Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Xlr4c-201ENSMUST00000068551 1500 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Rc3h1Q4VGL6 Gm32914-201ENSMUST00000203815 2228 ntBASIC12.33□□□□□ -0.44
Rc3h1Q4VGL6 Gm11571-201ENSMUST00000136820 2396 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rc3h1Q4VGL6 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rc3h1Q4VGL6 Trav11-201ENSMUST00000103585 343 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Rc3h1Q4VGL6 Trav11d-201ENSMUST00000103648 342 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Rc3h1Q4VGL6 Ptgds-203ENSMUST00000114259 775 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Rc3h1Q4VGL6 Gm12028-201ENSMUST00000118065 436 ntBASIC12.33□□□□□ -0.44
Rc3h1Q4VGL6 Gm11573-201ENSMUST00000119956 394 ntBASIC12.33□□□□□ -0.44
Rc3h1Q4VGL6 Ywhaq-ps3-201ENSMUST00000120944 738 ntBASIC12.33□□□□□ -0.44
Rc3h1Q4VGL6 Apobr-203ENSMUST00000137646 457 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
Rc3h1Q4VGL6 2210408F21Rik-209ENSMUST00000146778 579 ntTSL 5 BASIC12.33□□□□□ -0.44
Rc3h1Q4VGL6 Fxyd5-203ENSMUST00000159924 805 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.44
Rc3h1Q4VGL6 Fxyd5-210ENSMUST00000162116 817 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.44
Rc3h1Q4VGL6 Gm17190-202ENSMUST00000185178 1074 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Rc3h1Q4VGL6 Gm8384-201ENSMUST00000190905 704 ntBASIC12.33□□□□□ -0.44
Rc3h1Q4VGL6 Gm4430-202ENSMUST00000193902 1041 ntBASIC12.33□□□□□ -0.44
Rc3h1Q4VGL6 Gm38349-201ENSMUST00000195732 462 ntBASIC12.33□□□□□ -0.44
Rc3h1Q4VGL6 Trav11n-201ENSMUST00000200113 343 ntBASIC12.33□□□□□ -0.44
Rc3h1Q4VGL6 Gm7319-201ENSMUST00000210047 778 ntBASIC12.33□□□□□ -0.44
Rc3h1Q4VGL6 Ccdc114-205ENSMUST00000211367 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rc3h1Q4VGL6 CT572999.1-201ENSMUST00000220315 1260 ntBASIC12.33□□□□□ -0.44
Rc3h1Q4VGL6 AC141884.2-201ENSMUST00000228811 775 ntBASIC12.33□□□□□ -0.44
Rc3h1Q4VGL6 Il6-201ENSMUST00000026845 1141 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rc3h1Q4VGL6 Mptx1-201ENSMUST00000027816 799 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rc3h1Q4VGL6 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rc3h1Q4VGL6 Olfr63-201ENSMUST00000067840 955 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Rc3h1Q4VGL6 Olfr1233-201ENSMUST00000099784 1042 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Rc3h1Q4VGL6 Mei4-203ENSMUST00000189832 2578 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rc3h1Q4VGL6 Bcl2l1-206ENSMUST00000140436 1865 ntTSL 2 BASIC12.33□□□□□ -0.44
Rc3h1Q4VGL6 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Rc3h1Q4VGL6 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rc3h1Q4VGL6 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Rc3h1Q4VGL6 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rc3h1Q4VGL6 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rc3h1Q4VGL6 Gm11470-201ENSMUST00000118868 1475 ntBASIC12.33□□□□□ -0.44
Rc3h1Q4VGL6 Gm29101-201ENSMUST00000188329 1471 ntBASIC12.33□□□□□ -0.44
Rc3h1Q4VGL6 3000002C10Rik-201ENSMUST00000125451 1614 ntTSL 2 BASIC12.33□□□□□ -0.44
Rc3h1Q4VGL6 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rc3h1Q4VGL6 Uspl1-202ENSMUST00000100410 3148 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rc3h1Q4VGL6 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rc3h1Q4VGL6 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rc3h1Q4VGL6 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rc3h1Q4VGL6 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rc3h1Q4VGL6 Armcx3-203ENSMUST00000086884 3488 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Rc3h1Q4VGL6 Tctn3-201ENSMUST00000025981 2743 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rc3h1Q4VGL6 D630029K05Rik-201ENSMUST00000033651 2133 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rc3h1Q4VGL6 Gm13571-201ENSMUST00000124654 1381 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rc3h1Q4VGL6 Ccnt2-201ENSMUST00000027587 6738 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rc3h1Q4VGL6 Gm37368-201ENSMUST00000193173 3212 ntBASIC12.32□□□□□ -0.44
Rc3h1Q4VGL6 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rc3h1Q4VGL6 Tldc1-201ENSMUST00000049156 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rc3h1Q4VGL6 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rc3h1Q4VGL6 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rc3h1Q4VGL6 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rc3h1Q4VGL6 Scnn1g-201ENSMUST00000000221 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rc3h1Q4VGL6 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rc3h1Q4VGL6 Gsdma3-202ENSMUST00000107508 1587 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Rc3h1Q4VGL6 Lgals9-203ENSMUST00000108269 1586 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rc3h1Q4VGL6 Cryz-201ENSMUST00000029850 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rc3h1Q4VGL6 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rc3h1Q4VGL6 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rc3h1Q4VGL6 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rc3h1Q4VGL6 Gm12097-201ENSMUST00000121523 1414 ntBASIC12.32□□□□□ -0.44
Rc3h1Q4VGL6 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rc3h1Q4VGL6 AC136019.1-201ENSMUST00000226503 1412 ntBASIC12.32□□□□□ -0.44
Rc3h1Q4VGL6 Dnajc14-202ENSMUST00000217745 4133 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rc3h1Q4VGL6 Ighv1-50-201ENSMUST00000103521 390 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Rc3h1Q4VGL6 Krt40-202ENSMUST00000107443 1080 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rc3h1Q4VGL6 Gm11411-201ENSMUST00000117951 719 ntBASIC12.32□□□□□ -0.44
Rc3h1Q4VGL6 Gm12418-201ENSMUST00000118116 942 ntBASIC12.32□□□□□ -0.44
Rc3h1Q4VGL6 Gm12606-202ENSMUST00000129527 1184 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rc3h1Q4VGL6 3010001F23Rik-201ENSMUST00000130625 876 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rc3h1Q4VGL6 Gm5860-201ENSMUST00000137810 1028 ntTSL 2 BASIC12.32□□□□□ -0.44
Rc3h1Q4VGL6 Gm17226-201ENSMUST00000166637 780 ntTSL 3 BASIC12.32□□□□□ -0.44
Rc3h1Q4VGL6 Nrxn1-214ENSMUST00000173222 859 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rc3h1Q4VGL6 Gm29200-201ENSMUST00000188118 1085 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rc3h1Q4VGL6 Gm19566-201ENSMUST00000199576 610 ntBASIC12.32□□□□□ -0.44
Rc3h1Q4VGL6 Gm42689-201ENSMUST00000202403 404 ntBASIC12.32□□□□□ -0.44
Rc3h1Q4VGL6 Gm5881-201ENSMUST00000204737 367 ntBASIC12.32□□□□□ -0.44
Rc3h1Q4VGL6 Gm5907-202ENSMUST00000210969 661 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rc3h1Q4VGL6 Btg4-203ENSMUST00000213680 1282 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rc3h1Q4VGL6 AC164883.7-201ENSMUST00000228534 851 ntBASIC12.32□□□□□ -0.44
Rc3h1Q4VGL6 Olfr669-201ENSMUST00000098164 954 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Rc3h1Q4VGL6 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
Rc3h1Q4VGL6 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rc3h1Q4VGL6 Rasgrp1-204ENSMUST00000173252 1750 ntTSL 5 BASIC12.32□□□□□ -0.44
Rc3h1Q4VGL6 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC12.32□□□□□ -0.44
Rc3h1Q4VGL6 Bsnd-201ENSMUST00000054472 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rc3h1Q4VGL6 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rc3h1Q4VGL6 Mkrn1-204ENSMUST00000114823 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rc3h1Q4VGL6 Bcl11a-203ENSMUST00000109516 2329 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rc3h1Q4VGL6 Smpd4-218ENSMUST00000170273 2166 ntTSL 5 BASIC12.32□□□□□ -0.44
Rc3h1Q4VGL6 Ralgps1-202ENSMUST00000091039 2738 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rc3h1Q4VGL6 Gm42479-201ENSMUST00000198654 1356 ntBASIC12.31□□□□□ -0.44
Rc3h1Q4VGL6 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Rc3h1Q4VGL6 Phf8-202ENSMUST00000046962 3105 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rc3h1Q4VGL6 Dyrk4-202ENSMUST00000078521 2252 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rc3h1Q4VGL6 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rc3h1Q4VGL6 Gm6783-201ENSMUST00000120916 1437 ntBASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms