Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Zbtb25-202ENSMUST00000176102 2707 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Syne3Q4FZC9 Scgb2b27-203ENSMUST00000185399 702 ntAPPRIS ALT2 TSL 2 BASIC11.22□□□□□ -0.61
Syne3Q4FZC9 Mdm4-206ENSMUST00000186617 4694 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Syne3Q4FZC9 1700084F23Rik-202ENSMUST00000188461 747 ntTSL 3 BASIC11.22□□□□□ -0.61
Syne3Q4FZC9 Gm7047-201ENSMUST00000196224 1063 ntBASIC11.22□□□□□ -0.61
Syne3Q4FZC9 Gm43375-201ENSMUST00000196705 2480 ntBASIC11.22□□□□□ -0.61
Syne3Q4FZC9 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Syne3Q4FZC9 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC11.22□□□□□ -0.61
Syne3Q4FZC9 9530026P05Rik-204ENSMUST00000204449 1740 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Syne3Q4FZC9 Rpl15-ps5-201ENSMUST00000205636 605 ntBASIC11.22□□□□□ -0.61
Syne3Q4FZC9 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC11.22□□□□□ -0.61
Syne3Q4FZC9 Gm18035-201ENSMUST00000211962 589 ntBASIC11.22□□□□□ -0.61
Syne3Q4FZC9 AC113282.5-201ENSMUST00000224330 1679 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Syne3Q4FZC9 Ptcd1-201ENSMUST00000031628 3087 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Syne3Q4FZC9 Abcf3-201ENSMUST00000003319 3090 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Syne3Q4FZC9 Rbm3-201ENSMUST00000040010 2792 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Syne3Q4FZC9 Kirrel3-201ENSMUST00000045091 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Syne3Q4FZC9 March10-201ENSMUST00000049995 3074 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Syne3Q4FZC9 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Syne3Q4FZC9 Lrrc4-201ENSMUST00000062304 3615 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Syne3Q4FZC9 Rnf181-202ENSMUST00000069595 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Syne3Q4FZC9 Olfr963-201ENSMUST00000073433 936 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Syne3Q4FZC9 Olfr525-201ENSMUST00000078103 1050 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Syne3Q4FZC9 Cdkal1-202ENSMUST00000091674 2427 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Syne3Q4FZC9 4932431P20Rik-201ENSMUST00000098602 1340 ntBASIC11.22□□□□□ -0.61
Syne3Q4FZC9 Map2-206ENSMUST00000114017 4981 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Syne3Q4FZC9 Ints3-201ENSMUST00000029542 4337 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Syne3Q4FZC9 Zdbf2-201ENSMUST00000029025 12112 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Syne3Q4FZC9 Cdh1-203ENSMUST00000167688 3203 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Syne3Q4FZC9 Tro-201ENSMUST00000087253 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Syne3Q4FZC9 6430548M08Rik-203ENSMUST00000108950 3125 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Syne3Q4FZC9 Pou2f1-204ENSMUST00000111426 2671 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Syne3Q4FZC9 Gys1-206ENSMUST00000211150 2681 ntTSL 5 BASIC11.22□□□□□ -0.61
Syne3Q4FZC9 Pcdh15-233ENSMUST00000191709 5346 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Syne3Q4FZC9 Kit-201ENSMUST00000005815 5214 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Syne3Q4FZC9 C1rb-201ENSMUST00000184647 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Syne3Q4FZC9 Phf8-203ENSMUST00000112662 3732 ntAPPRIS P3 TSL 5 BASIC11.21□□□□□ -0.61
Syne3Q4FZC9 Mon2-201ENSMUST00000037557 5511 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Syne3Q4FZC9 Nemp2-201ENSMUST00000165859 3396 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Syne3Q4FZC9 Gosr2-201ENSMUST00000021329 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Syne3Q4FZC9 Sh3gl2-204ENSMUST00000107189 3231 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Syne3Q4FZC9 4933425M03Rik-201ENSMUST00000195991 1544 ntBASIC11.21□□□□□ -0.61
Syne3Q4FZC9 Gpat4-201ENSMUST00000167004 5518 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Syne3Q4FZC9 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC11.21□□□□□ -0.61
Syne3Q4FZC9 Gps2-202ENSMUST00000072581 1311 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Syne3Q4FZC9 Zfp940-202ENSMUST00000108223 2560 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Syne3Q4FZC9 Ank3-220ENSMUST00000182439 2586 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Syne3Q4FZC9 Srpk1-202ENSMUST00000114767 445 ntTSL 3 BASIC11.21□□□□□ -0.61
Syne3Q4FZC9 Apoc3-202ENSMUST00000118649 453 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
Syne3Q4FZC9 Gm14234-201ENSMUST00000119539 845 ntBASIC11.21□□□□□ -0.61
Syne3Q4FZC9 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC11.21□□□□□ -0.61
Syne3Q4FZC9 Gm13802-201ENSMUST00000150159 663 ntTSL 3 BASIC11.21□□□□□ -0.61
Syne3Q4FZC9 Gm9372-201ENSMUST00000168454 430 ntBASIC11.21□□□□□ -0.61
Syne3Q4FZC9 Gm16755-201ENSMUST00000180595 933 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Syne3Q4FZC9 Mir7035-201ENSMUST00000184713 82 ntBASIC11.21□□□□□ -0.61
Syne3Q4FZC9 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC11.21□□□□□ -0.61
Syne3Q4FZC9 Prss51-204ENSMUST00000224112 1042 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Syne3Q4FZC9 AC164429.1-201ENSMUST00000224210 518 ntBASIC11.21□□□□□ -0.61
Syne3Q4FZC9 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC11.21□□□□□ -0.61
Syne3Q4FZC9 Pvalb-201ENSMUST00000005860 977 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Syne3Q4FZC9 Dcpp2-201ENSMUST00000088598 611 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Syne3Q4FZC9 C2-206ENSMUST00000152417 2157 ntTSL 5 BASIC11.21□□□□□ -0.62
Syne3Q4FZC9 Skp2-201ENSMUST00000096482 3118 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Syne3Q4FZC9 Gm43274-201ENSMUST00000202545 5000 ntBASIC11.21□□□□□ -0.62
Syne3Q4FZC9 Gm42047-202ENSMUST00000212899 4988 ntTSL 2 BASIC11.21□□□□□ -0.62
Syne3Q4FZC9 Tcn2-205ENSMUST00000109991 1943 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Syne3Q4FZC9 Kcng4-201ENSMUST00000061828 3806 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Syne3Q4FZC9 Egfr-201ENSMUST00000020329 10208 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Syne3Q4FZC9 Pmp22-201ENSMUST00000018361 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Syne3Q4FZC9 Rbp1-201ENSMUST00000052068 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Syne3Q4FZC9 Arfgap3-201ENSMUST00000067215 2619 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Syne3Q4FZC9 Vmn1r38-201ENSMUST00000226457 3462 ntAPPRIS P1 BASIC11.21□□□□□ -0.62
Syne3Q4FZC9 Wdr46-ps-201ENSMUST00000200591 1712 ntBASIC11.21□□□□□ -0.62
Syne3Q4FZC9 Gm8684-201ENSMUST00000195078 1564 ntBASIC11.2□□□□□ -0.62
Syne3Q4FZC9 Gm7357-201ENSMUST00000195361 2991 ntBASIC11.2□□□□□ -0.62
Syne3Q4FZC9 Babam2-204ENSMUST00000114515 1497 ntTSL 5 BASIC11.2□□□□□ -0.62
Syne3Q4FZC9 Oscp1-203ENSMUST00000143712 1473 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Syne3Q4FZC9 Mterf3-201ENSMUST00000021991 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Syne3Q4FZC9 Cdh18-207ENSMUST00000226693 2165 ntBASIC11.2□□□□□ -0.62
Syne3Q4FZC9 Gm7278-201ENSMUST00000119836 1401 ntBASIC11.2□□□□□ -0.62
Syne3Q4FZC9 Gm14820-201ENSMUST00000126286 1449 ntTSL 3 BASIC11.2□□□□□ -0.62
Syne3Q4FZC9 Gm3139-202ENSMUST00000201138 1303 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Syne3Q4FZC9 Gm3183-203ENSMUST00000202911 1303 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Syne3Q4FZC9 Dgkh-201ENSMUST00000074729 3967 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Syne3Q4FZC9 Sfxn5-204ENSMUST00000113788 514 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Syne3Q4FZC9 4930589P08Rik-201ENSMUST00000129097 1084 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Syne3Q4FZC9 6820431F20Rik-201ENSMUST00000150051 936 ntBASIC11.2□□□□□ -0.62
Syne3Q4FZC9 Park2-203ENSMUST00000168593 735 ntTSL 5 BASIC11.2□□□□□ -0.62
Syne3Q4FZC9 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Syne3Q4FZC9 Gm26918-201ENSMUST00000182496 728 ntTSL 2 BASIC11.2□□□□□ -0.62
Syne3Q4FZC9 2410002F23Rik-220ENSMUST00000191537 872 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Syne3Q4FZC9 Klk1b15-ps-201ENSMUST00000206273 715 ntBASIC11.2□□□□□ -0.62
Syne3Q4FZC9 AC154572.1-201ENSMUST00000226098 1204 ntBASIC11.2□□□□□ -0.62
Syne3Q4FZC9 Gm26670-202ENSMUST00000226862 340 ntBASIC11.2□□□□□ -0.62
Syne3Q4FZC9 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Syne3Q4FZC9 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Syne3Q4FZC9 Rpl7-201ENSMUST00000058437 1163 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Syne3Q4FZC9 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Syne3Q4FZC9 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Syne3Q4FZC9 Vmn1r212-201ENSMUST00000095960 1164 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms