Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Atf6F6VAN0 Dcun1d4-203ENSMUST00000113558 4023 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Atf6F6VAN0 1700030K09Rik-202ENSMUST00000121902 2373 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Atf6F6VAN0 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Atf6F6VAN0 Kcne4-201ENSMUST00000057262 2657 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Atf6F6VAN0 Kansl1-201ENSMUST00000018556 5061 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Atf6F6VAN0 Hmgcr-201ENSMUST00000022176 4425 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Atf6F6VAN0 Gm15984-202ENSMUST00000156466 1534 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Atf6F6VAN0 Rad50-201ENSMUST00000020649 5153 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Atf6F6VAN0 A830018L16Rik-209ENSMUST00000179089 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Atf6F6VAN0 Gm27177-201ENSMUST00000183339 2946 ntTSL 5 BASIC10.88□□□□□ -0.67
Atf6F6VAN0 Trpc6-202ENSMUST00000214596 2913 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Atf6F6VAN0 Cuzd1-201ENSMUST00000046611 2256 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Atf6F6VAN0 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Atf6F6VAN0 Mapkbp1-201ENSMUST00000066058 6942 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Atf6F6VAN0 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Atf6F6VAN0 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Atf6F6VAN0 Gm43274-201ENSMUST00000202545 5000 ntBASIC10.88□□□□□ -0.67
Atf6F6VAN0 Ttll7-205ENSMUST00000170055 6075 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Atf6F6VAN0 Slc35c1-201ENSMUST00000067631 3139 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Atf6F6VAN0 Brpf1-208ENSMUST00000203577 4468 ntTSL 5 BASIC10.88□□□□□ -0.67
Atf6F6VAN0 Gm11735-201ENSMUST00000106377 1581 ntBASIC10.88□□□□□ -0.67
Atf6F6VAN0 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Atf6F6VAN0 Peg10-201ENSMUST00000166678 6662 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Atf6F6VAN0 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC10.88□□□□□ -0.67
Atf6F6VAN0 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC10.88□□□□□ -0.67
Atf6F6VAN0 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC10.88□□□□□ -0.67
Atf6F6VAN0 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Atf6F6VAN0 Gm9723-201ENSMUST00000192100 457 ntBASIC10.88□□□□□ -0.67
Atf6F6VAN0 Gm37365-201ENSMUST00000193109 409 ntBASIC10.88□□□□□ -0.67
Atf6F6VAN0 Gm43553-201ENSMUST00000200900 685 ntBASIC10.88□□□□□ -0.67
Atf6F6VAN0 Gm44216-201ENSMUST00000203942 157 ntBASIC10.88□□□□□ -0.67
Atf6F6VAN0 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC10.88□□□□□ -0.67
Atf6F6VAN0 Olfr258-ps1-202ENSMUST00000218625 1085 ntTSL 5 BASIC10.88□□□□□ -0.67
Atf6F6VAN0 Ubash3a-201ENSMUST00000048656 2945 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Atf6F6VAN0 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC10.88□□□□□ -0.67
Atf6F6VAN0 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC10.88□□□□□ -0.67
Atf6F6VAN0 5830411N06Rik-203ENSMUST00000164583 3342 ntAPPRIS P4 TSL 1 (best) BASIC10.88□□□□□ -0.67
Atf6F6VAN0 Gm10463-202ENSMUST00000195772 2889 ntBASIC10.88□□□□□ -0.67
Atf6F6VAN0 Ndufs1-203ENSMUST00000168099 2590 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Atf6F6VAN0 Nek3-204ENSMUST00000178324 1989 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Atf6F6VAN0 Cd247-205ENSMUST00000161559 1816 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Atf6F6VAN0 Gm45012-201ENSMUST00000208323 1666 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Atf6F6VAN0 Cdh15-201ENSMUST00000034443 3251 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Atf6F6VAN0 Fam13c-201ENSMUST00000062883 3262 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Atf6F6VAN0 Mical3-217ENSMUST00000207889 9204 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Atf6F6VAN0 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Atf6F6VAN0 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Atf6F6VAN0 Hectd2os-203ENSMUST00000142067 2662 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Atf6F6VAN0 Scnn1a-206ENSMUST00000176655 3354 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Atf6F6VAN0 Tbl3-202ENSMUST00000126319 5226 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Atf6F6VAN0 Stau2-216ENSMUST00000162627 2773 ntTSL 5 BASIC10.88□□□□□ -0.67
Atf6F6VAN0 Ppp2r2cos-201ENSMUST00000152862 1491 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Atf6F6VAN0 Smok4a-201ENSMUST00000074512 1455 ntBASIC10.87□□□□□ -0.67
Atf6F6VAN0 Gtf2i-219ENSMUST00000174155 4141 ntAPPRIS P4 TSL 2 BASIC10.87□□□□□ -0.67
Atf6F6VAN0 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Atf6F6VAN0 Sh3glb1-204ENSMUST00000199531 2584 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Atf6F6VAN0 Tmigd1-202ENSMUST00000102495 1427 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Atf6F6VAN0 Tceal8-204ENSMUST00000163584 2358 ntAPPRIS P1 TSL 3 BASIC10.87□□□□□ -0.67
Atf6F6VAN0 Arhgap36-202ENSMUST00000114904 3033 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Atf6F6VAN0 Gm5764-201ENSMUST00000118817 885 ntBASIC10.87□□□□□ -0.67
Atf6F6VAN0 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC10.87□□□□□ -0.67
Atf6F6VAN0 Gm14165-201ENSMUST00000121456 952 ntBASIC10.87□□□□□ -0.67
Atf6F6VAN0 Myl3-202ENSMUST00000124267 575 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Atf6F6VAN0 Gm45716-201ENSMUST00000124877 1256 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Atf6F6VAN0 Atad3aos-202ENSMUST00000150777 650 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Atf6F6VAN0 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Atf6F6VAN0 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Atf6F6VAN0 Pax5-212ENSMUST00000173733 885 ntTSL 5 BASIC10.87□□□□□ -0.67
Atf6F6VAN0 Gm24514-201ENSMUST00000174961 285 ntBASIC10.87□□□□□ -0.67
Atf6F6VAN0 Fam240b-201ENSMUST00000180282 1097 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Atf6F6VAN0 Gm29346-201ENSMUST00000188147 255 ntTSL 3 BASIC10.87□□□□□ -0.67
Atf6F6VAN0 Gm10046-201ENSMUST00000208208 632 ntTSL 2 BASIC10.87□□□□□ -0.67
Atf6F6VAN0 Gm44545-201ENSMUST00000208262 746 ntBASIC10.87□□□□□ -0.67
Atf6F6VAN0 Gm45166-201ENSMUST00000209073 683 ntBASIC10.87□□□□□ -0.67
Atf6F6VAN0 Gm45258-201ENSMUST00000210042 853 ntBASIC10.87□□□□□ -0.67
Atf6F6VAN0 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC10.87□□□□□ -0.67
Atf6F6VAN0 Acy1-211ENSMUST00000216400 1030 ntTSL 5 BASIC10.87□□□□□ -0.67
Atf6F6VAN0 Gm18514-201ENSMUST00000218980 436 ntBASIC10.87□□□□□ -0.67
Atf6F6VAN0 Prrxl1-205ENSMUST00000228878 723 ntBASIC10.87□□□□□ -0.67
Atf6F6VAN0 Gm7536-201ENSMUST00000077389 444 ntBASIC10.87□□□□□ -0.67
Atf6F6VAN0 Mir194-2-201ENSMUST00000083648 86 ntBASIC10.87□□□□□ -0.67
Atf6F6VAN0 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Atf6F6VAN0 Nln-205ENSMUST00000224945 2486 ntBASIC10.87□□□□□ -0.67
Atf6F6VAN0 Gosr2-201ENSMUST00000021329 3266 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Atf6F6VAN0 Mecomos-201ENSMUST00000125611 5510 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Atf6F6VAN0 Zbtb21-203ENSMUST00000113734 6010 ntAPPRIS P4 TSL 2 BASIC10.87□□□□□ -0.67
Atf6F6VAN0 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Atf6F6VAN0 Icam1-201ENSMUST00000086399 2535 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Atf6F6VAN0 Clasp2-201ENSMUST00000111838 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Atf6F6VAN0 Ints3-201ENSMUST00000029542 4337 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Atf6F6VAN0 Gm26822-201ENSMUST00000181732 3374 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Atf6F6VAN0 Prr16-201ENSMUST00000116639 2224 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Atf6F6VAN0 AC125351.1-201ENSMUST00000221438 2223 ntBASIC10.86□□□□□ -0.67
Atf6F6VAN0 Pabpc4-201ENSMUST00000078734 2700 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Atf6F6VAN0 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Atf6F6VAN0 Cxcl11-201ENSMUST00000077820 1581 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Atf6F6VAN0 Unc79-202ENSMUST00000101099 8874 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Atf6F6VAN0 Tmem184a-202ENSMUST00000110832 4326 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Atf6F6VAN0 Gal3st4-201ENSMUST00000100530 3162 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms