Protein–RNA interactions for Protein: O54890

Itgb3, Integrin beta-3, mousemouse

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itgb3O54890 Gm37242-201ENSMUST00000191873 2085 ntBASIC11.21□□□□□ -0.61
Itgb3O54890 5730403I07Rik-201ENSMUST00000183878 2033 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Itgb3O54890 AC166359.1-201ENSMUST00000220243 1871 ntBASIC11.21□□□□□ -0.61
Itgb3O54890 Serpina3g-201ENSMUST00000043315 1803 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Itgb3O54890 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
Itgb3O54890 Atp6v0a4-202ENSMUST00000114908 3307 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Itgb3O54890 Psmc1-201ENSMUST00000021595 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Itgb3O54890 Nos1ap-203ENSMUST00000160466 1533 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Itgb3O54890 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Itgb3O54890 Als2cr12-206ENSMUST00000191565 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Itgb3O54890 Gm6783-201ENSMUST00000120916 1437 ntBASIC11.21□□□□□ -0.61
Itgb3O54890 Myc-208ENSMUST00000191178 1362 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Itgb3O54890 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Itgb3O54890 Gm12943-201ENSMUST00000119616 210 ntBASIC11.21□□□□□ -0.61
Itgb3O54890 Prelid3b-203ENSMUST00000120822 622 ntTSL 3 BASIC11.21□□□□□ -0.61
Itgb3O54890 Gm12606-202ENSMUST00000129527 1184 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Itgb3O54890 Ptpa-210ENSMUST00000136009 810 ntTSL 3 BASIC11.21□□□□□ -0.61
Itgb3O54890 Gm5860-201ENSMUST00000137810 1028 ntTSL 2 BASIC11.21□□□□□ -0.61
Itgb3O54890 Gm13827-201ENSMUST00000148801 372 ntBASIC11.21□□□□□ -0.61
Itgb3O54890 Krtcap2-204ENSMUST00000168900 582 ntTSL 3 BASIC11.21□□□□□ -0.61
Itgb3O54890 Gm6291-201ENSMUST00000179994 309 ntBASIC11.21□□□□□ -0.61
Itgb3O54890 Trav18-202ENSMUST00000186573 325 ntAPPRIS ALT2 BASIC11.21□□□□□ -0.61
Itgb3O54890 Gm37597-201ENSMUST00000191853 382 ntBASIC11.21□□□□□ -0.61
Itgb3O54890 Gm8625-201ENSMUST00000194185 1077 ntBASIC11.21□□□□□ -0.61
Itgb3O54890 Nme6-214ENSMUST00000200468 865 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
Itgb3O54890 Gm45094-201ENSMUST00000207013 617 ntBASIC11.21□□□□□ -0.61
Itgb3O54890 AC126799.1-201ENSMUST00000221976 246 ntBASIC11.21□□□□□ -0.61
Itgb3O54890 Gm3926-201ENSMUST00000223378 1123 ntBASIC11.21□□□□□ -0.61
Itgb3O54890 Cypt12-201ENSMUST00000029080 550 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Itgb3O54890 Lsm3-201ENSMUST00000040607 743 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Itgb3O54890 Ptma-201ENSMUST00000045897 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Itgb3O54890 Dmtf1-201ENSMUST00000071921 3806 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Itgb3O54890 Gm10238-201ENSMUST00000089689 408 ntBASIC11.21□□□□□ -0.61
Itgb3O54890 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Itgb3O54890 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Itgb3O54890 Ikbkb-201ENSMUST00000033939 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Itgb3O54890 Cfap74-204ENSMUST00000123952 2365 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Itgb3O54890 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC11.21□□□□□ -0.62
Itgb3O54890 Sema3b-203ENSMUST00000102530 3410 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Itgb3O54890 Olfr1156-202ENSMUST00000216191 3300 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Itgb3O54890 Zdhhc21-201ENSMUST00000030110 8763 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Itgb3O54890 Adam8-202ENSMUST00000106069 3117 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
Itgb3O54890 Adam8-201ENSMUST00000026546 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Itgb3O54890 Hif1an-201ENSMUST00000040455 6194 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Itgb3O54890 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Itgb3O54890 Dnmbp-206ENSMUST00000212592 3901 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Itgb3O54890 CT025681.1-201ENSMUST00000225453 1855 ntBASIC11.21□□□□□ -0.62
Itgb3O54890 Dcaf11-206ENSMUST00000128490 2660 ntAPPRIS P2 TSL 2 BASIC11.21□□□□□ -0.62
Itgb3O54890 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Itgb3O54890 Sh3gl2-204ENSMUST00000107189 3231 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Itgb3O54890 Amz1-202ENSMUST00000120630 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Itgb3O54890 Frmd4b-201ENSMUST00000032146 3159 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Itgb3O54890 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Itgb3O54890 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Itgb3O54890 Atcayos-203ENSMUST00000150782 3057 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Itgb3O54890 AC129336.1-201ENSMUST00000220224 2277 ntBASIC11.2□□□□□ -0.62
Itgb3O54890 Gm11470-201ENSMUST00000118868 1475 ntBASIC11.2□□□□□ -0.62
Itgb3O54890 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Itgb3O54890 Lin54-209ENSMUST00000152387 2760 ntTSL 5 BASIC11.2□□□□□ -0.62
Itgb3O54890 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Itgb3O54890 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Itgb3O54890 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Itgb3O54890 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Itgb3O54890 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Itgb3O54890 Nr1h4-201ENSMUST00000058126 1964 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Itgb3O54890 Srp14-202ENSMUST00000110862 587 ntTSL 2 BASIC11.2□□□□□ -0.62
Itgb3O54890 Mapk8-202ENSMUST00000111942 927 ntTSL 5 BASIC11.2□□□□□ -0.62
Itgb3O54890 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Itgb3O54890 Gm8216-201ENSMUST00000117232 601 ntBASIC11.2□□□□□ -0.62
Itgb3O54890 Gm11824-201ENSMUST00000120191 846 ntBASIC11.2□□□□□ -0.62
Itgb3O54890 2210408F21Rik-209ENSMUST00000146778 579 ntTSL 5 BASIC11.2□□□□□ -0.62
Itgb3O54890 Mid1-ps1-201ENSMUST00000167967 1248 ntBASIC11.2□□□□□ -0.62
Itgb3O54890 Auts2-216ENSMUST00000185450 144 ntTSL 5 BASIC11.2□□□□□ -0.62
Itgb3O54890 Gm37319-201ENSMUST00000193500 636 ntBASIC11.2□□□□□ -0.62
Itgb3O54890 Gm18555-201ENSMUST00000197935 584 ntBASIC11.2□□□□□ -0.62
Itgb3O54890 Gm9619-201ENSMUST00000211587 762 ntBASIC11.2□□□□□ -0.62
Itgb3O54890 Gm8557-201ENSMUST00000220777 475 ntBASIC11.2□□□□□ -0.62
Itgb3O54890 AC156790.2-201ENSMUST00000227115 568 ntBASIC11.2□□□□□ -0.62
Itgb3O54890 AC121567.1-201ENSMUST00000227213 842 ntBASIC11.2□□□□□ -0.62
Itgb3O54890 CT030652.1-201ENSMUST00000227377 1235 ntBASIC11.2□□□□□ -0.62
Itgb3O54890 AC164099.1-201ENSMUST00000227780 333 ntBASIC11.2□□□□□ -0.62
Itgb3O54890 Zfp646-201ENSMUST00000050383 6310 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Itgb3O54890 A1bg-201ENSMUST00000096418 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Itgb3O54890 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Itgb3O54890 Nf2-202ENSMUST00000056290 2394 ntAPPRIS ALT1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Itgb3O54890 Rsrc2-202ENSMUST00000057795 2270 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Itgb3O54890 Dnaja1-201ENSMUST00000030118 3376 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Itgb3O54890 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Itgb3O54890 Asap1-202ENSMUST00000110114 4409 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Itgb3O54890 Mkl1-204ENSMUST00000134469 4392 ntTSL 5 BASIC11.2□□□□□ -0.62
Itgb3O54890 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Itgb3O54890 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Itgb3O54890 Cyp7b1-201ENSMUST00000035625 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Itgb3O54890 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Itgb3O54890 Rps24-210ENSMUST00000225023 1613 ntAPPRIS P4 BASIC11.2□□□□□ -0.62
Itgb3O54890 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Itgb3O54890 Gm43625-201ENSMUST00000199177 1539 ntBASIC11.19□□□□□ -0.62
Itgb3O54890 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC11.19□□□□□ -0.62
Itgb3O54890 Mx2-201ENSMUST00000024112 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Itgb3O54890 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 104.7 ms