Protein–RNA interactions for Protein: P02830

Hoxa7, Homeobox protein Hox-A7, mousemouse

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa7P02830 n-R5s110-201ENSMUST00000179995 119 ntBASIC12.74□□□□□ -0.37
Hoxa7P02830 n-R5s128-201ENSMUST00000180096 119 ntBASIC12.74□□□□□ -0.37
Hoxa7P02830 n-R5s124-201ENSMUST00000180334 119 ntBASIC12.74□□□□□ -0.37
Hoxa7P02830 Trav18-202ENSMUST00000186573 325 ntAPPRIS ALT2 BASIC12.74□□□□□ -0.37
Hoxa7P02830 Mir124-2hg-203ENSMUST00000186923 673 ntTSL 3 BASIC12.74□□□□□ -0.37
Hoxa7P02830 Gm28096-201ENSMUST00000191391 824 ntTSL 5 BASIC12.74□□□□□ -0.37
Hoxa7P02830 Madcam1-202ENSMUST00000217748 944 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxa7P02830 AC157650.1-201ENSMUST00000224582 610 ntBASIC12.74□□□□□ -0.37
Hoxa7P02830 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxa7P02830 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Hoxa7P02830 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Hoxa7P02830 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxa7P02830 Crip1-201ENSMUST00000006523 445 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxa7P02830 Gm24089-201ENSMUST00000093696 109 ntBASIC12.74□□□□□ -0.37
Hoxa7P02830 Zfp280b-201ENSMUST00000061617 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxa7P02830 Pask-201ENSMUST00000027493 5779 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxa7P02830 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxa7P02830 Tyro3-202ENSMUST00000110783 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxa7P02830 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxa7P02830 Ik-201ENSMUST00000007042 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxa7P02830 Dnmbp-206ENSMUST00000212592 3901 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxa7P02830 Uimc1-204ENSMUST00000127195 2936 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Hoxa7P02830 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxa7P02830 Samsn1-201ENSMUST00000114239 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxa7P02830 Mical3-217ENSMUST00000207889 9204 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Hoxa7P02830 Gm42450-201ENSMUST00000199286 2644 ntTSL 5 BASIC12.74□□□□□ -0.37
Hoxa7P02830 Trim34a-201ENSMUST00000060315 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxa7P02830 Gm28268-201ENSMUST00000188966 2528 ntTSL 5 BASIC12.73□□□□□ -0.37
Hoxa7P02830 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxa7P02830 Nrap-202ENSMUST00000073536 5501 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxa7P02830 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxa7P02830 March10-204ENSMUST00000138977 2979 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Hoxa7P02830 Gas7-202ENSMUST00000108680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxa7P02830 Anxa7-201ENSMUST00000065504 2851 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxa7P02830 Theg-201ENSMUST00000020566 1444 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxa7P02830 Gm14005-210ENSMUST00000225087 1413 ntBASIC12.73□□□□□ -0.37
Hoxa7P02830 Xrcc6-201ENSMUST00000069530 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxa7P02830 Rnf20-201ENSMUST00000029989 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxa7P02830 Gm44445-201ENSMUST00000204075 2683 ntBASIC12.73□□□□□ -0.37
Hoxa7P02830 Kcne4-201ENSMUST00000057262 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxa7P02830 Tsc22d4-202ENSMUST00000100539 3983 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxa7P02830 Gm44933-201ENSMUST00000208637 1987 ntTSL 5 BASIC12.73□□□□□ -0.37
Hoxa7P02830 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxa7P02830 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxa7P02830 Gm5148-203ENSMUST00000108105 1282 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxa7P02830 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Hoxa7P02830 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxa7P02830 Gm14320-201ENSMUST00000137275 1023 ntTSL 3 BASIC12.73□□□□□ -0.37
Hoxa7P02830 Gm13857-201ENSMUST00000139645 173 ntBASIC12.73□□□□□ -0.37
Hoxa7P02830 Eef1d-217ENSMUST00000151066 704 ntTSL 5 BASIC12.73□□□□□ -0.37
Hoxa7P02830 Gm16581-201ENSMUST00000160730 991 ntBASIC12.73□□□□□ -0.37
Hoxa7P02830 Gm42751-201ENSMUST00000198065 559 ntBASIC12.73□□□□□ -0.37
Hoxa7P02830 Gm5311-201ENSMUST00000203518 709 ntBASIC12.73□□□□□ -0.37
Hoxa7P02830 Gm43912-201ENSMUST00000204352 538 ntBASIC12.73□□□□□ -0.37
Hoxa7P02830 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC12.73□□□□□ -0.37
Hoxa7P02830 Gm18499-201ENSMUST00000220808 1021 ntBASIC12.73□□□□□ -0.37
Hoxa7P02830 Aven-202ENSMUST00000099588 791 ntAPPRIS ALT2 TSL 3 BASIC12.73□□□□□ -0.37
Hoxa7P02830 Elf5-206ENSMUST00000164172 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxa7P02830 Gm26658-201ENSMUST00000181067 2500 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxa7P02830 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxa7P02830 Ttll13-201ENSMUST00000058266 3010 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Hoxa7P02830 Rpgrip1-202ENSMUST00000111603 5380 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxa7P02830 Phf20-ps-201ENSMUST00000185066 2886 ntBASIC12.73□□□□□ -0.37
Hoxa7P02830 Eng-205ENSMUST00000167841 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxa7P02830 Atxn1-203ENSMUST00000180110 3901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxa7P02830 Atxn2l-206ENSMUST00000206577 3894 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Hoxa7P02830 Cntrl-201ENSMUST00000028235 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxa7P02830 Setmar-201ENSMUST00000049246 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxa7P02830 Mkx-201ENSMUST00000079788 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxa7P02830 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxa7P02830 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Hoxa7P02830 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Hoxa7P02830 Gm30074-201ENSMUST00000193192 2541 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxa7P02830 Uhrf1-202ENSMUST00000113035 3402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxa7P02830 Gpsm1-201ENSMUST00000066889 3432 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxa7P02830 AC124577.2-201ENSMUST00000217413 2420 ntBASIC12.72□□□□□ -0.37
Hoxa7P02830 Plscr2-205ENSMUST00000180154 1900 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxa7P02830 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxa7P02830 Gcc1-201ENSMUST00000064377 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxa7P02830 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxa7P02830 Chml-204ENSMUST00000211207 1866 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Hoxa7P02830 Mfsd11-201ENSMUST00000021173 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxa7P02830 Plekhb2-201ENSMUST00000027297 3279 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxa7P02830 Pklr-201ENSMUST00000047111 2787 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxa7P02830 Srd5a3-203ENSMUST00000113507 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxa7P02830 Ctss-201ENSMUST00000015667 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxa7P02830 Slc13a5-206ENSMUST00000208912 1751 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Hoxa7P02830 Clip1-204ENSMUST00000111564 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxa7P02830 AC131081.1-201ENSMUST00000219535 1736 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxa7P02830 Nphs1-203ENSMUST00000126297 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxa7P02830 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxa7P02830 Spaca9-201ENSMUST00000102877 671 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxa7P02830 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC12.72□□□□□ -0.37
Hoxa7P02830 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxa7P02830 Paip2-202ENSMUST00000115734 815 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Hoxa7P02830 Gm11919-201ENSMUST00000117609 721 ntBASIC12.72□□□□□ -0.37
Hoxa7P02830 Gm5555-201ENSMUST00000120352 1111 ntBASIC12.72□□□□□ -0.37
Hoxa7P02830 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxa7P02830 H2al1e-201ENSMUST00000178979 494 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Hoxa7P02830 Gm26978-201ENSMUST00000182843 304 ntTSL 3 BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms