Protein–RNA interactions for Protein: Q3MI99

Ccbe1, Collagen and calcium-binding EGF domain-containing protein 1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccbe1Q3MI99 Scrn3-201ENSMUST00000090811 3309 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ccbe1Q3MI99 Gm38344-201ENSMUST00000195306 1353 ntBASIC9.58□□□□□ -0.88
Ccbe1Q3MI99 Tardbp-210ENSMUST00000172073 6513 ntTSL 5 BASIC9.58□□□□□ -0.88
Ccbe1Q3MI99 Yes1-202ENSMUST00000168707 2259 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ccbe1Q3MI99 Ccdc40-202ENSMUST00000053440 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ccbe1Q3MI99 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ccbe1Q3MI99 Baat-201ENSMUST00000043056 1941 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ccbe1Q3MI99 Rtl3-201ENSMUST00000062010 2948 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ccbe1Q3MI99 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ccbe1Q3MI99 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Ccbe1Q3MI99 Myo5a-206ENSMUST00000136731 6480 ntAPPRIS ALT1 TSL 5 BASIC9.58□□□□□ -0.88
Ccbe1Q3MI99 Gm12059-201ENSMUST00000128996 3105 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Ccbe1Q3MI99 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC9.58□□□□□ -0.88
Ccbe1Q3MI99 Ncaph2-203ENSMUST00000088717 3302 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Ccbe1Q3MI99 Gtpbp8-204ENSMUST00000162512 3415 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Ccbe1Q3MI99 Dcx-204ENSMUST00000112856 1333 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
Ccbe1Q3MI99 Erich3-202ENSMUST00000098496 8280 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
Ccbe1Q3MI99 Gm10538-201ENSMUST00000189499 1877 ntTSL 2 BASIC9.57□□□□□ -0.88
Ccbe1Q3MI99 Adcy7-202ENSMUST00000168545 5937 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Ccbe1Q3MI99 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Ccbe1Q3MI99 Loxl3-202ENSMUST00000101257 3252 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Ccbe1Q3MI99 Usp10-202ENSMUST00000108988 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Ccbe1Q3MI99 Ncapd3-202ENSMUST00000086198 4675 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Ccbe1Q3MI99 Nfam1-203ENSMUST00000109503 2834 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
Ccbe1Q3MI99 AC167669.2-201ENSMUST00000224417 1620 ntBASIC9.57□□□□□ -0.88
Ccbe1Q3MI99 Fam53b-202ENSMUST00000097998 4341 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Ccbe1Q3MI99 Rnf123-207ENSMUST00000160249 4426 ntAPPRIS P3 TSL 5 BASIC9.57□□□□□ -0.88
Ccbe1Q3MI99 Gm13128-201ENSMUST00000105751 1745 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Ccbe1Q3MI99 Hacl1-214ENSMUST00000167175 1739 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Ccbe1Q3MI99 Gm42868-201ENSMUST00000199168 2697 ntBASIC9.57□□□□□ -0.88
Ccbe1Q3MI99 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC9.57□□□□□ -0.88
Ccbe1Q3MI99 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Ccbe1Q3MI99 Gm12566-201ENSMUST00000121479 359 ntBASIC9.57□□□□□ -0.88
Ccbe1Q3MI99 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Ccbe1Q3MI99 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Ccbe1Q3MI99 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC9.57□□□□□ -0.88
Ccbe1Q3MI99 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC9.57□□□□□ -0.88
Ccbe1Q3MI99 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Ccbe1Q3MI99 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC9.57□□□□□ -0.88
Ccbe1Q3MI99 Tnxa-201ENSMUST00000173277 2975 ntBASIC9.57□□□□□ -0.88
Ccbe1Q3MI99 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Ccbe1Q3MI99 Omt2b-203ENSMUST00000187667 727 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Ccbe1Q3MI99 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Ccbe1Q3MI99 Gm5865-201ENSMUST00000198713 637 ntBASIC9.57□□□□□ -0.88
Ccbe1Q3MI99 Gm43916-201ENSMUST00000205062 967 ntBASIC9.57□□□□□ -0.88
Ccbe1Q3MI99 Gm18212-201ENSMUST00000211678 889 ntBASIC9.57□□□□□ -0.88
Ccbe1Q3MI99 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC9.57□□□□□ -0.88
Ccbe1Q3MI99 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Ccbe1Q3MI99 Olfr173-201ENSMUST00000049940 1164 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
Ccbe1Q3MI99 Vps8-205ENSMUST00000118138 3060 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Ccbe1Q3MI99 Osmr-204ENSMUST00000176826 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Ccbe1Q3MI99 Mymk-201ENSMUST00000009358 1382 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Ccbe1Q3MI99 Scnn1a-203ENSMUST00000176110 3494 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
Ccbe1Q3MI99 Gm30074-201ENSMUST00000193192 2541 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Ccbe1Q3MI99 AC159886.2-201ENSMUST00000214737 2740 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Ccbe1Q3MI99 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Ccbe1Q3MI99 Gm12381-201ENSMUST00000126314 2186 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Ccbe1Q3MI99 Ephb4-205ENSMUST00000166239 3741 ntAPPRIS P3 TSL 5 BASIC9.57□□□□□ -0.88
Ccbe1Q3MI99 Gm43795-201ENSMUST00000202051 2366 ntBASIC9.57□□□□□ -0.88
Ccbe1Q3MI99 Ddhd2-201ENSMUST00000033975 4245 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Ccbe1Q3MI99 4932702P03Rik-202ENSMUST00000151220 2792 ntTSL 2 BASIC9.57□□□□□ -0.88
Ccbe1Q3MI99 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC9.56□□□□□ -0.88
Ccbe1Q3MI99 Pkd2l2-202ENSMUST00000166156 2132 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Ccbe1Q3MI99 Gm42692-201ENSMUST00000199482 2833 ntBASIC9.56□□□□□ -0.88
Ccbe1Q3MI99 4930570G19Rik-201ENSMUST00000139363 3112 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Ccbe1Q3MI99 Kif28-201ENSMUST00000131716 3526 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
Ccbe1Q3MI99 Gm16486-201ENSMUST00000212436 4584 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Ccbe1Q3MI99 Lhx6-204ENSMUST00000112966 3188 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Ccbe1Q3MI99 Gm12498-201ENSMUST00000138374 2458 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Ccbe1Q3MI99 Gramd1b-214ENSMUST00000216821 7445 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
Ccbe1Q3MI99 Gm4451-201ENSMUST00000186000 1891 ntBASIC9.56□□□□□ -0.88
Ccbe1Q3MI99 Gm6580-201ENSMUST00000117504 1357 ntBASIC9.56□□□□□ -0.88
Ccbe1Q3MI99 Sfxn5-204ENSMUST00000113788 514 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Ccbe1Q3MI99 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC9.56□□□□□ -0.88
Ccbe1Q3MI99 Gm4909-201ENSMUST00000118749 794 ntBASIC9.56□□□□□ -0.88
Ccbe1Q3MI99 Gm12337-201ENSMUST00000119634 400 ntBASIC9.56□□□□□ -0.88
Ccbe1Q3MI99 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Ccbe1Q3MI99 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC9.56□□□□□ -0.88
Ccbe1Q3MI99 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Ccbe1Q3MI99 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Ccbe1Q3MI99 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC9.56□□□□□ -0.88
Ccbe1Q3MI99 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Ccbe1Q3MI99 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Ccbe1Q3MI99 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Ccbe1Q3MI99 Gm38317-201ENSMUST00000195564 343 ntBASIC9.56□□□□□ -0.88
Ccbe1Q3MI99 4930478P22Rik-202ENSMUST00000201921 723 ntTSL 3 BASIC9.56□□□□□ -0.88
Ccbe1Q3MI99 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC9.56□□□□□ -0.88
Ccbe1Q3MI99 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Ccbe1Q3MI99 AC166344.1-202ENSMUST00000224139 234 ntBASIC9.56□□□□□ -0.88
Ccbe1Q3MI99 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Ccbe1Q3MI99 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Ccbe1Q3MI99 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Ccbe1Q3MI99 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC9.56□□□□□ -0.88
Ccbe1Q3MI99 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Ccbe1Q3MI99 Tbx22-202ENSMUST00000118986 3035 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
Ccbe1Q3MI99 Scml4-202ENSMUST00000105494 4166 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Ccbe1Q3MI99 Thg1l-202ENSMUST00000109254 2202 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Ccbe1Q3MI99 E2f7-204ENSMUST00000173471 3567 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Ccbe1Q3MI99 Olfr517-202ENSMUST00000216500 2139 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Ccbe1Q3MI99 Serpina3f-203ENSMUST00000167049 2042 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms