Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Gm16240-201ENSMUST00000161924 614 ntTSL 2 BASIC12.35□□□□□ -0.43
Rc3h1Q4VGL6 Fbxo16-201ENSMUST00000169656 1019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rc3h1Q4VGL6 Tcl1-203ENSMUST00000175652 535 ntTSL 2 BASIC12.35□□□□□ -0.43
Rc3h1Q4VGL6 Gm6686-201ENSMUST00000178455 258 ntBASIC12.35□□□□□ -0.43
Rc3h1Q4VGL6 Gm8210-201ENSMUST00000178557 483 ntBASIC12.35□□□□□ -0.43
Rc3h1Q4VGL6 Gm15454-201ENSMUST00000179718 483 ntBASIC12.35□□□□□ -0.43
Rc3h1Q4VGL6 Gm26693-201ENSMUST00000181318 1021 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rc3h1Q4VGL6 Gm7985-201ENSMUST00000183329 981 ntBASIC12.35□□□□□ -0.43
Rc3h1Q4VGL6 1700001J11Rik-201ENSMUST00000185917 759 ntBASIC12.35□□□□□ -0.43
Rc3h1Q4VGL6 Mrgprb7-ps-201ENSMUST00000190238 964 ntBASIC12.35□□□□□ -0.43
Rc3h1Q4VGL6 Gm29011-201ENSMUST00000191059 712 ntBASIC12.35□□□□□ -0.43
Rc3h1Q4VGL6 Ackr1-202ENSMUST00000194046 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rc3h1Q4VGL6 Gm37362-201ENSMUST00000194567 634 ntTSL 5 BASIC12.35□□□□□ -0.43
Rc3h1Q4VGL6 Pcdh7-207ENSMUST00000199310 659 ntTSL 2 BASIC12.35□□□□□ -0.43
Rc3h1Q4VGL6 Gm18123-201ENSMUST00000210874 822 ntBASIC12.35□□□□□ -0.43
Rc3h1Q4VGL6 Tmem238l-203ENSMUST00000211300 930 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
Rc3h1Q4VGL6 Gm32786-201ENSMUST00000211351 628 ntTSL 3 BASIC12.35□□□□□ -0.43
Rc3h1Q4VGL6 Gm18122-201ENSMUST00000211390 904 ntBASIC12.35□□□□□ -0.43
Rc3h1Q4VGL6 AC173345.3-201ENSMUST00000221245 1093 ntBASIC12.35□□□□□ -0.43
Rc3h1Q4VGL6 AC154848.1-201ENSMUST00000225451 846 ntBASIC12.35□□□□□ -0.43
Rc3h1Q4VGL6 Psca-201ENSMUST00000023265 860 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rc3h1Q4VGL6 Ptma-201ENSMUST00000045897 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rc3h1Q4VGL6 Gm6344-201ENSMUST00000075962 483 ntBASIC12.35□□□□□ -0.43
Rc3h1Q4VGL6 Gm4763-201ENSMUST00000081657 882 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rc3h1Q4VGL6 Ttpal-207ENSMUST00000171696 4522 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rc3h1Q4VGL6 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rc3h1Q4VGL6 Sptbn5-204ENSMUST00000156159 3625 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Rc3h1Q4VGL6 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rc3h1Q4VGL6 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC12.35□□□□□ -0.43
Rc3h1Q4VGL6 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rc3h1Q4VGL6 Gm5532-201ENSMUST00000097531 1751 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rc3h1Q4VGL6 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rc3h1Q4VGL6 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rc3h1Q4VGL6 Cycs-202ENSMUST00000161401 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rc3h1Q4VGL6 Gm15651-201ENSMUST00000159953 2507 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rc3h1Q4VGL6 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rc3h1Q4VGL6 Gm17836-201ENSMUST00000191976 1302 ntBASIC12.35□□□□□ -0.43
Rc3h1Q4VGL6 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rc3h1Q4VGL6 Mobp-202ENSMUST00000093773 3286 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rc3h1Q4VGL6 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Rc3h1Q4VGL6 Mettl8-201ENSMUST00000090849 1842 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rc3h1Q4VGL6 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rc3h1Q4VGL6 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rc3h1Q4VGL6 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rc3h1Q4VGL6 Morf4l2-213ENSMUST00000166478 1720 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Rc3h1Q4VGL6 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rc3h1Q4VGL6 Vmn1r38-201ENSMUST00000226457 3462 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Rc3h1Q4VGL6 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rc3h1Q4VGL6 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rc3h1Q4VGL6 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rc3h1Q4VGL6 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rc3h1Q4VGL6 Ap5s1-203ENSMUST00000110208 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rc3h1Q4VGL6 Sh3gl2-202ENSMUST00000107184 671 ntTSL 2 BASIC12.34□□□□□ -0.43
