Protein–RNA interactions for Protein: Q8BFW4

Trim65, Tripartite motif-containing protein 65, mousemouse

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim65Q8BFW4 n-R5s136-201ENSMUST00000179080 119 ntBASIC11.29□□□□□ -0.6
Trim65Q8BFW4 Gm25018-201ENSMUST00000179081 119 ntBASIC11.29□□□□□ -0.6
Trim65Q8BFW4 n-R5s104-201ENSMUST00000179107 119 ntBASIC11.29□□□□□ -0.6
Trim65Q8BFW4 n-R5s113-201ENSMUST00000179143 119 ntBASIC11.29□□□□□ -0.6
Trim65Q8BFW4 Gm3415-202ENSMUST00000179214 1154 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
Trim65Q8BFW4 n-R5s133-201ENSMUST00000179275 119 ntBASIC11.29□□□□□ -0.6
Trim65Q8BFW4 n-R5s117-201ENSMUST00000179431 119 ntBASIC11.29□□□□□ -0.6
Trim65Q8BFW4 Gm25212-201ENSMUST00000179432 119 ntBASIC11.29□□□□□ -0.6
Trim65Q8BFW4 n-R5s138-201ENSMUST00000179476 119 ntBASIC11.29□□□□□ -0.6
Trim65Q8BFW4 n-R5s122-201ENSMUST00000179500 119 ntBASIC11.29□□□□□ -0.6
Trim65Q8BFW4 n-R5s143-201ENSMUST00000179542 119 ntBASIC11.29□□□□□ -0.6
Trim65Q8BFW4 n-R5s107-201ENSMUST00000179704 119 ntBASIC11.29□□□□□ -0.6
Trim65Q8BFW4 Gm26391-201ENSMUST00000179843 119 ntBASIC11.29□□□□□ -0.6
Trim65Q8BFW4 n-R5s110-201ENSMUST00000179995 119 ntBASIC11.29□□□□□ -0.6
Trim65Q8BFW4 n-R5s128-201ENSMUST00000180096 119 ntBASIC11.29□□□□□ -0.6
Trim65Q8BFW4 n-R5s124-201ENSMUST00000180334 119 ntBASIC11.29□□□□□ -0.6
Trim65Q8BFW4 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trim65Q8BFW4 Plac9a-203ENSMUST00000183725 439 ntTSL 3 BASIC11.29□□□□□ -0.6
Trim65Q8BFW4 Plac9b-202ENSMUST00000183811 396 ntTSL 3 BASIC11.29□□□□□ -0.6
Trim65Q8BFW4 1700084F23Rik-202ENSMUST00000188461 747 ntTSL 3 BASIC11.29□□□□□ -0.6
Trim65Q8BFW4 Gm29669-201ENSMUST00000188605 881 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trim65Q8BFW4 Gm3409-203ENSMUST00000199142 1167 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Trim65Q8BFW4 Gm3402-203ENSMUST00000200228 1154 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
Trim65Q8BFW4 Gm43460-201ENSMUST00000202491 1057 ntBASIC11.29□□□□□ -0.6
Trim65Q8BFW4 Gm43912-201ENSMUST00000204352 538 ntBASIC11.29□□□□□ -0.6
Trim65Q8BFW4 Gm18059-201ENSMUST00000208073 580 ntBASIC11.29□□□□□ -0.6
Trim65Q8BFW4 Tmem238l-203ENSMUST00000211300 930 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
Trim65Q8BFW4 Gstz1-203ENSMUST00000220574 971 ntTSL 2 BASIC11.29□□□□□ -0.6
Trim65Q8BFW4 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim65Q8BFW4 Olfr115-201ENSMUST00000076936 939 ntAPPRIS P2 BASIC11.29□□□□□ -0.6
Trim65Q8BFW4 Gm24089-201ENSMUST00000093696 109 ntBASIC11.29□□□□□ -0.6
Trim65Q8BFW4 A1bg-201ENSMUST00000096418 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim65Q8BFW4 Znrf1-202ENSMUST00000166859 3650 ntTSL 5 BASIC11.29□□□□□ -0.6
Trim65Q8BFW4 Gm13169-201ENSMUST00000122090 1459 ntBASIC11.29□□□□□ -0.6
Trim65Q8BFW4 Lrrc49-204ENSMUST00000114034 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim65Q8BFW4 Gm45170-201ENSMUST00000206746 1671 ntBASIC11.29□□□□□ -0.6
Trim65Q8BFW4 Ints3-201ENSMUST00000029542 4337 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim65Q8BFW4 Gm7052-201ENSMUST00000167568 1512 ntBASIC11.29□□□□□ -0.6
Trim65Q8BFW4 E130308A19Rik-202ENSMUST00000070150 10856 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim65Q8BFW4 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
Trim65Q8BFW4 Gm8016-201ENSMUST00000221830 1575 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trim65Q8BFW4 Tnfaip8-212ENSMUST00000179937 2385 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trim65Q8BFW4 Gm16702-201ENSMUST00000181180 2384 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trim65Q8BFW4 Nr2c1-201ENSMUST00000092213 2376 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Trim65Q8BFW4 Rasgrp4-212ENSMUST00000204194 2993 ntTSL 5 BASIC11.28□□□□□ -0.6
Trim65Q8BFW4 Ufsp2-201ENSMUST00000034051 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim65Q8BFW4 Ddx3x-201ENSMUST00000000804 4692 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim65Q8BFW4 Gmps-201ENSMUST00000029405 8105 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim65Q8BFW4 Zfp418-201ENSMUST00000051435 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim65Q8BFW4 Gm30074-201ENSMUST00000193192 2541 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trim65Q8BFW4 Rxfp2-201ENSMUST00000065745 2539 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim65Q8BFW4 Klrc2-202ENSMUST00000112057 1149 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim65Q8BFW4 Mkrn2os-202ENSMUST00000112957 964 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Trim65Q8BFW4 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trim65Q8BFW4 Rpl17-ps1-201ENSMUST00000119156 552 ntBASIC11.28□□□□□ -0.6
Trim65Q8BFW4 Gm15285-201ENSMUST00000119271 473 ntBASIC11.28□□□□□ -0.6
Trim65Q8BFW4 Fthl17-ps2-201ENSMUST00000122268 528 ntBASIC11.28□□□□□ -0.6
Trim65Q8BFW4 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC11.28□□□□□ -0.6
Trim65Q8BFW4 Ptpa-210ENSMUST00000136009 810 ntTSL 3 BASIC11.28□□□□□ -0.6
Trim65Q8BFW4 Aamdc-206ENSMUST00000136757 789 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Trim65Q8BFW4 Adora3-202ENSMUST00000164730 1219 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trim65Q8BFW4 Tmem229b-ps-201ENSMUST00000168554 506 ntBASIC11.28□□□□□ -0.6
Trim65Q8BFW4 n-R5s130-201ENSMUST00000178128 119 ntBASIC11.28□□□□□ -0.6
Trim65Q8BFW4 Gm24312-201ENSMUST00000178677 119 ntBASIC11.28□□□□□ -0.6
Trim65Q8BFW4 n-R5s106-201ENSMUST00000179060 119 ntBASIC11.28□□□□□ -0.6
Trim65Q8BFW4 n-R5s118-201ENSMUST00000179887 119 ntBASIC11.28□□□□□ -0.6
Trim65Q8BFW4 Nmbr-206ENSMUST00000190114 662 ntTSL 3 BASIC11.28□□□□□ -0.6
Trim65Q8BFW4 Gm37020-201ENSMUST00000195303 992 ntBASIC11.28□□□□□ -0.6
Trim65Q8BFW4 AC126459.1-201ENSMUST00000214791 2123 ntBASIC11.28□□□□□ -0.6
Trim65Q8BFW4 AC154806.7-201ENSMUST00000227998 202 ntBASIC11.28□□□□□ -0.6
Trim65Q8BFW4 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Trim65Q8BFW4 Gm25514-201ENSMUST00000083860 135 ntBASIC11.28□□□□□ -0.6
Trim65Q8BFW4 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim65Q8BFW4 Aven-202ENSMUST00000099588 791 ntAPPRIS ALT2 TSL 3 BASIC11.28□□□□□ -0.6
Trim65Q8BFW4 Ptprg-201ENSMUST00000022264 9213 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim65Q8BFW4 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC11.28□□□□□ -0.6
Trim65Q8BFW4 Rasgrp4-211ENSMUST00000203380 3077 ntTSL 5 BASIC11.28□□□□□ -0.6
Trim65Q8BFW4 Stard4-201ENSMUST00000025236 5097 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim65Q8BFW4 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Trim65Q8BFW4 Vil1-201ENSMUST00000027366 3124 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim65Q8BFW4 Zeb1-201ENSMUST00000025081 5805 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim65Q8BFW4 Nup50-201ENSMUST00000165443 4741 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim65Q8BFW4 Camk2g-202ENSMUST00000080440 3604 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim65Q8BFW4 Rpap2-201ENSMUST00000065422 2268 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim65Q8BFW4 C230021G24Rik-201ENSMUST00000181196 3679 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trim65Q8BFW4 Col6a6-203ENSMUST00000166431 7098 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
Trim65Q8BFW4 Hdac9-206ENSMUST00000209990 3072 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
Trim65Q8BFW4 Ttc1-201ENSMUST00000048578 1438 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trim65Q8BFW4 Ctnnd1-204ENSMUST00000099941 5783 ntTSL 5 BASIC11.27□□□□□ -0.6
Trim65Q8BFW4 C1rb-201ENSMUST00000184647 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trim65Q8BFW4 Prkx-201ENSMUST00000036333 4146 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trim65Q8BFW4 4932438H23Rik-201ENSMUST00000035689 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trim65Q8BFW4 Usp47-206ENSMUST00000215510 4697 ntTSL 5 BASIC11.27□□□□□ -0.61
Trim65Q8BFW4 Gm32914-201ENSMUST00000203815 2228 ntBASIC11.27□□□□□ -0.61
Trim65Q8BFW4 Gm37567-201ENSMUST00000193241 2279 ntBASIC11.27□□□□□ -0.61
Trim65Q8BFW4 Camk2a-204ENSMUST00000115295 979 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trim65Q8BFW4 Gm12397-201ENSMUST00000117674 615 ntBASIC11.27□□□□□ -0.61
Trim65Q8BFW4 Gm16397-201ENSMUST00000122201 494 ntBASIC11.27□□□□□ -0.61
Trim65Q8BFW4 Gm12426-201ENSMUST00000153083 371 ntTSL 5 BASIC11.27□□□□□ -0.61
Trim65Q8BFW4 Gm8022-201ENSMUST00000191763 904 ntBASIC11.27□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 117.3 ms