Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Zdhhc21-201ENSMUST00000030110 8763 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Alx1Q8C8B0 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Alx1Q8C8B0 Tmem67-202ENSMUST00000108293 3945 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Alx1Q8C8B0 Mkrn1-ps1-201ENSMUST00000122035 1390 ntBASIC12.3□□□□□ -0.44
Alx1Q8C8B0 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Alx1Q8C8B0 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Alx1Q8C8B0 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
Alx1Q8C8B0 St5-201ENSMUST00000077909 4612 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
Alx1Q8C8B0 Amz1-202ENSMUST00000120630 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Alx1Q8C8B0 Zbtb3-201ENSMUST00000172175 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Alx1Q8C8B0 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Alx1Q8C8B0 Gm8873-201ENSMUST00000217847 1439 ntBASIC12.3□□□□□ -0.44
Alx1Q8C8B0 Cers3-201ENSMUST00000066475 3250 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Alx1Q8C8B0 Dnajc14-202ENSMUST00000217745 4133 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Alx1Q8C8B0 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Alx1Q8C8B0 Dcun1d2-203ENSMUST00000110839 2937 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Alx1Q8C8B0 St6galnac2-206ENSMUST00000144398 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Alx1Q8C8B0 Nxpe1-ps-201ENSMUST00000209981 1454 ntBASIC12.3□□□□□ -0.44
Alx1Q8C8B0 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC12.3□□□□□ -0.44
Alx1Q8C8B0 Spaca9-201ENSMUST00000102877 671 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Alx1Q8C8B0 Rpl7a-201ENSMUST00000102898 914 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Alx1Q8C8B0 Igkv3-9-201ENSMUST00000103398 359 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Alx1Q8C8B0 Cryzl1-202ENSMUST00000114023 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Alx1Q8C8B0 Cryzl1-206ENSMUST00000124282 1187 ntTSL 5 BASIC12.3□□□□□ -0.44
Alx1Q8C8B0 Gm14222-201ENSMUST00000128681 575 ntTSL 2 BASIC12.3□□□□□ -0.44
Alx1Q8C8B0 Gm15912-201ENSMUST00000128914 578 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Alx1Q8C8B0 4930538E20Rik-201ENSMUST00000131383 546 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Alx1Q8C8B0 Tnni1-204ENSMUST00000139986 651 ntTSL 5 BASIC12.3□□□□□ -0.44
Alx1Q8C8B0 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC12.3□□□□□ -0.44
Alx1Q8C8B0 Gm12906-201ENSMUST00000154610 441 ntBASIC12.3□□□□□ -0.44
Alx1Q8C8B0 Mir6360-201ENSMUST00000184278 126 ntBASIC12.3□□□□□ -0.44
Alx1Q8C8B0 Gm9916-201ENSMUST00000192943 1228 ntBASIC12.3□□□□□ -0.44
Alx1Q8C8B0 Nme6-214ENSMUST00000200468 865 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Alx1Q8C8B0 Ghrl-203ENSMUST00000203588 237 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Alx1Q8C8B0 Gm45728-201ENSMUST00000211475 2979 ntBASIC12.3□□□□□ -0.44
Alx1Q8C8B0 Gm35239-201ENSMUST00000218346 487 ntTSL 3 BASIC12.3□□□□□ -0.44
Alx1Q8C8B0 CT010505.2-201ENSMUST00000227918 998 ntBASIC12.3□□□□□ -0.44
Alx1Q8C8B0 Prss51-201ENSMUST00000063785 961 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Alx1Q8C8B0 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Alx1Q8C8B0 Bbs7-201ENSMUST00000040148 2599 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Alx1Q8C8B0 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Alx1Q8C8B0 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC12.3□□□□□ -0.44
Alx1Q8C8B0 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC12.3□□□□□ -0.44
Alx1Q8C8B0 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Alx1Q8C8B0 Ino80dos-201ENSMUST00000138611 1576 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Alx1Q8C8B0 Specc1l-204ENSMUST00000218766 4725 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Alx1Q8C8B0 Plbd1-201ENSMUST00000032336 2010 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Alx1Q8C8B0 Gm43737-201ENSMUST00000199915 2740 ntBASIC12.3□□□□□ -0.44
Alx1Q8C8B0 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Alx1Q8C8B0 Cd6-203ENSMUST00000080292 3032 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Alx1Q8C8B0 Oplah-201ENSMUST00000023222 3970 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Alx1Q8C8B0 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Alx1Q8C8B0 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Alx1Q8C8B0 Gm16702-201ENSMUST00000181180 2384 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Alx1Q8C8B0 AC122382.1-201ENSMUST00000225869 2371 ntBASIC12.29□□□□□ -0.44
Alx1Q8C8B0 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Alx1Q8C8B0 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Alx1Q8C8B0 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Alx1Q8C8B0 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Alx1Q8C8B0 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Alx1Q8C8B0 Cd3e-201ENSMUST00000102832 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Alx1Q8C8B0 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
Alx1Q8C8B0 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Alx1Q8C8B0 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Alx1Q8C8B0 Rasgrp1-204ENSMUST00000173252 1750 ntTSL 5 BASIC12.29□□□□□ -0.44
Alx1Q8C8B0 Mapk8-202ENSMUST00000111942 927 ntTSL 5 BASIC12.29□□□□□ -0.44
Alx1Q8C8B0 Ppt1-204ENSMUST00000121870 986 ntTSL 2 BASIC12.29□□□□□ -0.44
Alx1Q8C8B0 Gm12927-201ENSMUST00000150252 373 ntTSL 2 BASIC12.29□□□□□ -0.44
Alx1Q8C8B0 Gm16574-201ENSMUST00000159301 745 ntBASIC12.29□□□□□ -0.44
Alx1Q8C8B0 Mid1-ps1-201ENSMUST00000167967 1248 ntBASIC12.29□□□□□ -0.44
Alx1Q8C8B0 Gal3st2b-201ENSMUST00000177958 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Alx1Q8C8B0 Gm6606-201ENSMUST00000193613 947 ntBASIC12.29□□□□□ -0.44
Alx1Q8C8B0 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC12.29□□□□□ -0.44
Alx1Q8C8B0 Gm36862-204ENSMUST00000223365 642 ntTSL 3 BASIC12.29□□□□□ -0.44
Alx1Q8C8B0 AC156790.2-201ENSMUST00000227115 568 ntBASIC12.29□□□□□ -0.44
Alx1Q8C8B0 Ndufc1-201ENSMUST00000038108 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Alx1Q8C8B0 Col9a1-201ENSMUST00000054588 3834 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Alx1Q8C8B0 Rps9-201ENSMUST00000006496 751 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Alx1Q8C8B0 Gm8325-201ENSMUST00000099086 453 ntBASIC12.29□□□□□ -0.44
Alx1Q8C8B0 Olfr1199-201ENSMUST00000099813 933 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Alx1Q8C8B0 Fam13c-203ENSMUST00000173042 3310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Alx1Q8C8B0 Drc3-201ENSMUST00000070805 2061 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Alx1Q8C8B0 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC12.29□□□□□ -0.44
Alx1Q8C8B0 Uimc1-204ENSMUST00000127195 2936 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Alx1Q8C8B0 Ttll5-205ENSMUST00000110224 4647 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Alx1Q8C8B0 Ampd2-203ENSMUST00000102638 3650 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Alx1Q8C8B0 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Alx1Q8C8B0 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Alx1Q8C8B0 Pfkfb3-215ENSMUST00000183869 1478 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Alx1Q8C8B0 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Alx1Q8C8B0 Ddr1-202ENSMUST00000097333 3593 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Alx1Q8C8B0 Fam234b-201ENSMUST00000111915 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Alx1Q8C8B0 AC126459.1-201ENSMUST00000214791 2123 ntBASIC12.28□□□□□ -0.44
Alx1Q8C8B0 Gm10406-201ENSMUST00000100895 1813 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Alx1Q8C8B0 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Alx1Q8C8B0 Slc13a5-205ENSMUST00000208056 3111 ntTSL 5 BASIC12.28□□□□□ -0.44
Alx1Q8C8B0 Mtbp-201ENSMUST00000022998 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Alx1Q8C8B0 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Alx1Q8C8B0 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Alx1Q8C8B0 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 148.3 ms