Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Armc2-201ENSMUST00000095729 4855 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
H3f3aP84244 Skp2-201ENSMUST00000096482 3118 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
H3f3aP84244 Gal3st4-201ENSMUST00000100530 3162 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
H3f3aP84244 Mir291b-201ENSMUST00000104838 79 ntBASIC9.44□□□□□ -0.9
H3f3aP84244 Ccdc32-203ENSMUST00000110834 828 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
H3f3aP84244 Gm14993-201ENSMUST00000121180 164 ntBASIC9.44□□□□□ -0.9
H3f3aP84244 Gm12628-201ENSMUST00000122193 382 ntBASIC9.44□□□□□ -0.9
H3f3aP84244 Aamdc-206ENSMUST00000136757 789 ntAPPRIS P1 TSL 2 BASIC9.44□□□□□ -0.9
H3f3aP84244 Gm16547-201ENSMUST00000159474 293 ntBASIC9.44□□□□□ -0.9
H3f3aP84244 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
H3f3aP84244 Gm24328-201ENSMUST00000175104 67 ntBASIC9.44□□□□□ -0.9
H3f3aP84244 Gm29346-201ENSMUST00000188147 255 ntTSL 3 BASIC9.44□□□□□ -0.9
H3f3aP84244 Gm5543-201ENSMUST00000193329 1091 ntBASIC9.44□□□□□ -0.9
H3f3aP84244 Gm37723-201ENSMUST00000194480 565 ntBASIC9.44□□□□□ -0.9
H3f3aP84244 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
H3f3aP84244 Gm3433-201ENSMUST00000210149 1058 ntBASIC9.44□□□□□ -0.9
H3f3aP84244 AC154407.1-201ENSMUST00000226777 526 ntBASIC9.44□□□□□ -0.9
H3f3aP84244 AC154806.7-201ENSMUST00000227998 202 ntBASIC9.44□□□□□ -0.9
H3f3aP84244 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
H3f3aP84244 2010001K21Rik-201ENSMUST00000060680 519 ntBASIC9.44□□□□□ -0.9
H3f3aP84244 Atf7-201ENSMUST00000096143 390 ntBASIC9.44□□□□□ -0.9
H3f3aP84244 9430015G10Rik-202ENSMUST00000105576 1329 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
H3f3aP84244 Prdm1-202ENSMUST00000105490 4025 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
H3f3aP84244 Sgca-205ENSMUST00000166320 1428 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
H3f3aP84244 Atad5-201ENSMUST00000017694 7272 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
H3f3aP84244 Nos1ap-203ENSMUST00000160466 1533 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
H3f3aP84244 Ahrr-201ENSMUST00000022059 4754 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
H3f3aP84244 Nrg1-212ENSMUST00000208598 1778 ntTSL 5 BASIC9.44□□□□□ -0.9
H3f3aP84244 Gm37516-201ENSMUST00000192593 1954 ntBASIC9.44□□□□□ -0.9
H3f3aP84244 Gm42587-201ENSMUST00000198462 1981 ntBASIC9.44□□□□□ -0.9
H3f3aP84244 Gm37242-201ENSMUST00000191873 2085 ntBASIC9.44□□□□□ -0.9
H3f3aP84244 Tnfrsf9-205ENSMUST00000116257 2115 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
H3f3aP84244 Cacna1e-207ENSMUST00000211821 6765 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
H3f3aP84244 Cryz-201ENSMUST00000029850 2507 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
H3f3aP84244 Smok3a-201ENSMUST00000085886 2723 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
H3f3aP84244 Cage1-203ENSMUST00000110233 2875 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
H3f3aP84244 Gm43999-201ENSMUST00000204286 2889 ntBASIC9.44□□□□□ -0.9
H3f3aP84244 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
H3f3aP84244 Gtf3c2-201ENSMUST00000088010 4552 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
H3f3aP84244 Mllt3-201ENSMUST00000078090 6069 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
H3f3aP84244 Il17rd-201ENSMUST00000035336 8280 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
H3f3aP84244 Uaca-202ENSMUST00000214354 4417 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
H3f3aP84244 Dzip1l-203ENSMUST00000112885 4350 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
H3f3aP84244 Fam234b-201ENSMUST00000111915 4221 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
H3f3aP84244 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
H3f3aP84244 Ikbkb-201ENSMUST00000033939 3580 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
H3f3aP84244 Stk38-201ENSMUST00000009138 3288 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
H3f3aP84244 Tldc1-201ENSMUST00000049156 3085 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
H3f3aP84244 Arhgap4-202ENSMUST00000114404 2895 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
H3f3aP84244 Sla2-202ENSMUST00000109561 2634 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
H3f3aP84244 Gm35021-201ENSMUST00000210105 2329 ntTSL 5 BASIC9.43□□□□□ -0.9
H3f3aP84244 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
H3f3aP84244 Trak2-201ENSMUST00000027186 6189 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
H3f3aP84244 Gm6092-201ENSMUST00000121659 2029 ntBASIC9.43□□□□□ -0.9
H3f3aP84244 A830018L16Rik-209ENSMUST00000179089 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
H3f3aP84244 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
H3f3aP84244 Fcrl1-202ENSMUST00000163661 1649 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
H3f3aP84244 Creb3l4-201ENSMUST00000029547 1553 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
H3f3aP84244 Nmt2-201ENSMUST00000081932 4461 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
H3f3aP84244 Ankrd36-201ENSMUST00000109855 1363 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
H3f3aP84244 Tceanc-202ENSMUST00000112188 4050 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
H3f3aP84244 Ifitm1-202ENSMUST00000106040 560 ntAPPRIS P1 TSL 3 BASIC9.43□□□□□ -0.9
H3f3aP84244 Ifitm1-203ENSMUST00000106042 882 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
H3f3aP84244 Fmr1nb-203ENSMUST00000114647 679 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
H3f3aP84244 Gm12397-201ENSMUST00000117674 615 ntBASIC9.43□□□□□ -0.9
H3f3aP84244 Syngr4-202ENSMUST00000120299 722 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
H3f3aP84244 Gm15136-201ENSMUST00000120552 533 ntBASIC9.43□□□□□ -0.9
H3f3aP84244 Gm13022-201ENSMUST00000121181 285 ntBASIC9.43□□□□□ -0.9
H3f3aP84244 Gm13981-201ENSMUST00000122360 447 ntBASIC9.43□□□□□ -0.9
H3f3aP84244 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
H3f3aP84244 Gm13783-201ENSMUST00000131634 732 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
H3f3aP84244 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC9.43□□□□□ -0.9
H3f3aP84244 Gm12688-201ENSMUST00000136525 701 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
H3f3aP84244 Polr3c-205ENSMUST00000141377 808 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
H3f3aP84244 Gm11915-201ENSMUST00000153669 358 ntTSL 5 BASIC9.43□□□□□ -0.9
H3f3aP84244 Gm23218-201ENSMUST00000158124 276 ntBASIC9.43□□□□□ -0.9
H3f3aP84244 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
H3f3aP84244 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
H3f3aP84244 Gm26272-201ENSMUST00000179241 132 ntBASIC9.43□□□□□ -0.9
H3f3aP84244 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
H3f3aP84244 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC9.43□□□□□ -0.9
H3f3aP84244 Gm29669-201ENSMUST00000188605 881 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
H3f3aP84244 Gm8625-201ENSMUST00000194185 1077 ntBASIC9.43□□□□□ -0.9
H3f3aP84244 Gm42430-201ENSMUST00000197209 616 ntBASIC9.43□□□□□ -0.9
H3f3aP84244 E230034D01Rik-203ENSMUST00000217357 1159 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
H3f3aP84244 Ifitm1-201ENSMUST00000026564 736 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
H3f3aP84244 Gm9758-201ENSMUST00000035980 1167 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
H3f3aP84244 2310016G11Rik-201ENSMUST00000094460 992 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
H3f3aP84244 Myh4-201ENSMUST00000018632 6016 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
H3f3aP84244 A930003O13Rik-202ENSMUST00000197486 3098 ntBASIC9.43□□□□□ -0.9
H3f3aP84244 Ralgps1-202ENSMUST00000091039 2738 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
H3f3aP84244 Gpr39-201ENSMUST00000027581 2691 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
H3f3aP84244 Gtf3c6-206ENSMUST00000217537 2526 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
H3f3aP84244 Immt-205ENSMUST00000166938 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
H3f3aP84244 Adar-204ENSMUST00000118341 2399 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
H3f3aP84244 Mecomos-201ENSMUST00000125611 5510 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
H3f3aP84244 AC129336.1-201ENSMUST00000220224 2277 ntBASIC9.43□□□□□ -0.9
H3f3aP84244 Nfya-201ENSMUST00000046719 3645 ntAPPRIS ALT1 TSL 1 (best) BASIC9.43□□□□□ -0.9
H3f3aP84244 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
H3f3aP84244 Gm19327-201ENSMUST00000220651 3271 ntBASIC9.43□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms