Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Glmp-207ENSMUST00000176425 960 ntTSL 5 BASIC10.72□□□□□ -0.69
Sh3rf2Q8BZT2 1500015A07Rik-202ENSMUST00000184530 423 ntTSL 3 BASIC10.72□□□□□ -0.69
Sh3rf2Q8BZT2 Gm28651-201ENSMUST00000185335 644 ntTSL 3 BASIC10.72□□□□□ -0.69
Sh3rf2Q8BZT2 Tex35-206ENSMUST00000187546 856 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Sh3rf2Q8BZT2 Gm29157-201ENSMUST00000188753 612 ntBASIC10.72□□□□□ -0.69
Sh3rf2Q8BZT2 Clec2h-202ENSMUST00000204416 386 ntTSL 3 BASIC10.72□□□□□ -0.69
Sh3rf2Q8BZT2 Fxyd1-214ENSMUST00000206328 545 ntAPPRIS P1 TSL 3 BASIC10.72□□□□□ -0.69
Sh3rf2Q8BZT2 C230062I16Rik-203ENSMUST00000208015 648 ntTSL 3 BASIC10.72□□□□□ -0.69
Sh3rf2Q8BZT2 Gm45363-201ENSMUST00000210196 1294 ntBASIC10.72□□□□□ -0.69
Sh3rf2Q8BZT2 Gm31786-201ENSMUST00000212305 564 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Sh3rf2Q8BZT2 Pigx-212ENSMUST00000215073 765 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sh3rf2Q8BZT2 Madcam1-202ENSMUST00000217748 944 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sh3rf2Q8BZT2 AC102523.1-201ENSMUST00000228706 1144 ntBASIC10.72□□□□□ -0.69
Sh3rf2Q8BZT2 Klk1b22-201ENSMUST00000077528 855 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sh3rf2Q8BZT2 Gm22341-201ENSMUST00000083775 129 ntBASIC10.72□□□□□ -0.69
Sh3rf2Q8BZT2 Mrps14-202ENSMUST00000097193 787 ntTSL 2 BASIC10.72□□□□□ -0.69
Sh3rf2Q8BZT2 Olfr1219-201ENSMUST00000099797 936 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Sh3rf2Q8BZT2 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sh3rf2Q8BZT2 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sh3rf2Q8BZT2 Gm8725-201ENSMUST00000221829 1333 ntBASIC10.72□□□□□ -0.69
Sh3rf2Q8BZT2 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sh3rf2Q8BZT2 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sh3rf2Q8BZT2 Gm44975-201ENSMUST00000207435 1390 ntBASIC10.72□□□□□ -0.69
Sh3rf2Q8BZT2 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sh3rf2Q8BZT2 AC166361.2-201ENSMUST00000219269 1415 ntBASIC10.72□□□□□ -0.69
Sh3rf2Q8BZT2 Lpo-201ENSMUST00000103177 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sh3rf2Q8BZT2 Fam90a1b-201ENSMUST00000044989 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sh3rf2Q8BZT2 Nxpe1-ps-201ENSMUST00000209981 1454 ntBASIC10.72□□□□□ -0.69
Sh3rf2Q8BZT2 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC10.72□□□□□ -0.69
Sh3rf2Q8BZT2 Mapk1ip1-201ENSMUST00000075667 1502 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sh3rf2Q8BZT2 D2hgdh-201ENSMUST00000097633 3232 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sh3rf2Q8BZT2 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Sh3rf2Q8BZT2 Mamdc2-201ENSMUST00000036069 3338 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sh3rf2Q8BZT2 Morf4l2-213ENSMUST00000166478 1720 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
Sh3rf2Q8BZT2 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sh3rf2Q8BZT2 AC154314.2-201ENSMUST00000223677 3502 ntBASIC10.72□□□□□ -0.69
Sh3rf2Q8BZT2 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sh3rf2Q8BZT2 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Sh3rf2Q8BZT2 C130026L21Rik-204ENSMUST00000199587 1838 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Sh3rf2Q8BZT2 Bcl2l1-206ENSMUST00000140436 1865 ntTSL 2 BASIC10.72□□□□□ -0.69
Sh3rf2Q8BZT2 Micalcl-203ENSMUST00000106645 2309 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Sh3rf2Q8BZT2 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Sh3rf2Q8BZT2 Dip2c-202ENSMUST00000169960 4801 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Sh3rf2Q8BZT2 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sh3rf2Q8BZT2 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sh3rf2Q8BZT2 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC10.71□□□□□ -0.69
Sh3rf2Q8BZT2 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Sh3rf2Q8BZT2 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC10.71□□□□□ -0.69
Sh3rf2Q8BZT2 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sh3rf2Q8BZT2 Spaca9-201ENSMUST00000102877 671 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sh3rf2Q8BZT2 Hist1h4i-201ENSMUST00000102977 727 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Sh3rf2Q8BZT2 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Sh3rf2Q8BZT2 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sh3rf2Q8BZT2 Ankrd36-201ENSMUST00000109855 1363 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sh3rf2Q8BZT2 Chp1-202ENSMUST00000119172 3027 ntTSL 2 BASIC10.71□□□□□ -0.69
Sh3rf2Q8BZT2 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sh3rf2Q8BZT2 Ptpa-210ENSMUST00000136009 810 ntTSL 3 BASIC10.71□□□□□ -0.69
Sh3rf2Q8BZT2 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sh3rf2Q8BZT2 1700099I09Rik-201ENSMUST00000167834 769 ntTSL 2 BASIC10.71□□□□□ -0.69
Sh3rf2Q8BZT2 1700085C21Rik-201ENSMUST00000187123 1082 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Sh3rf2Q8BZT2 Gm6170-201ENSMUST00000187672 1388 ntBASIC10.71□□□□□ -0.69
Sh3rf2Q8BZT2 Cpsf4l-201ENSMUST00000018871 1235 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Sh3rf2Q8BZT2 Myc-208ENSMUST00000191178 1362 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Sh3rf2Q8BZT2 Gm37858-201ENSMUST00000192759 1231 ntBASIC10.71□□□□□ -0.69
Sh3rf2Q8BZT2 Gm38034-201ENSMUST00000193915 2069 ntBASIC10.71□□□□□ -0.69
Sh3rf2Q8BZT2 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC10.71□□□□□ -0.69
Sh3rf2Q8BZT2 Gm38321-201ENSMUST00000195053 235 ntBASIC10.71□□□□□ -0.69
Sh3rf2Q8BZT2 Ighv1-70-201ENSMUST00000196509 351 ntBASIC10.71□□□□□ -0.69
Sh3rf2Q8BZT2 Gm42780-201ENSMUST00000197083 734 ntBASIC10.71□□□□□ -0.69
Sh3rf2Q8BZT2 1700048F04Rik-201ENSMUST00000199057 1064 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Sh3rf2Q8BZT2 Gm43625-201ENSMUST00000199177 1539 ntBASIC10.71□□□□□ -0.69
Sh3rf2Q8BZT2 Gm43821-201ENSMUST00000199198 729 ntTSL 3 BASIC10.71□□□□□ -0.69
Sh3rf2Q8BZT2 Gm43811-201ENSMUST00000202862 695 ntBASIC10.71□□□□□ -0.69
Sh3rf2Q8BZT2 Gm45170-201ENSMUST00000206746 1671 ntBASIC10.71□□□□□ -0.69
Sh3rf2Q8BZT2 Gm7319-201ENSMUST00000210047 778 ntBASIC10.71□□□□□ -0.69
Sh3rf2Q8BZT2 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sh3rf2Q8BZT2 Angel1-201ENSMUST00000021682 3850 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sh3rf2Q8BZT2 AC140314.1-201ENSMUST00000219549 554 ntBASIC10.71□□□□□ -0.69
Sh3rf2Q8BZT2 Klf10-203ENSMUST00000227920 2144 ntBASIC10.71□□□□□ -0.69
Sh3rf2Q8BZT2 AC107711.4-201ENSMUST00000228948 440 ntBASIC10.71□□□□□ -0.69
Sh3rf2Q8BZT2 Gm8615-201ENSMUST00000025307 771 ntBASIC10.71□□□□□ -0.69
Sh3rf2Q8BZT2 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sh3rf2Q8BZT2 Cyp7b1-201ENSMUST00000035625 2166 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sh3rf2Q8BZT2 Galm-201ENSMUST00000039205 2314 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sh3rf2Q8BZT2 Nrf1-201ENSMUST00000004761 1589 ntTSL 5 BASIC10.71□□□□□ -0.69
Sh3rf2Q8BZT2 Olfr1394-201ENSMUST00000052668 939 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Sh3rf2Q8BZT2 Ensa-202ENSMUST00000058230 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sh3rf2Q8BZT2 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sh3rf2Q8BZT2 Rps3a3-201ENSMUST00000074680 795 ntBASIC10.71□□□□□ -0.69
Sh3rf2Q8BZT2 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.7
Sh3rf2Q8BZT2 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Sh3rf2Q8BZT2 AC125409.1-201ENSMUST00000223213 3370 ntBASIC10.71□□□□□ -0.7
Sh3rf2Q8BZT2 Slc23a2-201ENSMUST00000028815 6364 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Sh3rf2Q8BZT2 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.7
Sh3rf2Q8BZT2 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC10.71□□□□□ -0.7
Sh3rf2Q8BZT2 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Sh3rf2Q8BZT2 Clip1-204ENSMUST00000111564 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Sh3rf2Q8BZT2 Gm44415-201ENSMUST00000204151 2112 ntBASIC10.7□□□□□ -0.7
Sh3rf2Q8BZT2 Anks1b-233ENSMUST00000183156 4248 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Sh3rf2Q8BZT2 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC10.7□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms