Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Zfp42-201ENSMUST00000082120 1772 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trub1Q8C0D0 Psd2-203ENSMUST00000175734 4300 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trub1Q8C0D0 Ints3-201ENSMUST00000029542 4337 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trub1Q8C0D0 5830411N06Rik-203ENSMUST00000164583 3342 ntAPPRIS P4 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trub1Q8C0D0 H2-T3-204ENSMUST00000102675 2312 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trub1Q8C0D0 Arhgap36-202ENSMUST00000114904 3033 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trub1Q8C0D0 Gm13498-201ENSMUST00000119159 2166 ntBASIC10.87□□□□□ -0.67
Trub1Q8C0D0 Mindy4-201ENSMUST00000053094 4270 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trub1Q8C0D0 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Trub1Q8C0D0 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trub1Q8C0D0 Ep400-210ENSMUST00000146458 3673 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trub1Q8C0D0 Gm5878-201ENSMUST00000113802 4643 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trub1Q8C0D0 Tial1-202ENSMUST00000106226 4451 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trub1Q8C0D0 Ccr6-202ENSMUST00000164411 1553 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trub1Q8C0D0 Elf5-206ENSMUST00000164172 2532 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trub1Q8C0D0 Scmh1-202ENSMUST00000064991 2548 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Trub1Q8C0D0 Prrx1-201ENSMUST00000027878 4952 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trub1Q8C0D0 Rpgrip1-202ENSMUST00000111603 5380 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trub1Q8C0D0 Mir291b-201ENSMUST00000104838 79 ntBASIC10.87□□□□□ -0.67
Trub1Q8C0D0 Styxl1-203ENSMUST00000111162 726 ntTSL 5 BASIC10.87□□□□□ -0.67
Trub1Q8C0D0 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trub1Q8C0D0 Gm13351-201ENSMUST00000118087 414 ntBASIC10.87□□□□□ -0.67
Trub1Q8C0D0 Gm14231-201ENSMUST00000120090 592 ntBASIC10.87□□□□□ -0.67
Trub1Q8C0D0 Spaca9-202ENSMUST00000124840 699 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trub1Q8C0D0 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trub1Q8C0D0 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC10.87□□□□□ -0.67
Trub1Q8C0D0 Gramd1b-212ENSMUST00000165104 3824 ntAPPRIS P2 TSL 5 BASIC10.87□□□□□ -0.67
Trub1Q8C0D0 Gm20822-201ENSMUST00000165756 687 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Trub1Q8C0D0 Gm20828-201ENSMUST00000170889 687 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Trub1Q8C0D0 Gm23647-201ENSMUST00000175042 109 ntBASIC10.87□□□□□ -0.67
Trub1Q8C0D0 Rn5s-201ENSMUST00000177555 119 ntBASIC10.87□□□□□ -0.67
Trub1Q8C0D0 n-R5s108-201ENSMUST00000177575 119 ntBASIC10.87□□□□□ -0.67
Trub1Q8C0D0 n-R5s121-201ENSMUST00000177589 119 ntBASIC10.87□□□□□ -0.67
Trub1Q8C0D0 n-R5s146-201ENSMUST00000177889 119 ntBASIC10.87□□□□□ -0.67
Trub1Q8C0D0 Gm22109-201ENSMUST00000177995 119 ntBASIC10.87□□□□□ -0.67
Trub1Q8C0D0 Gm22291-201ENSMUST00000178027 119 ntBASIC10.87□□□□□ -0.67
Trub1Q8C0D0 n-R5s141-201ENSMUST00000178066 119 ntBASIC10.87□□□□□ -0.67
Trub1Q8C0D0 Gm23284-201ENSMUST00000178069 119 ntBASIC10.87□□□□□ -0.67
Trub1Q8C0D0 n-R5s100-201ENSMUST00000178106 119 ntBASIC10.87□□□□□ -0.67
Trub1Q8C0D0 n-R5s111-201ENSMUST00000178203 119 ntBASIC10.87□□□□□ -0.67
Trub1Q8C0D0 n-R5s105-201ENSMUST00000178499 119 ntBASIC10.87□□□□□ -0.67
Trub1Q8C0D0 n-R5s149-201ENSMUST00000178520 119 ntBASIC10.87□□□□□ -0.67
Trub1Q8C0D0 n-R5s103-201ENSMUST00000178755 119 ntBASIC10.87□□□□□ -0.67
Trub1Q8C0D0 n-R5s123-201ENSMUST00000178804 119 ntBASIC10.87□□□□□ -0.67
Trub1Q8C0D0 n-R5s142-201ENSMUST00000178820 119 ntBASIC10.87□□□□□ -0.67
Trub1Q8C0D0 n-R5s144-201ENSMUST00000178859 119 ntBASIC10.87□□□□□ -0.67
Trub1Q8C0D0 n-R5s139-201ENSMUST00000178975 119 ntBASIC10.87□□□□□ -0.67
Trub1Q8C0D0 n-R5s134-201ENSMUST00000178983 119 ntBASIC10.87□□□□□ -0.67
Trub1Q8C0D0 n-R5s136-201ENSMUST00000179080 119 ntBASIC10.87□□□□□ -0.67
Trub1Q8C0D0 Gm25018-201ENSMUST00000179081 119 ntBASIC10.87□□□□□ -0.67
Trub1Q8C0D0 n-R5s104-201ENSMUST00000179107 119 ntBASIC10.87□□□□□ -0.67
Trub1Q8C0D0 n-R5s113-201ENSMUST00000179143 119 ntBASIC10.87□□□□□ -0.67
Trub1Q8C0D0 n-R5s133-201ENSMUST00000179275 119 ntBASIC10.87□□□□□ -0.67
Trub1Q8C0D0 n-R5s117-201ENSMUST00000179431 119 ntBASIC10.87□□□□□ -0.67
Trub1Q8C0D0 Gm25212-201ENSMUST00000179432 119 ntBASIC10.87□□□□□ -0.67
Trub1Q8C0D0 n-R5s138-201ENSMUST00000179476 119 ntBASIC10.87□□□□□ -0.67
Trub1Q8C0D0 n-R5s122-201ENSMUST00000179500 119 ntBASIC10.87□□□□□ -0.67
Trub1Q8C0D0 n-R5s143-201ENSMUST00000179542 119 ntBASIC10.87□□□□□ -0.67
Trub1Q8C0D0 n-R5s107-201ENSMUST00000179704 119 ntBASIC10.87□□□□□ -0.67
Trub1Q8C0D0 Gm26391-201ENSMUST00000179843 119 ntBASIC10.87□□□□□ -0.67
Trub1Q8C0D0 n-R5s110-201ENSMUST00000179995 119 ntBASIC10.87□□□□□ -0.67
Trub1Q8C0D0 n-R5s128-201ENSMUST00000180096 119 ntBASIC10.87□□□□□ -0.67
Trub1Q8C0D0 n-R5s124-201ENSMUST00000180334 119 ntBASIC10.87□□□□□ -0.67
Trub1Q8C0D0 1700084F23Rik-202ENSMUST00000188461 747 ntTSL 3 BASIC10.87□□□□□ -0.67
Trub1Q8C0D0 Nmbr-206ENSMUST00000190114 662 ntTSL 3 BASIC10.87□□□□□ -0.67
Trub1Q8C0D0 Gm7596-202ENSMUST00000202171 737 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trub1Q8C0D0 Gm43460-201ENSMUST00000202491 1057 ntBASIC10.87□□□□□ -0.67
Trub1Q8C0D0 Gm6423-201ENSMUST00000204315 934 ntBASIC10.87□□□□□ -0.67
Trub1Q8C0D0 Gm45120-201ENSMUST00000208880 408 ntBASIC10.87□□□□□ -0.67
Trub1Q8C0D0 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC10.87□□□□□ -0.67
Trub1Q8C0D0 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC10.87□□□□□ -0.67
Trub1Q8C0D0 BC106175-202ENSMUST00000219344 1213 ntBASIC10.87□□□□□ -0.67
Trub1Q8C0D0 Gm46224-201ENSMUST00000220221 1242 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trub1Q8C0D0 CAAA01139602.1-201ENSMUST00000222545 283 ntBASIC10.87□□□□□ -0.67
Trub1Q8C0D0 AC164883.7-201ENSMUST00000228534 851 ntBASIC10.87□□□□□ -0.67
Trub1Q8C0D0 Gm24089-201ENSMUST00000093696 109 ntBASIC10.87□□□□□ -0.67
Trub1Q8C0D0 Atf7-201ENSMUST00000096143 390 ntBASIC10.87□□□□□ -0.67
Trub1Q8C0D0 Rxfp2-202ENSMUST00000110496 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trub1Q8C0D0 Gm10463-202ENSMUST00000195772 2889 ntBASIC10.87□□□□□ -0.67
Trub1Q8C0D0 Gpi1-201ENSMUST00000038027 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trub1Q8C0D0 Siglec1-203ENSMUST00000110227 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trub1Q8C0D0 Tekt2-202ENSMUST00000102616 1542 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Trub1Q8C0D0 Gm43625-201ENSMUST00000199177 1539 ntBASIC10.87□□□□□ -0.67
Trub1Q8C0D0 Sun1-205ENSMUST00000110883 3714 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trub1Q8C0D0 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trub1Q8C0D0 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trub1Q8C0D0 Mdm1-203ENSMUST00000164077 2922 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trub1Q8C0D0 Cdca8-202ENSMUST00000084296 1626 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trub1Q8C0D0 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trub1Q8C0D0 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trub1Q8C0D0 Sppl2c-201ENSMUST00000059448 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trub1Q8C0D0 Pabpc4-201ENSMUST00000078734 2700 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trub1Q8C0D0 Gm20831-201ENSMUST00000177639 1337 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Trub1Q8C0D0 Gm20737-202ENSMUST00000187245 1338 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Trub1Q8C0D0 Gm20777-202ENSMUST00000187434 1341 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Trub1Q8C0D0 Gm20873-202ENSMUST00000187857 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trub1Q8C0D0 Gm20772-201ENSMUST00000188928 1343 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Trub1Q8C0D0 Gm21310-202ENSMUST00000189630 1343 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trub1Q8C0D0 Gm20795-202ENSMUST00000190909 1344 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trub1Q8C0D0 Gm21440-201ENSMUST00000192749 1344 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms