Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 2310002L09Rik-202ENSMUST00000095023 1929 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Rfx3P48381 Gpm6b-207ENSMUST00000112229 3203 ntAPPRIS ALT1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Rfx3P48381 Cwc25-202ENSMUST00000107579 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Rfx3P48381 Babam2-204ENSMUST00000114515 1497 ntTSL 5 BASIC9.54□□□□□ -0.88
Rfx3P48381 Npy1r-201ENSMUST00000039303 3001 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Rfx3P48381 C920021L13Rik-201ENSMUST00000120398 1723 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Rfx3P48381 Stat5a-201ENSMUST00000004145 3888 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Rfx3P48381 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
Rfx3P48381 Gm17213-201ENSMUST00000165161 1360 ntBASIC9.54□□□□□ -0.88
Rfx3P48381 Gpr35-202ENSMUST00000064480 3409 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Rfx3P48381 Sgk3-204ENSMUST00000171265 3680 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Rfx3P48381 Hmgcr-201ENSMUST00000022176 4425 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Rfx3P48381 Col6a5-203ENSMUST00000190193 9289 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Rfx3P48381 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC9.54□□□□□ -0.88
Rfx3P48381 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC9.54□□□□□ -0.88
Rfx3P48381 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC9.54□□□□□ -0.88
Rfx3P48381 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC9.54□□□□□ -0.88
Rfx3P48381 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Rfx3P48381 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
Rfx3P48381 Gm13019-201ENSMUST00000120000 276 ntBASIC9.54□□□□□ -0.88
Rfx3P48381 Scgb2b25-ps-201ENSMUST00000121936 307 ntBASIC9.54□□□□□ -0.88
Rfx3P48381 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Rfx3P48381 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Rfx3P48381 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Rfx3P48381 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC9.54□□□□□ -0.88
Rfx3P48381 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Rfx3P48381 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Rfx3P48381 Gm19013-201ENSMUST00000183895 1222 ntBASIC9.54□□□□□ -0.88
Rfx3P48381 Gm19014-201ENSMUST00000184828 1189 ntBASIC9.54□□□□□ -0.88
Rfx3P48381 Scgb2b27-203ENSMUST00000185399 702 ntAPPRIS ALT2 TSL 2 BASIC9.54□□□□□ -0.88
Rfx3P48381 Gm19927-201ENSMUST00000185792 781 ntBASIC9.54□□□□□ -0.88
Rfx3P48381 Gm5865-201ENSMUST00000198713 637 ntBASIC9.54□□□□□ -0.88
Rfx3P48381 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC9.54□□□□□ -0.88
Rfx3P48381 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC9.54□□□□□ -0.88
Rfx3P48381 Bcl2l12-205ENSMUST00000207755 605 ntAPPRIS ALT2 TSL 2 BASIC9.54□□□□□ -0.88
Rfx3P48381 Gm8285-201ENSMUST00000208293 759 ntBASIC9.54□□□□□ -0.88
Rfx3P48381 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC9.54□□□□□ -0.88
Rfx3P48381 Myl6-203ENSMUST00000217776 562 ntTSL 3 BASIC9.54□□□□□ -0.88
Rfx3P48381 Gm9102-201ENSMUST00000219250 465 ntBASIC9.54□□□□□ -0.88
Rfx3P48381 CT025679.1-201ENSMUST00000227106 449 ntBASIC9.54□□□□□ -0.88
Rfx3P48381 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Rfx3P48381 Olfr225-201ENSMUST00000055276 1260 ntAPPRIS ALT2 BASIC9.54□□□□□ -0.88
Rfx3P48381 Vmn1r212-201ENSMUST00000095960 1164 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
Rfx3P48381 Gm16576-201ENSMUST00000128342 5404 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Rfx3P48381 Ctso-201ENSMUST00000029649 3468 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Rfx3P48381 Ptpn21-201ENSMUST00000085116 5696 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Rfx3P48381 Olfr287-204ENSMUST00000170618 1776 ntAPPRIS P1 TSL 2 BASIC9.54□□□□□ -0.88
Rfx3P48381 Pcdh20-202ENSMUST00000192557 3362 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Rfx3P48381 Tdp1-201ENSMUST00000021594 2019 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Rfx3P48381 Il33-202ENSMUST00000120388 2537 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Rfx3P48381 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Rfx3P48381 Bpifb1-202ENSMUST00000081816 1699 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Rfx3P48381 Acot11-202ENSMUST00000102762 5689 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
