000102762 5689 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
Lysmd4Q8CC84 Thsd4-201ENSMUST00000034829 4816 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Lysmd4Q8CC84 Smarca5-ps-201ENSMUST00000121843 3123 ntBASIC9.4□□□□□ -0.9
Lysmd4Q8CC84 Itgal-203ENSMUST00000118405 3909 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Lysmd4Q8CC84 Nupl1-202ENSMUST00000041905 3913 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Lysmd4Q8CC84 Zcchc8-201ENSMUST00000031376 4286 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Lysmd4Q8CC84 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Lysmd4Q8CC84 Gm5099-201ENSMUST00000194892 1848 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Lysmd4Q8CC84 Tal2-201ENSMUST00000030124 2971 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Lysmd4Q8CC84 Dhcr7-202ENSMUST00000124340 2556 ntAPPRIS P2 TSL 5 BASIC9.4□□□□□ -0.9
Lysmd4Q8CC84 Dopey2-201ENSMUST00000045004 7319 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Lysmd4Q8CC84 N4bp2-201ENSMUST00000087264 5308 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Lysmd4Q8CC84 Fbxo40-202ENSMUST00000114806 2518 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Lysmd4Q8CC84 Gm35363-201ENSMUST00000209330 1317 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Lysmd4Q8CC84 Pcdha6-201ENSMUST00000193389 4653 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Lysmd4Q8CC84 Idua-201ENSMUST00000071650 3536 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Lysmd4Q8CC84 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Lysmd4Q8CC84 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC9.4□□□□□ -0.9
Lysmd4Q8CC84 Gm15432-201ENSMUST00000121106 195 ntBASIC9.4□□□□□ -0.9
Lysmd4Q8CC84 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC9.4□□□□□ -0.9
Lysmd4Q8CC84 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Lysmd4Q8CC84 Gm10051-201ENSMUST00000145209 414 ntBASIC9.4□□□□□ -0.9
Lysmd4Q8CC84 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Lysmd4Q8CC84 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Lysmd4Q8CC84 Rian-213ENSMUST00000182981 1219 ntTSL 5 BASIC9.4□□□□□ -0.9
Lysmd4Q8CC84 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Lysmd4Q8CC84 Gm29155-201ENSMUST00000185910 269 ntBASIC9.4□□□□□ -0.9
Lysmd4Q8CC84 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC9.4□□□□□ -0.9
Lysmd4Q8CC84 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC9.4□□□□□ -0.9
Lysmd4Q8CC84 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC9.4□□□□□ -0.9
Lysmd4Q8CC84 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC9.4□□□□□ -0.9
Lysmd4Q8CC84 Gm2253-201ENSMUST00000211775 414 ntBASIC9.4□□□□□ -0.9
Lysmd4Q8CC84 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Lysmd4Q8CC84 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC9.4□□□□□ -0.9
Lysmd4Q8CC84 2210039B01Rik-201ENSMUST00000222490 1044 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Lysmd4Q8CC84 AC154435.1-201ENSMUST00000223938 959 ntBASIC9.4□□□□□ -0.9
Lysmd4Q8CC84 AC154257.1-202ENSMUST00000224729 843 ntBASIC9.4□□□□□ -0.9
Lysmd4Q8CC84 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Lysmd4Q8CC84 Nt5c1b-203ENSMUST00000143739 1570 ntTSL 2 BASIC9.4□□□□□ -0.9
Lysmd4Q8CC84 Gm8684-201ENSMUST00000195078 1564 ntBASIC9.4□□□□□ -0.9
Lysmd4Q8CC84 Ptpn7-202ENSMUST00000167080 2945 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Lysmd4Q8CC84 Actn2-203ENSMUST00000168193 2920 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Lysmd4Q8CC84 Slc34a2-201ENSMUST00000094787 4176 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Lysmd4Q8CC84 Myadm-201ENSMUST00000096744 2814 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Lysmd4Q8CC84 Fam222b-203ENSMUST00000155571 3358 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Lysmd4Q8CC84 Son-204ENSMUST00000119368 7529 ntTSL 5 BASIC9.4□□□□□ -0.91
Lysmd4Q8CC84 Zfp287-203ENSMUST00000128370 2062 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Lysmd4Q8CC84 Tmigd1-202ENSMUST00000102495 1427 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Lysmd4Q8CC84 Trp63-207ENSMUST00000115308 2380 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Lysmd4Q8CC84 Tyw3-204ENSMUST00000170461 4270 ntTSL 5 BASIC9.39□□□□□ -0.91
Lysmd4Q8CC84 Gm20796-201ENSMUST00000180355 5838 ntBASIC9.39□□□□□ -0.91
Lysmd4Q8CC84 Sall2-201ENSMUST00000058326 5147 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Lysmd4Q8CC84 Micalcl-203ENSMUST00000106645 2309 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Lysmd4Q8CC84 Harbi1-201ENSMUST00000090608 2308 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Lysmd4Q8CC84 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Lysmd4Q8CC84 Gm42741-201ENSMUST00000201340 2278 ntBASIC9.39□□□□□ -0.91
Lysmd4Q8CC84 Catsperd-201ENSMUST00000112979 2565 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Lysmd4Q8CC84 Gm9271-201ENSMUST00000185988 2580 ntBASIC9.39□□□□□ -0.91
Lysmd4Q8CC84 Pard3-201ENSMUST00000026921 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Lysmd4Q8CC84 Dnmt1-202ENSMUST00000177754 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Lysmd4Q8CC84 Oprm1-213ENSMUST00000105604 1616 ntAPPRIS ALT1 TSL 5 BASIC9.39□□□□□ -0.91
Lysmd4Q8CC84 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC9.39□□□□□ -0.91
Lysmd4Q8CC84 Gm26673-201ENSMUST00000181126 3377 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Lysmd4Q8CC84 Pcdh11x-202ENSMUST00000113358 8607 ntAPPRIS P2 TSL 5 BASIC9.39□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms