Protein–RNA interactions for Protein: Q8CI71

Vps50, Syndetin, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps50Q8CI71 AC153152.3-201ENSMUST00000222188 1135 ntBASIC10.46□□□□□ -0.73
Vps50Q8CI71 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Vps50Q8CI71 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Vps50Q8CI71 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Vps50Q8CI71 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC10.46□□□□□ -0.74
Vps50Q8CI71 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Vps50Q8CI71 Myo1c-203ENSMUST00000102505 4652 ntAPPRIS ALT1 TSL 5 BASIC10.46□□□□□ -0.74
Vps50Q8CI71 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC10.46□□□□□ -0.74
Vps50Q8CI71 Oprm1-213ENSMUST00000105604 1616 ntAPPRIS ALT1 TSL 5 BASIC10.46□□□□□ -0.74
Vps50Q8CI71 Cyp7b1-201ENSMUST00000035625 2166 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Vps50Q8CI71 Akap1-203ENSMUST00000107904 2673 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.74
Vps50Q8CI71 Gm44745-201ENSMUST00000206563 2723 ntBASIC10.46□□□□□ -0.74
Vps50Q8CI71 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Vps50Q8CI71 Ticam1-201ENSMUST00000058136 2992 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Vps50Q8CI71 Smyd1-202ENSMUST00000114186 3292 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Vps50Q8CI71 5830411N06Rik-203ENSMUST00000164583 3342 ntAPPRIS P4 TSL 1 (best) BASIC10.46□□□□□ -0.74
Vps50Q8CI71 Ampd2-203ENSMUST00000102638 3650 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
Vps50Q8CI71 Pard3-201ENSMUST00000026921 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Vps50Q8CI71 Brpf1-208ENSMUST00000203577 4468 ntTSL 5 BASIC10.46□□□□□ -0.74
Vps50Q8CI71 5730455P16Rik-204ENSMUST00000179332 4536 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.74
Vps50Q8CI71 Lhx9-201ENSMUST00000019374 4937 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Vps50Q8CI71 Pcdha4-201ENSMUST00000192295 4129 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Vps50Q8CI71 Cnppd1-202ENSMUST00000168720 3669 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Vps50Q8CI71 Idua-203ENSMUST00000119212 3022 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Vps50Q8CI71 Oprl1-205ENSMUST00000108768 2914 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Vps50Q8CI71 Slc7a3-202ENSMUST00000101362 2371 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Vps50Q8CI71 A930007I19Rik-201ENSMUST00000180737 2319 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Vps50Q8CI71 Zfp352-202ENSMUST00000107129 2276 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Vps50Q8CI71 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC10.45□□□□□ -0.74
Vps50Q8CI71 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Vps50Q8CI71 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Vps50Q8CI71 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Vps50Q8CI71 Gpat4-201ENSMUST00000167004 5518 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Vps50Q8CI71 Ttll9-201ENSMUST00000099197 1797 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Vps50Q8CI71 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Vps50Q8CI71 Xlr4c-201ENSMUST00000068551 1500 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Vps50Q8CI71 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Vps50Q8CI71 Gm3139-202ENSMUST00000201138 1303 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Vps50Q8CI71 Gm3183-203ENSMUST00000202911 1303 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Vps50Q8CI71 Dhtkd1-201ENSMUST00000026924 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Vps50Q8CI71 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Vps50Q8CI71 Gm15528-201ENSMUST00000117821 864 ntBASIC10.45□□□□□ -0.74
Vps50Q8CI71 Gm13351-201ENSMUST00000118087 414 ntBASIC10.45□□□□□ -0.74
Vps50Q8CI71 Gm4917-201ENSMUST00000121452 650 ntBASIC10.45□□□□□ -0.74
Vps50Q8CI71 Mir1905-201ENSMUST00000122779 82 ntBASIC10.45□□□□□ -0.74
Vps50Q8CI71 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC10.45□□□□□ -0.74
Vps50Q8CI71 Gm24992-201ENSMUST00000157412 130 ntBASIC10.45□□□□□ -0.74
Vps50Q8CI71 Gm8451-201ENSMUST00000170338 447 ntBASIC10.45□□□□□ -0.74
Vps50Q8CI71 Gm21778-201ENSMUST00000178779 471 ntBASIC10.45□□□□□ -0.74
Vps50Q8CI71 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Vps50Q8CI71 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC10.45□□□□□ -0.74
Vps50Q8CI71 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC10.45□□□□□ -0.74
Vps50Q8CI71 Bcl2l12-205ENSMUST00000207755 605 ntAPPRIS ALT2 TSL 2 BASIC10.45□□□□□ -0.74
Vps50Q8CI71 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Vps50Q8CI71 AC122891.1-201ENSMUST00000218671 268 ntBASIC10.45□□□□□ -0.74
Vps50Q8CI71 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Vps50Q8CI71 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Vps50Q8CI71 Gm7536-201ENSMUST00000077389 444 ntBASIC10.45□□□□□ -0.74
Vps50Q8CI71 Gm5453-201ENSMUST00000080866 447 ntBASIC10.45□□□□□ -0.74
Vps50Q8CI71 Nutf2-ps1-201ENSMUST00000095978 864 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Vps50Q8CI71 Trim17-201ENSMUST00000047697 3664 ntTSL 2 BASIC10.45□□□□□ -0.74
Vps50Q8CI71 Nfkbiz-204ENSMUST00000114458 3627 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Vps50Q8CI71 AC115746.1-201ENSMUST00000228949 3617 ntBASIC10.45□□□□□ -0.74
Vps50Q8CI71 Ilf3-201ENSMUST00000067646 3549 ntAPPRIS P4 TSL 1 (best) BASIC10.45□□□□□ -0.74
Vps50Q8CI71 Exoc3l4-210ENSMUST00000223050 3418 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Vps50Q8CI71 Ank3-242ENSMUST00000183261 4999 ntTSL 5 BASIC10.45□□□□□ -0.74
Vps50Q8CI71 Acsbg1-201ENSMUST00000034822 2880 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Vps50Q8CI71 P3h1-202ENSMUST00000081606 2820 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Vps50Q8CI71 Srcap-201ENSMUST00000066582 4545 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Vps50Q8CI71 Acsm5-205ENSMUST00000207440 2494 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Vps50Q8CI71 Urb1-203ENSMUST00000140920 7344 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Vps50Q8CI71 Oprm1-216ENSMUST00000105611 2420 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Vps50Q8CI71 Tns3-201ENSMUST00000020695 7483 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Vps50Q8CI71 Actn2-201ENSMUST00000064204 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Vps50Q8CI71 AC154849.3-201ENSMUST00000223733 1660 ntBASIC10.44□□□□□ -0.74
Vps50Q8CI71 Lrrc49-204ENSMUST00000114034 2779 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Vps50Q8CI71 Mpp1-202ENSMUST00000114091 1558 ntTSL 2 BASIC10.44□□□□□ -0.74
Vps50Q8CI71 Nudt13-207ENSMUST00000224311 1574 ntBASIC10.44□□□□□ -0.74
Vps50Q8CI71 St6galnac4-201ENSMUST00000102818 3626 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Vps50Q8CI71 G3bp1-201ENSMUST00000018727 6703 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Vps50Q8CI71 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Vps50Q8CI71 Mefv-202ENSMUST00000100222 3249 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Vps50Q8CI71 Dgcr2-201ENSMUST00000012152 4045 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Vps50Q8CI71 Btrc-206ENSMUST00000224102 3037 ntBASIC10.44□□□□□ -0.74
Vps50Q8CI71 Gm23061-201ENSMUST00000102348 116 ntBASIC10.44□□□□□ -0.74
Vps50Q8CI71 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Vps50Q8CI71 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Vps50Q8CI71 Gm14740-201ENSMUST00000118538 1150 ntBASIC10.44□□□□□ -0.74
Vps50Q8CI71 Gm13323-201ENSMUST00000120245 1151 ntBASIC10.44□□□□□ -0.74
Vps50Q8CI71 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC10.44□□□□□ -0.74
Vps50Q8CI71 Gm4753-201ENSMUST00000188327 1255 ntBASIC10.44□□□□□ -0.74
Vps50Q8CI71 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC10.44□□□□□ -0.74
Vps50Q8CI71 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Vps50Q8CI71 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC10.44□□□□□ -0.74
Vps50Q8CI71 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC10.44□□□□□ -0.74
Vps50Q8CI71 AC122024.3-201ENSMUST00000217719 294 ntBASIC10.44□□□□□ -0.74
Vps50Q8CI71 AC154184.3-201ENSMUST00000225620 1090 ntBASIC10.44□□□□□ -0.74
Vps50Q8CI71 AC154572.1-201ENSMUST00000226098 1204 ntBASIC10.44□□□□□ -0.74
Vps50Q8CI71 CT025602.2-201ENSMUST00000226553 772 ntBASIC10.44□□□□□ -0.74
Vps50Q8CI71 Spata16-201ENSMUST00000047005 2022 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms