Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Nkx6-1Q99MA9 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Nkx6-1Q99MA9 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Nkx6-1Q99MA9 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Nkx6-1Q99MA9 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC10.05□□□□□ -0.8
Nkx6-1Q99MA9 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Nkx6-1Q99MA9 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Nkx6-1Q99MA9 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Nkx6-1Q99MA9 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Nkx6-1Q99MA9 Psd2-203ENSMUST00000175734 4300 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Nkx6-1Q99MA9 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Nkx6-1Q99MA9 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Nkx6-1Q99MA9 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Nkx6-1Q99MA9 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Nkx6-1Q99MA9 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Nkx6-1Q99MA9 Snora68-201ENSMUST00000104375 131 ntBASIC10.05□□□□□ -0.8
Nkx6-1Q99MA9 Tomm5-203ENSMUST00000107809 738 ntTSL 3 BASIC10.05□□□□□ -0.8
Nkx6-1Q99MA9 Olfr1372-ps1-201ENSMUST00000121007 934 ntBASIC10.05□□□□□ -0.8
Nkx6-1Q99MA9 Gm45591-201ENSMUST00000129058 843 ntTSL 3 BASIC10.05□□□□□ -0.8
Nkx6-1Q99MA9 Gm24346-201ENSMUST00000158712 194 ntBASIC10.05□□□□□ -0.8
Nkx6-1Q99MA9 Gm16268-201ENSMUST00000159445 1157 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Nkx6-1Q99MA9 Mipep-ps-201ENSMUST00000177439 291 ntBASIC10.05□□□□□ -0.8
Nkx6-1Q99MA9 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC10.05□□□□□ -0.8
Nkx6-1Q99MA9 Gm26610-201ENSMUST00000181529 1024 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Nkx6-1Q99MA9 Rian-215ENSMUST00000183180 633 ntTSL 5 BASIC10.05□□□□□ -0.8
Nkx6-1Q99MA9 Gm18443-201ENSMUST00000185358 556 ntBASIC10.05□□□□□ -0.8
Nkx6-1Q99MA9 Gm34816-201ENSMUST00000193363 502 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Nkx6-1Q99MA9 Gm6677-201ENSMUST00000195100 441 ntBASIC10.05□□□□□ -0.8
Nkx6-1Q99MA9 Gm37885-202ENSMUST00000195868 685 ntTSL 3 BASIC10.05□□□□□ -0.8
Nkx6-1Q99MA9 Gm5291-201ENSMUST00000201965 899 ntBASIC10.05□□□□□ -0.8
Nkx6-1Q99MA9 Saa-ps-201ENSMUST00000211148 320 ntBASIC10.05□□□□□ -0.8
Nkx6-1Q99MA9 Gm19990-201ENSMUST00000219468 1224 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Nkx6-1Q99MA9 CT572999.1-201ENSMUST00000220315 1260 ntBASIC10.05□□□□□ -0.8
Nkx6-1Q99MA9 AC139155.1-201ENSMUST00000226043 444 ntBASIC10.05□□□□□ -0.8
Nkx6-1Q99MA9 4933400A11Rik-202ENSMUST00000068894 1217 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Nkx6-1Q99MA9 Gm10617-201ENSMUST00000098368 1172 ntBASIC10.05□□□□□ -0.8
Nkx6-1Q99MA9 4930566F21Rik-201ENSMUST00000201177 1535 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Nkx6-1Q99MA9 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Nkx6-1Q99MA9 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Nkx6-1Q99MA9 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Nkx6-1Q99MA9 Vcan-202ENSMUST00000109544 5702 ntTSL 5 BASIC10.05□□□□□ -0.8
Nkx6-1Q99MA9 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Nkx6-1Q99MA9 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Nkx6-1Q99MA9 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Nkx6-1Q99MA9 Gm36987-201ENSMUST00000194704 2979 ntBASIC10.05□□□□□ -0.8
Nkx6-1Q99MA9 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Nkx6-1Q99MA9 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Nkx6-1Q99MA9 AC131081.1-201ENSMUST00000219535 1736 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Nkx6-1Q99MA9 AC158777.1-201ENSMUST00000226216 1724 ntBASIC10.04□□□□□ -0.8
Nkx6-1Q99MA9 Faf2-201ENSMUST00000026991 1748 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Nkx6-1Q99MA9 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Nkx6-1Q99MA9 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Nkx6-1Q99MA9 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Nkx6-1Q99MA9 Olfr1156-202ENSMUST00000216191 3300 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Nkx6-1Q99MA9 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Nkx6-1Q99MA9 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Nkx6-1Q99MA9 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Nkx6-1Q99MA9 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Nkx6-1Q99MA9 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Nkx6-1Q99MA9 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Nkx6-1Q99MA9 Gm45719-201ENSMUST00000207954 1662 ntBASIC10.04□□□□□ -0.8
Nkx6-1Q99MA9 Dpm1-202ENSMUST00000109193 1076 ntTSL 5 BASIC10.04□□□□□ -0.8
Nkx6-1Q99MA9 Mir1190-201ENSMUST00000116925 96 ntBASIC10.04□□□□□ -0.8
Nkx6-1Q99MA9 Gm15476-201ENSMUST00000118247 1191 ntBASIC10.04□□□□□ -0.8
Nkx6-1Q99MA9 Gm6517-201ENSMUST00000121056 511 ntBASIC10.04□□□□□ -0.8
Nkx6-1Q99MA9 Gm11465-201ENSMUST00000127942 435 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Nkx6-1Q99MA9 Nr6a1os-201ENSMUST00000129089 645 ntTSL 2 BASIC10.04□□□□□ -0.8
Nkx6-1Q99MA9 Gm6425-201ENSMUST00000136332 790 ntBASIC10.04□□□□□ -0.8
Nkx6-1Q99MA9 2010204K13Rik-203ENSMUST00000150671 885 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Nkx6-1Q99MA9 Gm26379-201ENSMUST00000178125 138 ntBASIC10.04□□□□□ -0.8
Nkx6-1Q99MA9 Gm26532-201ENSMUST00000180630 690 ntBASIC10.04□□□□□ -0.8
Nkx6-1Q99MA9 Gm16894-201ENSMUST00000181756 842 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Nkx6-1Q99MA9 Gm17733-201ENSMUST00000181883 1048 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Nkx6-1Q99MA9 Gm17797-201ENSMUST00000182175 997 ntBASIC10.04□□□□□ -0.8
Nkx6-1Q99MA9 Krtap6-3-202ENSMUST00000185581 520 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Nkx6-1Q99MA9 Pik3r4-206ENSMUST00000188784 1295 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Nkx6-1Q99MA9 Gm6546-201ENSMUST00000192096 766 ntBASIC10.04□□□□□ -0.8
Nkx6-1Q99MA9 Gm40414-201ENSMUST00000197608 481 ntBASIC10.04□□□□□ -0.8
Nkx6-1Q99MA9 Gm5149-202ENSMUST00000199980 1250 ntTSL 2 BASIC10.04□□□□□ -0.8
Nkx6-1Q99MA9 Gm6008-201ENSMUST00000206542 874 ntBASIC10.04□□□□□ -0.8
Nkx6-1Q99MA9 Olfr1460-ps1-201ENSMUST00000208975 899 ntBASIC10.04□□□□□ -0.8
Nkx6-1Q99MA9 AC160929.1-201ENSMUST00000221247 415 ntBASIC10.04□□□□□ -0.8
Nkx6-1Q99MA9 Gm19605-205ENSMUST00000221712 677 ntTSL 3 BASIC10.04□□□□□ -0.8
Nkx6-1Q99MA9 AC165260.2-201ENSMUST00000225371 395 ntBASIC10.04□□□□□ -0.8
Nkx6-1Q99MA9 CT009550.1-201ENSMUST00000225750 864 ntBASIC10.04□□□□□ -0.8
Nkx6-1Q99MA9 CT025679.1-201ENSMUST00000227106 449 ntBASIC10.04□□□□□ -0.8
Nkx6-1Q99MA9 Gal-201ENSMUST00000025842 712 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Nkx6-1Q99MA9 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Nkx6-1Q99MA9 Olfr47-201ENSMUST00000078057 1059 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Nkx6-1Q99MA9 Krtap6-3-201ENSMUST00000079151 444 ntBASIC10.04□□□□□ -0.8
Nkx6-1Q99MA9 Slfn3-201ENSMUST00000019130 1816 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Nkx6-1Q99MA9 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Nkx6-1Q99MA9 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Nkx6-1Q99MA9 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Nkx6-1Q99MA9 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Nkx6-1Q99MA9 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Nkx6-1Q99MA9 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Nkx6-1Q99MA9 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Nkx6-1Q99MA9 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Nkx6-1Q99MA9 C920021L13Rik-201ENSMUST00000120398 1723 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms