Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Odf2-205ENSMUST00000113757 3082 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
Npas1P97459 Osbpl1a-204ENSMUST00000119043 2522 ntTSL 1 (best) BASIC8.83□□□□□ -1
Npas1P97459 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
Npas1P97459 Zadh2-201ENSMUST00000060223 3321 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Npas1P97459 Tusc5-201ENSMUST00000062024 3302 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Npas1P97459 Lct-201ENSMUST00000073490 6174 ntAPPRIS P1 TSL 2 BASIC8.83□□□□□ -1
Npas1P97459 Firre-206ENSMUST00000203933 5555 ntTSL 1 (best) BASIC8.83□□□□□ -1
Npas1P97459 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Npas1P97459 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC8.83□□□□□ -1
Npas1P97459 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Npas1P97459 Gm11244-201ENSMUST00000121243 237 ntBASIC8.83□□□□□ -1
Npas1P97459 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC8.83□□□□□ -1
Npas1P97459 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Npas1P97459 Gm25492-201ENSMUST00000157383 129 ntBASIC8.83□□□□□ -1
Npas1P97459 Ighv1-48-201ENSMUST00000191795 294 ntBASIC8.83□□□□□ -1
Npas1P97459 Gm8574-201ENSMUST00000203207 924 ntBASIC8.83□□□□□ -1
Npas1P97459 Gm43916-201ENSMUST00000205062 967 ntBASIC8.83□□□□□ -1
Npas1P97459 Gm34868-201ENSMUST00000218341 530 ntTSL 3 BASIC8.83□□□□□ -1
Npas1P97459 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Npas1P97459 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC8.83□□□□□ -1
Npas1P97459 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC8.83□□□□□ -1
Npas1P97459 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC8.83□□□□□ -1
Npas1P97459 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC8.83□□□□□ -1
Npas1P97459 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC8.83□□□□□ -1
Npas1P97459 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Npas1P97459 Phf20-ps-201ENSMUST00000185066 2886 ntBASIC8.83□□□□□ -1
Npas1P97459 Pax6-207ENSMUST00000111087 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC8.83□□□□□ -1
Npas1P97459 9130019O22Rik-201ENSMUST00000049052 3878 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Npas1P97459 C86187-202ENSMUST00000209497 2415 ntTSL 1 (best) BASIC8.83□□□□□ -1
Npas1P97459 Gm6903-201ENSMUST00000160509 1366 ntBASIC8.83□□□□□ -1
Npas1P97459 Prox2-201ENSMUST00000110249 2682 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Npas1P97459 Rimbp2-207ENSMUST00000200470 4083 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Npas1P97459 Rgs8-202ENSMUST00000111810 5614 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Npas1P97459 Ank3-242ENSMUST00000183261 4999 ntTSL 5 BASIC8.83□□□□□ -1
Npas1P97459 Stk36-201ENSMUST00000087183 5245 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
Npas1P97459 Pcdhga7-202ENSMUST00000193476 3044 ntAPPRIS ALT2 BASIC8.83□□□□□ -1
Npas1P97459 Hapln3-203ENSMUST00000206092 3358 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Npas1P97459 1700001J11Rik-202ENSMUST00000190330 2463 ntBASIC8.82□□□□□ -1
Npas1P97459 Cass4-203ENSMUST00000109136 2702 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
Npas1P97459 Ptbp3-201ENSMUST00000030076 6855 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Npas1P97459 Dock7-201ENSMUST00000030286 7127 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
Npas1P97459 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
Npas1P97459 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Npas1P97459 Spns3-201ENSMUST00000021154 1804 ntTSL 1 (best) BASIC8.82□□□□□ -1
Npas1P97459 Zfp469-202ENSMUST00000187142 3082 ntBASIC8.82□□□□□ -1
Npas1P97459 Zzef1-207ENSMUST00000172220 11249 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
Npas1P97459 Ccdc136-201ENSMUST00000096084 3826 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
Npas1P97459 Mir9-3hg-202ENSMUST00000181511 3412 ntTSL 1 (best) BASIC8.82□□□□□ -1
Npas1P97459 Gm42868-201ENSMUST00000199168 2697 ntBASIC8.82□□□□□ -1
Npas1P97459 Gpr39-201ENSMUST00000027581 2691 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Npas1P97459 Plec-217ENSMUST00000169438 14827 ntTSL 1 (best) BASIC8.82□□□□□ -1
Npas1P97459 Tmem181b-ps-201ENSMUST00000167717 1413 ntBASIC8.82□□□□□ -1
Npas1P97459 Mfsd11-201ENSMUST00000021173 3298 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Npas1P97459 Kcnk2-201ENSMUST00000079451 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC8.82□□□□□ -1
Npas1P97459 Apba2-206ENSMUST00000206246 3027 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
Npas1P97459 Pcdha4-201ENSMUST00000192295 4129 ntTSL 1 (best) BASIC8.82□□□□□ -1
Npas1P97459 Usp28-203ENSMUST00000213874 4109 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Npas1P97459 Krt222-201ENSMUST00000038214 2042 ntTSL 1 (best) BASIC8.82□□□□□ -1
Npas1P97459 AC166836.1-201ENSMUST00000219933 1795 ntBASIC8.82□□□□□ -1
Npas1P97459 Rbbp6-201ENSMUST00000052135 6184 ntAPPRIS P2 TSL 5 BASIC8.82□□□□□ -1
Npas1P97459 Mc3r-201ENSMUST00000038532 2623 ntAPPRIS P1 BASIC8.82□□□□□ -1
Npas1P97459 Ralgps1-201ENSMUST00000042615 6029 ntTSL 1 (best) BASIC8.82□□□□□ -1
Npas1P97459 Clock-201ENSMUST00000075159 7478 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
Npas1P97459 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Npas1P97459 1700071K01Rik-201ENSMUST00000117522 819 ntBASIC8.82□□□□□ -1
Npas1P97459 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC8.82□□□□□ -1
Npas1P97459 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC8.82□□□□□ -1
Npas1P97459 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Npas1P97459 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC8.82□□□□□ -1
Npas1P97459 Gm9639-201ENSMUST00000172205 678 ntAPPRIS P1 BASIC8.82□□□□□ -1
Npas1P97459 Gm28032-201ENSMUST00000184104 96 ntBASIC8.82□□□□□ -1
Npas1P97459 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC8.82□□□□□ -1
Npas1P97459 Gm9111-201ENSMUST00000219394 709 ntBASIC8.82□□□□□ -1
Npas1P97459 Gm12216-207ENSMUST00000220191 1073 ntAPPRIS P5 TSL 5 BASIC8.82□□□□□ -1
Npas1P97459 CT009546.1-201ENSMUST00000222573 1120 ntBASIC8.82□□□□□ -1
Npas1P97459 AC125350.2-201ENSMUST00000224737 727 ntBASIC8.82□□□□□ -1
Npas1P97459 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Npas1P97459 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC8.82□□□□□ -1
Npas1P97459 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Npas1P97459 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC8.82□□□□□ -1
Npas1P97459 Olfr584-201ENSMUST00000098210 964 ntBASIC8.82□□□□□ -1
Npas1P97459 Bfar-202ENSMUST00000069281 2456 ntTSL 1 (best) BASIC8.82□□□□□ -1
Npas1P97459 Ncam1-202ENSMUST00000166811 3088 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Npas1P97459 Cacna1c-209ENSMUST00000187386 6906 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
Npas1P97459 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC8.82□□□□□ -1
Npas1P97459 Trmt13-201ENSMUST00000041524 3402 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Npas1P97459 Csf3r-201ENSMUST00000030673 3160 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Npas1P97459 Ilf3-203ENSMUST00000213518 3513 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Npas1P97459 Cdh16-201ENSMUST00000163783 2910 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Npas1P97459 Rnf216-201ENSMUST00000053498 4474 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Npas1P97459 Hacl1-214ENSMUST00000167175 1739 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Npas1P97459 Far1-211ENSMUST00000164745 3972 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Npas1P97459 Cspg4-201ENSMUST00000035661 8121 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Npas1P97459 Flg2-201ENSMUST00000098884 7011 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Npas1P97459 Gm26912-201ENSMUST00000180988 1483 ntTSL 1 (best) BASIC8.82□□□□□ -1
Npas1P97459 Art4-201ENSMUST00000032341 2517 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Npas1P97459 Pigq-202ENSMUST00000097368 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Npas1P97459 Ppp4r1-204ENSMUST00000160664 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Npas1P97459 Rassf2-202ENSMUST00000103182 4589 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
Npas1P97459 Gm31983-202ENSMUST00000210553 3155 ntTSL 5 BASIC8.81□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms