Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC10.43□□□□□ -0.74
Ccdc28bQ8CEG5 Zfp324-201ENSMUST00000038701 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ccdc28bQ8CEG5 Gm42633-201ENSMUST00000198853 2764 ntBASIC10.43□□□□□ -0.74
Ccdc28bQ8CEG5 Sec22c-201ENSMUST00000078547 5713 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ccdc28bQ8CEG5 Limk1-202ENSMUST00000111233 3109 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Ccdc28bQ8CEG5 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Ccdc28bQ8CEG5 Akap12-202ENSMUST00000215696 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ccdc28bQ8CEG5 Arel1-201ENSMUST00000043169 5446 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ccdc28bQ8CEG5 Cenpn-203ENSMUST00000212263 1616 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Ccdc28bQ8CEG5 Krt34-201ENSMUST00000056362 1609 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ccdc28bQ8CEG5 Son-202ENSMUST00000114037 8399 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ccdc28bQ8CEG5 Map1a-202ENSMUST00000110639 10145 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Ccdc28bQ8CEG5 Iqcg-202ENSMUST00000115100 2916 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ccdc28bQ8CEG5 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC10.43□□□□□ -0.74
Ccdc28bQ8CEG5 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Ccdc28bQ8CEG5 Xrcc2-201ENSMUST00000030773 3247 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ccdc28bQ8CEG5 Gm15604-201ENSMUST00000118350 1456 ntBASIC10.42□□□□□ -0.74
Ccdc28bQ8CEG5 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Ccdc28bQ8CEG5 C130026L21Rik-204ENSMUST00000199587 1838 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Ccdc28bQ8CEG5 Ackr2-202ENSMUST00000214340 3015 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ccdc28bQ8CEG5 Nkap-201ENSMUST00000016553 4230 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ccdc28bQ8CEG5 Thsd7b-202ENSMUST00000073527 6213 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ccdc28bQ8CEG5 Atp2b2-202ENSMUST00000101044 4586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ccdc28bQ8CEG5 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Ccdc28bQ8CEG5 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC10.42□□□□□ -0.74
Ccdc28bQ8CEG5 Gm19027-201ENSMUST00000187291 1355 ntBASIC10.42□□□□□ -0.74
Ccdc28bQ8CEG5 Gm5308-201ENSMUST00000196752 1354 ntBASIC10.42□□□□□ -0.74
Ccdc28bQ8CEG5 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ccdc28bQ8CEG5 Atp9a-202ENSMUST00000109175 3729 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Ccdc28bQ8CEG5 Mlph-201ENSMUST00000027528 4499 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ccdc28bQ8CEG5 Pkd2l2-202ENSMUST00000166156 2132 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ccdc28bQ8CEG5 C920021L13Rik-201ENSMUST00000120398 1723 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Ccdc28bQ8CEG5 1700019J19Rik-205ENSMUST00000216531 2813 ntTSL 5 BASIC10.42□□□□□ -0.74
Ccdc28bQ8CEG5 Zmat1-201ENSMUST00000064659 3501 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ccdc28bQ8CEG5 Ophn1-202ENSMUST00000113826 2794 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ccdc28bQ8CEG5 Pvt1-203ENSMUST00000181657 2798 ntTSL 5 BASIC10.42□□□□□ -0.74
Ccdc28bQ8CEG5 Vmn1r181-205ENSMUST00000228399 4616 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Ccdc28bQ8CEG5 Parp1-201ENSMUST00000027777 3873 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ccdc28bQ8CEG5 Gm13497-201ENSMUST00000139497 2038 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Ccdc28bQ8CEG5 Lrrk2-201ENSMUST00000060642 8275 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ccdc28bQ8CEG5 Cyp4a12b-201ENSMUST00000094887 2395 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ccdc28bQ8CEG5 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Ccdc28bQ8CEG5 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC10.42□□□□□ -0.74
Ccdc28bQ8CEG5 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Ccdc28bQ8CEG5 Gm12749-201ENSMUST00000122138 1159 ntBASIC10.42□□□□□ -0.74
Ccdc28bQ8CEG5 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ccdc28bQ8CEG5 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Ccdc28bQ8CEG5 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Ccdc28bQ8CEG5 Gm10774-201ENSMUST00000188689 204 ntBASIC10.42□□□□□ -0.74
Ccdc28bQ8CEG5 Gm35584-201ENSMUST00000191767 641 ntTSL 5 BASIC10.42□□□□□ -0.74
Ccdc28bQ8CEG5 Gm6677-201ENSMUST00000195100 441 ntBASIC10.42□□□□□ -0.74
Ccdc28bQ8CEG5 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC10.42□□□□□ -0.74
Ccdc28bQ8CEG5 Gm7319-201ENSMUST00000210047 778 ntBASIC10.42□□□□□ -0.74
Ccdc28bQ8CEG5 Gm18212-201ENSMUST00000211678 889 ntBASIC10.42□□□□□ -0.74
Ccdc28bQ8CEG5 Mt1-202ENSMUST00000211807 1085 ntBASIC10.42□□□□□ -0.74
Ccdc28bQ8CEG5 AC154290.1-201ENSMUST00000223786 1240 ntBASIC10.42□□□□□ -0.74
Ccdc28bQ8CEG5 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ccdc28bQ8CEG5 Calr4-201ENSMUST00000030285 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ccdc28bQ8CEG5 Gsdma3-202ENSMUST00000107508 1587 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Ccdc28bQ8CEG5 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ccdc28bQ8CEG5 Serpinb9c-201ENSMUST00000021837 1902 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ccdc28bQ8CEG5 Gulo-201ENSMUST00000059970 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ccdc28bQ8CEG5 Ggcx-201ENSMUST00000065906 2929 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ccdc28bQ8CEG5 BC017643-202ENSMUST00000106115 2239 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ccdc28bQ8CEG5 Myo5a-201ENSMUST00000123128 11702 ntTSL 5 BASIC10.42□□□□□ -0.74
Ccdc28bQ8CEG5 Gm45336-201ENSMUST00000210010 3230 ntTSL 5 BASIC10.42□□□□□ -0.74
Ccdc28bQ8CEG5 Plxna3-201ENSMUST00000004326 6943 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ccdc28bQ8CEG5 Nrf1-205ENSMUST00000115200 2491 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Ccdc28bQ8CEG5 Gm37583-201ENSMUST00000195460 2487 ntBASIC10.42□□□□□ -0.74
Ccdc28bQ8CEG5 Gm16576-201ENSMUST00000128342 5404 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Ccdc28bQ8CEG5 Gm5592-201ENSMUST00000097044 3033 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ccdc28bQ8CEG5 Gm12159-201ENSMUST00000143869 1447 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Ccdc28bQ8CEG5 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ccdc28bQ8CEG5 Slc6a12-209ENSMUST00000171008 1674 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Ccdc28bQ8CEG5 Gm45012-201ENSMUST00000208323 1666 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Ccdc28bQ8CEG5 AC116589.5-201ENSMUST00000222230 1660 ntTSL 5 BASIC10.41□□□□□ -0.74
Ccdc28bQ8CEG5 Fyco1-202ENSMUST00000167595 7692 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Ccdc28bQ8CEG5 Zfp474-201ENSMUST00000072666 1930 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ccdc28bQ8CEG5 9330175E14Rik-201ENSMUST00000180445 4852 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Ccdc28bQ8CEG5 Cacna1c-219ENSMUST00000189389 6603 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Ccdc28bQ8CEG5 Armc9-201ENSMUST00000027434 5127 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Ccdc28bQ8CEG5 Carmil1-202ENSMUST00000110398 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ccdc28bQ8CEG5 Tmem63a-201ENSMUST00000027800 3306 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ccdc28bQ8CEG5 Bcl2l1-206ENSMUST00000140436 1865 ntTSL 2 BASIC10.41□□□□□ -0.74
Ccdc28bQ8CEG5 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Ccdc28bQ8CEG5 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Ccdc28bQ8CEG5 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC10.41□□□□□ -0.74
Ccdc28bQ8CEG5 Gm14127-201ENSMUST00000117906 678 ntBASIC10.41□□□□□ -0.74
Ccdc28bQ8CEG5 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ccdc28bQ8CEG5 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC10.41□□□□□ -0.74
Ccdc28bQ8CEG5 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC10.41□□□□□ -0.74
Ccdc28bQ8CEG5 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC10.41□□□□□ -0.74
Ccdc28bQ8CEG5 Gm37246-201ENSMUST00000192665 835 ntBASIC10.41□□□□□ -0.74
Ccdc28bQ8CEG5 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ccdc28bQ8CEG5 Gm18466-201ENSMUST00000209147 499 ntBASIC10.41□□□□□ -0.74
Ccdc28bQ8CEG5 Gm5599-201ENSMUST00000209602 788 ntBASIC10.41□□□□□ -0.74
Ccdc28bQ8CEG5 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC10.41□□□□□ -0.74
Ccdc28bQ8CEG5 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Ccdc28bQ8CEG5 AC153512.3-201ENSMUST00000220426 662 ntTSL 3 BASIC10.41□□□□□ -0.74
Ccdc28bQ8CEG5 CT010506.1-201ENSMUST00000223673 349 ntBASIC10.41□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 91.4 ms