Rc3h1Q4VGL6 Pex5l-203ENSMUST00000108221 1187 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rc3h1Q4VGL6 Gm5395-201ENSMUST00000121650 915 ntBASIC12.34□□□□□ -0.43
Rc3h1Q4VGL6 Gm14718-201ENSMUST00000138082 752 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rc3h1Q4VGL6 Gm28041-201ENSMUST00000166080 779 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rc3h1Q4VGL6 Znrd1-202ENSMUST00000172518 710 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rc3h1Q4VGL6 Map1lc3b-205ENSMUST00000181948 766 ntTSL 2 BASIC12.34□□□□□ -0.43
Rc3h1Q4VGL6 9530085P06Rik-201ENSMUST00000182121 827 ntBASIC12.34□□□□□ -0.43
Rc3h1Q4VGL6 Arl14-201ENSMUST00000183126 1200 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Rc3h1Q4VGL6 Gm27833-201ENSMUST00000184285 124 ntBASIC12.34□□□□□ -0.43
Rc3h1Q4VGL6 Gm37207-201ENSMUST00000194284 296 ntBASIC12.34□□□□□ -0.43
Rc3h1Q4VGL6 Gm38321-201ENSMUST00000195053 235 ntBASIC12.34□□□□□ -0.43
Rc3h1Q4VGL6 Gm42516-201ENSMUST00000198691 767 ntBASIC12.34□□□□□ -0.43
Rc3h1Q4VGL6 Ghrl-203ENSMUST00000203588 237 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rc3h1Q4VGL6 Gm45276-201ENSMUST00000209549 1086 ntBASIC12.34□□□□□ -0.43
Rc3h1Q4VGL6 Gm7439-201ENSMUST00000214053 835 ntBASIC12.34□□□□□ -0.43
Rc3h1Q4VGL6 Gm14005-208ENSMUST00000223654 681 ntBASIC12.34□□□□□ -0.43
Rc3h1Q4VGL6 AC157650.1-201ENSMUST00000224582 610 ntBASIC12.34□□□□□ -0.43
Rc3h1Q4VGL6 Defb29-201ENSMUST00000060598 462 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rc3h1Q4VGL6 2010001K21Rik-201ENSMUST00000060680 519 ntBASIC12.34□□□□□ -0.43
Rc3h1Q4VGL6 Spink2-201ENSMUST00000065216 631 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rc3h1Q4VGL6 Mir326-201ENSMUST00000083637 95 ntBASIC12.34□□□□□ -0.43
Rc3h1Q4VGL6 Olfr1156-202ENSMUST00000216191 3300 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Rc3h1Q4VGL6 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rc3h1Q4VGL6 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Rc3h1Q4VGL6 A930003O13Rik-202ENSMUST00000197486 3098 ntBASIC12.34□□□□□ -0.43
Rc3h1Q4VGL6 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rc3h1Q4VGL6 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rc3h1Q4VGL6 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rc3h1Q4VGL6 Habp2-201ENSMUST00000078284 2314 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Rc3h1Q4VGL6 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Rc3h1Q4VGL6 Gm7642-201ENSMUST00000216345 1809 ntBASIC12.34□□□□□ -0.43
Rc3h1Q4VGL6 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rc3h1Q4VGL6 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Rc3h1Q4VGL6 Aadac-201ENSMUST00000029325 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rc3h1Q4VGL6 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC12.34□□□□□ -0.43
Rc3h1Q4VGL6 Gm44415-201ENSMUST00000204151 2112 ntBASIC12.34□□□□□ -0.43
Rc3h1Q4VGL6 Tmem154-201ENSMUST00000107682 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rc3h1Q4VGL6 Pcdhb9-201ENSMUST00000057228 3055 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Rc3h1Q4VGL6 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Rc3h1Q4VGL6 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Rc3h1Q4VGL6 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Rc3h1Q4VGL6 Optc-205ENSMUST00000153617 1615 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Rc3h1Q4VGL6 Skp2-201ENSMUST00000096482 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rc3h1Q4VGL6 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rc3h1Q4VGL6 Mir9-3hg-202ENSMUST00000181511 3412 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rc3h1Q4VGL6 H2-M10.1-201ENSMUST00000025322 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rc3h1Q4VGL6 Gm42971-201ENSMUST00000199228 2079 ntBASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms