Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Gm1848-201ENSMUST00000120711 789 ntBASIC11.7□□□□□ -0.54
Hmgb1P63158 Gm11465-201ENSMUST00000127942 435 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Hmgb1P63158 Pet100-201ENSMUST00000156380 1193 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hmgb1P63158 4930402C01Rik-201ENSMUST00000192586 663 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Hmgb1P63158 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC11.7□□□□□ -0.54
Hmgb1P63158 Gm44551-201ENSMUST00000208804 171 ntBASIC11.7□□□□□ -0.54
Hmgb1P63158 Gm45550-201ENSMUST00000209380 946 ntBASIC11.7□□□□□ -0.54
Hmgb1P63158 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC11.7□□□□□ -0.54
Hmgb1P63158 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Hmgb1P63158 Cdc23-203ENSMUST00000133181 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hmgb1P63158 Gm44763-201ENSMUST00000208287 2019 ntBASIC11.7□□□□□ -0.54
Hmgb1P63158 AI506816-205ENSMUST00000199941 2804 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Hmgb1P63158 Gm42587-201ENSMUST00000198462 1981 ntBASIC11.7□□□□□ -0.54
Hmgb1P63158 Myom2-201ENSMUST00000033842 5075 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hmgb1P63158 Gm498-202ENSMUST00000152910 1507 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Hmgb1P63158 Fam198b-202ENSMUST00000118853 6729 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Hmgb1P63158 Gm15604-201ENSMUST00000118350 1456 ntBASIC11.7□□□□□ -0.54
Hmgb1P63158 Gm43289-201ENSMUST00000200537 1475 ntBASIC11.7□□□□□ -0.54
Hmgb1P63158 Tcp10a-202ENSMUST00000128533 2589 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hmgb1P63158 Spert-201ENSMUST00000035243 1430 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hmgb1P63158 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hmgb1P63158 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Hmgb1P63158 Ccdc78-201ENSMUST00000095500 1651 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Hmgb1P63158 Gm7168-201ENSMUST00000088809 1603 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hmgb1P63158 Gm26013-201ENSMUST00000104404 119 ntBASIC11.69□□□□□ -0.54
Hmgb1P63158 Art5-203ENSMUST00000106935 495 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Hmgb1P63158 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hmgb1P63158 Gm13438-201ENSMUST00000120100 573 ntBASIC11.69□□□□□ -0.54
Hmgb1P63158 B230307C23Rik-202ENSMUST00000122450 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hmgb1P63158 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Hmgb1P63158 Gzmn-201ENSMUST00000015587 956 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hmgb1P63158 Gm25661-201ENSMUST00000157704 296 ntBASIC11.69□□□□□ -0.54
Hmgb1P63158 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Hmgb1P63158 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC11.69□□□□□ -0.54
Hmgb1P63158 Gm19324-201ENSMUST00000213229 1169 ntBASIC11.69□□□□□ -0.54
Hmgb1P63158 Gm46328-201ENSMUST00000217924 976 ntTSL 5 BASIC11.69□□□□□ -0.54
Hmgb1P63158 AC154680.1-201ENSMUST00000224376 859 ntBASIC11.69□□□□□ -0.54
Hmgb1P63158 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hmgb1P63158 Catsperz-201ENSMUST00000057716 781 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hmgb1P63158 D030047H15Rik-201ENSMUST00000148318 2536 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Hmgb1P63158 Triml2-202ENSMUST00000209200 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hmgb1P63158 Limch1-202ENSMUST00000101164 5192 ntAPPRIS P2 TSL 5 BASIC11.69□□□□□ -0.54
Hmgb1P63158 Nfic-201ENSMUST00000020461 3348 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hmgb1P63158 Arhgap45-202ENSMUST00000099501 3948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hmgb1P63158 Nr2c1-201ENSMUST00000092213 2376 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Hmgb1P63158 Svil-204ENSMUST00000127297 6243 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Hmgb1P63158 Olfr1350-203ENSMUST00000219278 1768 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Hmgb1P63158 Brip1os-202ENSMUST00000143819 2604 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Hmgb1P63158 Gm44056-201ENSMUST00000204623 1427 ntBASIC11.69□□□□□ -0.54
Hmgb1P63158 6430548M08Rik-203ENSMUST00000108950 3125 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hmgb1P63158 Olfr1121-202ENSMUST00000213792 1996 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Hmgb1P63158 Clip1-203ENSMUST00000111561 5883 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Hmgb1P63158 Gm45012-201ENSMUST00000208323 1666 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Hmgb1P63158 Ceacam9-201ENSMUST00000001984 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hmgb1P63158 Ppp1r3c-201ENSMUST00000087321 2719 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hmgb1P63158 Gm38910-201ENSMUST00000204630 2448 ntBASIC11.68□□□□□ -0.54
Hmgb1P63158 Ccr6-205ENSMUST00000177568 1334 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hmgb1P63158 Cenpc1-201ENSMUST00000031170 3192 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hmgb1P63158 Gm35808-201ENSMUST00000204769 2602 ntBASIC11.68□□□□□ -0.54
Hmgb1P63158 Snx31-203ENSMUST00000161202 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hmgb1P63158 Polh-201ENSMUST00000024749 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hmgb1P63158 Pnpla3-201ENSMUST00000045289 4640 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Hmgb1P63158 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Hmgb1P63158 n-R5s14-201ENSMUST00000122688 107 ntBASIC11.68□□□□□ -0.54
Hmgb1P63158 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC11.68□□□□□ -0.54
Hmgb1P63158 Aamdc-207ENSMUST00000138060 467 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Hmgb1P63158 Aamdc-209ENSMUST00000144858 380 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Hmgb1P63158 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hmgb1P63158 Gm5529-201ENSMUST00000165691 891 ntBASIC11.68□□□□□ -0.54
Hmgb1P63158 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hmgb1P63158 Gm16894-201ENSMUST00000181756 842 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Hmgb1P63158 Mir7076-201ENSMUST00000183519 74 ntBASIC11.68□□□□□ -0.54
Hmgb1P63158 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hmgb1P63158 Gm37860-201ENSMUST00000195380 1034 ntBASIC11.68□□□□□ -0.54
Hmgb1P63158 Gm43138-201ENSMUST00000199123 708 ntBASIC11.68□□□□□ -0.54
Hmgb1P63158 4930447C11Rik-201ENSMUST00000204503 928 ntBASIC11.68□□□□□ -0.54
Hmgb1P63158 CT485607.1-201ENSMUST00000216100 85 ntBASIC11.68□□□□□ -0.54
Hmgb1P63158 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC11.68□□□□□ -0.54
Hmgb1P63158 CT030011.1-201ENSMUST00000221959 264 ntTSL 5 BASIC11.68□□□□□ -0.54
Hmgb1P63158 AC164429.1-201ENSMUST00000224210 518 ntBASIC11.68□□□□□ -0.54
Hmgb1P63158 Frmd4b-204ENSMUST00000113359 4311 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Hmgb1P63158 Olfr707-204ENSMUST00000213251 1777 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Hmgb1P63158 4930402K13Rik-201ENSMUST00000059967 1781 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Hmgb1P63158 Plekha7-207ENSMUST00000182511 4502 ntTSL 2 BASIC11.68□□□□□ -0.54
Hmgb1P63158 Mkrn1-204ENSMUST00000114823 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hmgb1P63158 Oas1h-201ENSMUST00000072476 1703 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hmgb1P63158 Hjurp-201ENSMUST00000054674 4878 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hmgb1P63158 Lpxn-201ENSMUST00000025601 1675 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hmgb1P63158 AI854703-202ENSMUST00000154570 3806 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Hmgb1P63158 Vwa5b1-201ENSMUST00000030533 7486 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hmgb1P63158 Prc1-202ENSMUST00000163812 3026 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hmgb1P63158 Piwil1-202ENSMUST00000195959 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hmgb1P63158 Gm43372-201ENSMUST00000202662 3016 ntBASIC11.68□□□□□ -0.54
Hmgb1P63158 Lppos-201ENSMUST00000181640 1603 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Hmgb1P63158 Lin54-209ENSMUST00000152387 2760 ntTSL 5 BASIC11.67□□□□□ -0.54
Hmgb1P63158 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Hmgb1P63158 Adcy8-202ENSMUST00000228014 6900 ntAPPRIS ALT2 BASIC11.67□□□□□ -0.54
Hmgb1P63158 Rxfp2-201ENSMUST00000065745 2539 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Hmgb1P63158 Gm34923-201ENSMUST00000222673 5043 ntTSL 5 BASIC11.67□□□□□ -0.54
Hmgb1P63158 2410004P03Rik-201ENSMUST00000095823 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 91.7 ms