Rfx3P48381 Atp6v0a4-202ENSMUST00000114908 3307 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Rfx3P48381 Gpm6b-206ENSMUST00000112228 3083 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Rfx3P48381 Zc3hav1-202ENSMUST00000114898 3052 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Rfx3P48381 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Rfx3P48381 Stpg2-201ENSMUST00000062306 2818 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Rfx3P48381 4931423N10Rik-201ENSMUST00000028113 1842 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Rfx3P48381 Eif2s3y-201ENSMUST00000091197 1836 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Rfx3P48381 F730016J06Rik-201ENSMUST00000126140 1344 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Rfx3P48381 Gm35363-201ENSMUST00000209330 1317 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Rfx3P48381 Scnn1b-201ENSMUST00000033161 2478 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Rfx3P48381 Kif2b-201ENSMUST00000061019 2244 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
Rfx3P48381 Cenpj-203ENSMUST00000225951 4756 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
Rfx3P48381 Tex21-202ENSMUST00000218426 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Rfx3P48381 Cage1-203ENSMUST00000110233 2875 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Rfx3P48381 Gm38312-201ENSMUST00000195426 1746 ntBASIC9.53□□□□□ -0.88
Rfx3P48381 9530026P05Rik-204ENSMUST00000204449 1740 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Rfx3P48381 Plec-215ENSMUST00000169108 14853 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Rfx3P48381 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Rfx3P48381 Zfyve26-201ENSMUST00000021547 9391 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Rfx3P48381 Firre-206ENSMUST00000203933 5555 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Rfx3P48381 Gm3642-201ENSMUST00000166895 1762 ntAPPRIS P5 TSL 5 BASIC9.53□□□□□ -0.88
Rfx3P48381 Dcun1d2-202ENSMUST00000110838 2955 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Rfx3P48381 Svil-203ENSMUST00000126977 7907 ntAPPRIS P3 TSL 5 BASIC9.53□□□□□ -0.88
Rfx3P48381 Hmg20a-206ENSMUST00000217518 2468 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Rfx3P48381 Helz-201ENSMUST00000075012 6218 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Rfx3P48381 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
Rfx3P48381 Mir453-201ENSMUST00000104732 82 ntBASIC9.53□□□□□ -0.88
Rfx3P48381 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Rfx3P48381 Gm11451-201ENSMUST00000118946 630 ntBASIC9.53□□□□□ -0.88
Rfx3P48381 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC9.53□□□□□ -0.88
Rfx3P48381 n-R5s84-201ENSMUST00000122591 109 ntBASIC9.53□□□□□ -0.88
Rfx3P48381 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Rfx3P48381 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC9.53□□□□□ -0.88
Rfx3P48381 6820431F20Rik-201ENSMUST00000150051 936 ntBASIC9.53□□□□□ -0.88
Rfx3P48381 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC9.53□□□□□ -0.88
Rfx3P48381 Gm20441-201ENSMUST00000173512 756 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Rfx3P48381 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC9.53□□□□□ -0.88
Rfx3P48381 Gm44329-201ENSMUST00000197469 112 ntBASIC9.53□□□□□ -0.88
Rfx3P48381 Gm43830-201ENSMUST00000198760 1067 ntBASIC9.53□□□□□ -0.88
Rfx3P48381 Gm18466-201ENSMUST00000209147 499 ntBASIC9.53□□□□□ -0.88
Rfx3P48381 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC9.53□□□□□ -0.88
Rfx3P48381 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC9.53□□□□□ -0.88
Rfx3P48381 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Rfx3P48381 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Rfx3P48381 Prc1-202ENSMUST00000163812 3026 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Rfx3P48381 Nr4a2-201ENSMUST00000028166 3568 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Rfx3P48381 Spns3-201ENSMUST00000021154 1804 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 119.1 ms