Protein–RNA interactions for Protein: Q00422

Gabpa, GA-binding protein alpha chain, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GabpaQ00422 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
GabpaQ00422 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
GabpaQ00422 Gm6713-201ENSMUST00000216137 1446 ntBASIC12□□□□□ -0.49
GabpaQ00422 Atp5s-201ENSMUST00000021372 1485 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
GabpaQ00422 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
GabpaQ00422 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
GabpaQ00422 Gm38271-201ENSMUST00000192296 1603 ntBASIC12□□□□□ -0.49
GabpaQ00422 Exosc9-201ENSMUST00000029269 1617 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
GabpaQ00422 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
GabpaQ00422 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
GabpaQ00422 Chp1-202ENSMUST00000119172 3027 ntTSL 2 BASIC12□□□□□ -0.49
GabpaQ00422 Myc-206ENSMUST00000167731 1821 ntTSL 1 (best) BASIC12□□□□□ -0.49
GabpaQ00422 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
GabpaQ00422 1700048O20Rik-202ENSMUST00000214777 1900 ntTSL 3 BASIC11.99□□□□□ -0.49
GabpaQ00422 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
GabpaQ00422 Zmat1-201ENSMUST00000064659 3501 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
GabpaQ00422 Elmod3-202ENSMUST00000114069 2164 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
GabpaQ00422 Mical2-202ENSMUST00000050149 6669 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
GabpaQ00422 Gm42449-201ENSMUST00000200349 2258 ntBASIC11.99□□□□□ -0.49
GabpaQ00422 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
GabpaQ00422 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
GabpaQ00422 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC11.99□□□□□ -0.49
GabpaQ00422 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
GabpaQ00422 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
GabpaQ00422 Cd300ld5-201ENSMUST00000100239 852 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
GabpaQ00422 Cd300ld4-201ENSMUST00000100240 852 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
GabpaQ00422 Gm15793-201ENSMUST00000121857 495 ntBASIC11.99□□□□□ -0.49
GabpaQ00422 Gm45591-201ENSMUST00000129058 843 ntTSL 3 BASIC11.99□□□□□ -0.49
GabpaQ00422 Hoxd3os1-203ENSMUST00000145799 511 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
GabpaQ00422 Ubl5-203ENSMUST00000160124 501 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
GabpaQ00422 Mok-204ENSMUST00000177224 551 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
GabpaQ00422 Gm19798-201ENSMUST00000201502 457 ntBASIC11.99□□□□□ -0.49
GabpaQ00422 Gm5148-201ENSMUST00000079755 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
GabpaQ00422 Cd300ld3-201ENSMUST00000092459 852 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
GabpaQ00422 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
GabpaQ00422 Dync2li1-201ENSMUST00000025101 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
GabpaQ00422 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
GabpaQ00422 Gm44975-201ENSMUST00000207435 1390 ntBASIC11.99□□□□□ -0.49
GabpaQ00422 Gm13608-201ENSMUST00000121807 1406 ntBASIC11.99□□□□□ -0.49
GabpaQ00422 Nos1ap-203ENSMUST00000160466 1533 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
GabpaQ00422 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
GabpaQ00422 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
GabpaQ00422 Olfr707-204ENSMUST00000213251 1777 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
GabpaQ00422 Ttc39a-202ENSMUST00000106618 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
GabpaQ00422 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
GabpaQ00422 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
GabpaQ00422 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
GabpaQ00422 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
GabpaQ00422 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
GabpaQ00422 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
GabpaQ00422 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
GabpaQ00422 Piezo2-202ENSMUST00000047480 10724 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
GabpaQ00422 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
GabpaQ00422 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
GabpaQ00422 Tfap2b-204ENSMUST00000187754 3023 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
GabpaQ00422 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
GabpaQ00422 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
GabpaQ00422 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
GabpaQ00422 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
GabpaQ00422 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
GabpaQ00422 CN725425-201ENSMUST00000109284 1929 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
GabpaQ00422 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
GabpaQ00422 Bzw2-201ENSMUST00000020856 1871 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
GabpaQ00422 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC11.98□□□□□ -0.49
GabpaQ00422 C130026L21Rik-204ENSMUST00000199587 1838 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
GabpaQ00422 B230312C02Rik-201ENSMUST00000145549 1703 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
GabpaQ00422 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
GabpaQ00422 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
GabpaQ00422 Ccdc42-202ENSMUST00000102612 785 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
GabpaQ00422 Spaca9-201ENSMUST00000102877 671 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
GabpaQ00422 Gm8216-201ENSMUST00000117232 601 ntBASIC11.98□□□□□ -0.49
GabpaQ00422 Pex13-ps-201ENSMUST00000118184 1157 ntBASIC11.98□□□□□ -0.49
GabpaQ00422 Gm14639-201ENSMUST00000120850 866 ntBASIC11.98□□□□□ -0.49
GabpaQ00422 Muc2-202ENSMUST00000167366 711 ntTSL 5 BASIC11.98□□□□□ -0.49
GabpaQ00422 Gm22994-201ENSMUST00000175422 82 ntBASIC11.98□□□□□ -0.49
GabpaQ00422 Gm9409-201ENSMUST00000197017 316 ntBASIC11.98□□□□□ -0.49
GabpaQ00422 AC124613.1-201ENSMUST00000198711 88 ntBASIC11.98□□□□□ -0.49
GabpaQ00422 Mt1-203ENSMUST00000212291 633 ntTSL 2 BASIC11.98□□□□□ -0.49
GabpaQ00422 AC132384.2-201ENSMUST00000218018 526 ntBASIC11.98□□□□□ -0.49
GabpaQ00422 CAAA01139602.1-201ENSMUST00000222545 283 ntBASIC11.98□□□□□ -0.49
GabpaQ00422 AC165092.1-201ENSMUST00000224018 486 ntBASIC11.98□□□□□ -0.49
GabpaQ00422 Gm8615-201ENSMUST00000025307 771 ntBASIC11.98□□□□□ -0.49
GabpaQ00422 Tsga8-201ENSMUST00000049420 1070 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
GabpaQ00422 Olfr1394-201ENSMUST00000052668 939 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
GabpaQ00422 Tceanc2-203ENSMUST00000058585 766 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
GabpaQ00422 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
GabpaQ00422 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
GabpaQ00422 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
GabpaQ00422 Atad5-202ENSMUST00000108239 7266 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
GabpaQ00422 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
GabpaQ00422 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
GabpaQ00422 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
GabpaQ00422 Dyrk4-202ENSMUST00000078521 2252 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
GabpaQ00422 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
GabpaQ00422 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
GabpaQ00422 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
GabpaQ00422 Gm42587-201ENSMUST00000198462 1981 ntBASIC11.98□□□□□ -0.49
GabpaQ00422 Gm37849-201ENSMUST00000194722 1881 ntBASIC11.97□□□□□ -0.49
GabpaQ00422 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
GabpaQ00422 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms