Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Btg4-202ENSMUST00000213117 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nup98Q6PFD9 Gm18670-201ENSMUST00000218712 696 ntBASIC12.25□□□□□ -0.45
Nup98Q6PFD9 Tnnt3-202ENSMUST00000078497 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nup98Q6PFD9 Gm10581-201ENSMUST00000097986 231 ntBASIC12.25□□□□□ -0.45
Nup98Q6PFD9 Uros-204ENSMUST00000106146 1483 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Nup98Q6PFD9 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Nup98Q6PFD9 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nup98Q6PFD9 Eddm3b-201ENSMUST00000100645 1412 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nup98Q6PFD9 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC12.25□□□□□ -0.45
Nup98Q6PFD9 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Nup98Q6PFD9 Mobp-202ENSMUST00000093773 3286 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nup98Q6PFD9 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Nup98Q6PFD9 AC154528.2-201ENSMUST00000228432 3023 ntBASIC12.25□□□□□ -0.45
Nup98Q6PFD9 Gpr160-201ENSMUST00000046748 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nup98Q6PFD9 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Nup98Q6PFD9 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC12.25□□□□□ -0.45
Nup98Q6PFD9 Gm16702-201ENSMUST00000181180 2384 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Nup98Q6PFD9 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nup98Q6PFD9 BC051665-201ENSMUST00000026078 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nup98Q6PFD9 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nup98Q6PFD9 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nup98Q6PFD9 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nup98Q6PFD9 C2cd5-201ENSMUST00000087485 4265 ntTSL 5 BASIC12.25□□□□□ -0.45
Nup98Q6PFD9 Rab7b-201ENSMUST00000064664 1672 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Nup98Q6PFD9 Gm14834-201ENSMUST00000119416 795 ntBASIC12.25□□□□□ -0.45
Nup98Q6PFD9 1700057H15Rik-202ENSMUST00000143859 704 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Nup98Q6PFD9 Atp5h-208ENSMUST00000180072 486 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Nup98Q6PFD9 Gm34780-201ENSMUST00000193896 949 ntBASIC12.25□□□□□ -0.45
Nup98Q6PFD9 AC166902.2-202ENSMUST00000213191 1038 ntTSL 5 BASIC12.25□□□□□ -0.45
Nup98Q6PFD9 Gm18391-201ENSMUST00000217189 658 ntBASIC12.25□□□□□ -0.45
Nup98Q6PFD9 CT025547.1-201ENSMUST00000225127 578 ntBASIC12.25□□□□□ -0.45
Nup98Q6PFD9 AC159006.3-201ENSMUST00000226918 664 ntBASIC12.25□□□□□ -0.45
Nup98Q6PFD9 Tctex1d1-201ENSMUST00000030248 977 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nup98Q6PFD9 Opn1mw-201ENSMUST00000033771 1227 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nup98Q6PFD9 Gm10250-201ENSMUST00000090488 482 ntBASIC12.25□□□□□ -0.45
Nup98Q6PFD9 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Nup98Q6PFD9 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Nup98Q6PFD9 Ufsp2-201ENSMUST00000034051 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nup98Q6PFD9 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nup98Q6PFD9 Gm15383-201ENSMUST00000121889 1443 ntBASIC12.25□□□□□ -0.45
Nup98Q6PFD9 Gm44547-201ENSMUST00000207793 1446 ntBASIC12.25□□□□□ -0.45
Nup98Q6PFD9 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nup98Q6PFD9 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nup98Q6PFD9 Ttll9-201ENSMUST00000099197 1797 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nup98Q6PFD9 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC12.24□□□□□ -0.45
Nup98Q6PFD9 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nup98Q6PFD9 Syncrip-208ENSMUST00000174282 3404 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nup98Q6PFD9 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Nup98Q6PFD9 Rtn4ip1-202ENSMUST00000105492 2059 ntTSL 3 BASIC12.24□□□□□ -0.45
Nup98Q6PFD9 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nup98Q6PFD9 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nup98Q6PFD9 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nup98Q6PFD9 Gm14538-201ENSMUST00000122019 1327 ntBASIC12.24□□□□□ -0.45
Nup98Q6PFD9 Gm37484-201ENSMUST00000195378 2523 ntBASIC12.24□□□□□ -0.45
Nup98Q6PFD9 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Nup98Q6PFD9 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nup98Q6PFD9 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC12.24□□□□□ -0.45
Nup98Q6PFD9 Gm7781-201ENSMUST00000117258 788 ntBASIC12.24□□□□□ -0.45
Nup98Q6PFD9 Gm16131-201ENSMUST00000131007 659 ntTSL 3 BASIC12.24□□□□□ -0.45
Nup98Q6PFD9 Gm13580-201ENSMUST00000131457 566 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Nup98Q6PFD9 Gm12977-201ENSMUST00000133742 942 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Nup98Q6PFD9 Gm13861-201ENSMUST00000137136 495 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Nup98Q6PFD9 Gm3617-201ENSMUST00000173076 555 ntBASIC12.24□□□□□ -0.45
Nup98Q6PFD9 AC121357.1-201ENSMUST00000227365 608 ntBASIC12.24□□□□□ -0.45
Nup98Q6PFD9 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nup98Q6PFD9 Sh2d6-201ENSMUST00000089687 1162 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Nup98Q6PFD9 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nup98Q6PFD9 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nup98Q6PFD9 Nr2c1-201ENSMUST00000092213 2376 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Nup98Q6PFD9 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nup98Q6PFD9 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC12.24□□□□□ -0.45
Nup98Q6PFD9 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nup98Q6PFD9 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Nup98Q6PFD9 Sf3a3-201ENSMUST00000030734 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nup98Q6PFD9 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Nup98Q6PFD9 Hsf2-204ENSMUST00000220042 2430 ntTSL 5 BASIC12.24□□□□□ -0.45
Nup98Q6PFD9 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nup98Q6PFD9 Gm15894-201ENSMUST00000162828 2067 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Nup98Q6PFD9 Mpp4-203ENSMUST00000114275 2982 ntAPPRIS P4 TSL 2 BASIC12.23□□□□□ -0.45
Nup98Q6PFD9 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Nup98Q6PFD9 Gm13215-201ENSMUST00000117559 472 ntBASIC12.23□□□□□ -0.45
Nup98Q6PFD9 Gm14571-201ENSMUST00000118292 570 ntBASIC12.23□□□□□ -0.45
Nup98Q6PFD9 Piga-204ENSMUST00000133813 1086 ntTSL 5 BASIC12.23□□□□□ -0.45
Nup98Q6PFD9 Gm17120-201ENSMUST00000164734 743 ntTSL 3 BASIC12.23□□□□□ -0.45
Nup98Q6PFD9 Gm17250-201ENSMUST00000180494 1010 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Nup98Q6PFD9 Mylpf-206ENSMUST00000206772 653 ntTSL 3 BASIC12.23□□□□□ -0.45
Nup98Q6PFD9 4933430L12Rik-201ENSMUST00000206788 1194 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Nup98Q6PFD9 AC119177.2-201ENSMUST00000226699 629 ntBASIC12.23□□□□□ -0.45
Nup98Q6PFD9 AC137950.2-201ENSMUST00000227127 1089 ntBASIC12.23□□□□□ -0.45
Nup98Q6PFD9 Dbil5-201ENSMUST00000040806 581 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nup98Q6PFD9 Cd1d2-201ENSMUST00000041920 1243 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Nup98Q6PFD9 1700063H04Rik-201ENSMUST00000043553 817 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Nup98Q6PFD9 Gm10643-201ENSMUST00000098592 1577 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Nup98Q6PFD9 Lnpk-201ENSMUST00000064503 3195 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nup98Q6PFD9 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Nup98Q6PFD9 Tbpl1-202ENSMUST00000127698 2873 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nup98Q6PFD9 Tuft1-204ENSMUST00000196733 2555 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nup98Q6PFD9 Zfp352-202ENSMUST00000107129 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nup98Q6PFD9 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nup98Q6PFD9 Mapk1ip1-202ENSMUST00000118810 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 95.9 ms