Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Gm12216-207ENSMUST00000220191 1073 ntAPPRIS P5 TSL 5 BASIC10.59□□□□□ -0.71
Atxn1P54254 Gm34667-201ENSMUST00000222974 1258 ntTSL 5 BASIC10.59□□□□□ -0.71
Atxn1P54254 CT025618.1-203ENSMUST00000227008 589 ntBASIC10.59□□□□□ -0.71
Atxn1P54254 AC134793.1-202ENSMUST00000227444 803 ntBASIC10.59□□□□□ -0.71
Atxn1P54254 AC107711.3-201ENSMUST00000228939 1035 ntBASIC10.59□□□□□ -0.71
Atxn1P54254 Rab29-201ENSMUST00000027693 1226 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Atxn1P54254 Cdc42-202ENSMUST00000051477 2108 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Atxn1P54254 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC10.59□□□□□ -0.71
Atxn1P54254 4930579F01Rik-202ENSMUST00000199293 1598 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Atxn1P54254 Cxcl11-201ENSMUST00000077820 1581 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Atxn1P54254 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Atxn1P54254 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Atxn1P54254 Gm13135-201ENSMUST00000117628 3121 ntBASIC10.59□□□□□ -0.71
Atxn1P54254 Slc25a44-202ENSMUST00000168755 3418 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Atxn1P54254 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Atxn1P54254 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC10.59□□□□□ -0.71
Atxn1P54254 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Atxn1P54254 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Atxn1P54254 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC10.59□□□□□ -0.71
Atxn1P54254 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.71
Atxn1P54254 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.71
Atxn1P54254 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Atxn1P54254 Cenpn-203ENSMUST00000212263 1616 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Atxn1P54254 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Atxn1P54254 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC10.58□□□□□ -0.72
Atxn1P54254 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Atxn1P54254 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Atxn1P54254 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Atxn1P54254 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Atxn1P54254 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Atxn1P54254 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Atxn1P54254 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Atxn1P54254 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Atxn1P54254 Rims1-203ENSMUST00000097809 6179 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Atxn1P54254 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Atxn1P54254 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC10.58□□□□□ -0.72
Atxn1P54254 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Atxn1P54254 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Atxn1P54254 Gm13456-201ENSMUST00000118928 1365 ntBASIC10.58□□□□□ -0.72
Atxn1P54254 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Atxn1P54254 Snx10-202ENSMUST00000114439 968 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Atxn1P54254 Gm13688-201ENSMUST00000121557 608 ntBASIC10.58□□□□□ -0.72
Atxn1P54254 Gm45745-201ENSMUST00000211447 1180 ntBASIC10.58□□□□□ -0.72
Atxn1P54254 Gm31378-201ENSMUST00000213538 267 ntTSL 5 BASIC10.58□□□□□ -0.72
Atxn1P54254 Gm18391-201ENSMUST00000217189 658 ntBASIC10.58□□□□□ -0.72
Atxn1P54254 AC192333.3-201ENSMUST00000224041 463 ntBASIC10.58□□□□□ -0.72
Atxn1P54254 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Atxn1P54254 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Atxn1P54254 Tsc2-201ENSMUST00000097373 6018 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Atxn1P54254 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Atxn1P54254 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Atxn1P54254 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Atxn1P54254 Cit-201ENSMUST00000051704 9514 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Atxn1P54254 4930579F01Rik-201ENSMUST00000012186 1732 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Atxn1P54254 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Atxn1P54254 Gm26908-201ENSMUST00000181856 1637 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Atxn1P54254 AC151836.1-201ENSMUST00000228730 1637 ntBASIC10.58□□□□□ -0.72
Atxn1P54254 Kdm4a-204ENSMUST00000106406 4663 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Atxn1P54254 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Atxn1P54254 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Atxn1P54254 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Atxn1P54254 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
Atxn1P54254 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Atxn1P54254 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Atxn1P54254 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Atxn1P54254 Gm37031-201ENSMUST00000195487 2530 ntBASIC10.57□□□□□ -0.72
Atxn1P54254 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Atxn1P54254 Gm30504-201ENSMUST00000209316 1688 ntTSL 5 BASIC10.57□□□□□ -0.72
Atxn1P54254 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Atxn1P54254 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC10.57□□□□□ -0.72
Atxn1P54254 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Atxn1P54254 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC10.57□□□□□ -0.72
Atxn1P54254 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Atxn1P54254 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Atxn1P54254 Mir124a-1hg-201ENSMUST00000180610 4103 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Atxn1P54254 Gm43522-201ENSMUST00000196697 1922 ntBASIC10.57□□□□□ -0.72
Atxn1P54254 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Atxn1P54254 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Atxn1P54254 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Atxn1P54254 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Atxn1P54254 AC167565.1-201ENSMUST00000226980 1833 ntBASIC10.57□□□□□ -0.72
Atxn1P54254 Gm8914-201ENSMUST00000101396 1035 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Atxn1P54254 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Atxn1P54254 Gm5071-201ENSMUST00000104922 1035 ntBASIC10.57□□□□□ -0.72
Atxn1P54254 Gm13326-201ENSMUST00000118730 1011 ntBASIC10.57□□□□□ -0.72
Atxn1P54254 Gm15617-201ENSMUST00000118973 771 ntBASIC10.57□□□□□ -0.72
Atxn1P54254 Gm15793-201ENSMUST00000121857 495 ntBASIC10.57□□□□□ -0.72
Atxn1P54254 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Atxn1P54254 Gm15831-201ENSMUST00000156195 516 ntTSL 2 BASIC10.57□□□□□ -0.72
Atxn1P54254 Fbxo16-201ENSMUST00000169656 1019 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Atxn1P54254 Gm26379-201ENSMUST00000178125 138 ntBASIC10.57□□□□□ -0.72
Atxn1P54254 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC10.57□□□□□ -0.72
Atxn1P54254 Gm44304-201ENSMUST00000200509 145 ntBASIC10.57□□□□□ -0.72
Atxn1P54254 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Atxn1P54254 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC10.57□□□□□ -0.72
Atxn1P54254 Gm31786-201ENSMUST00000212305 564 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Atxn1P54254 Gm19605-205ENSMUST00000221712 677 ntTSL 3 BASIC10.57□□□□□ -0.72
Atxn1P54254 Gm5072-201ENSMUST00000063726 1035 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Atxn1P54254 Gm25514-201ENSMUST00000083860 135 ntBASIC10.57□□□□□ -0.72
Atxn1P54254 Gm44663-201ENSMUST00000206898 3150 ntBASIC10.57□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 86.6 ms