Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Hacl1-212ENSMUST00000167066 1566 ntTSL 5 BASIC10.07□□□□□ -0.8
Cdx2P43241 Bgn-207ENSMUST00000169489 1574 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
Cdx2P43241 Iyd-201ENSMUST00000019896 1579 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cdx2P43241 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC10.07□□□□□ -0.8
Cdx2P43241 Gm42641-202ENSMUST00000160217 4248 ntAPPRIS P5 TSL 2 BASIC10.07□□□□□ -0.8
Cdx2P43241 Vwa3b-205ENSMUST00000162449 1360 ntAPPRIS P5 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cdx2P43241 Gm24981-201ENSMUST00000104459 132 ntBASIC10.07□□□□□ -0.8
Cdx2P43241 Gm11569-201ENSMUST00000105057 869 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Cdx2P43241 Tomm5-203ENSMUST00000107809 738 ntTSL 3 BASIC10.07□□□□□ -0.8
Cdx2P43241 Gm13547-202ENSMUST00000113810 629 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cdx2P43241 Rplp1-ps1-201ENSMUST00000119410 345 ntBASIC10.07□□□□□ -0.8
Cdx2P43241 Smt3h2-ps2-201ENSMUST00000122370 288 ntBASIC10.07□□□□□ -0.8
Cdx2P43241 Glrx2-206ENSMUST00000145969 924 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cdx2P43241 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC10.07□□□□□ -0.8
Cdx2P43241 Gm19668-201ENSMUST00000178581 747 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Cdx2P43241 D130017N08Rik-201ENSMUST00000180460 510 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Cdx2P43241 Gm26957-201ENSMUST00000182645 977 ntBASIC10.07□□□□□ -0.8
Cdx2P43241 Gm18552-201ENSMUST00000187425 538 ntBASIC10.07□□□□□ -0.8
Cdx2P43241 Gm29135-201ENSMUST00000188411 612 ntTSL 5 BASIC10.07□□□□□ -0.8
Cdx2P43241 Gm46328-201ENSMUST00000217924 976 ntTSL 5 BASIC10.07□□□□□ -0.8
Cdx2P43241 Gm2696-201ENSMUST00000220062 723 ntAPPRIS P5 BASIC10.07□□□□□ -0.8
Cdx2P43241 1700029N11Rik-203ENSMUST00000220639 1092 ntTSL 5 BASIC10.07□□□□□ -0.8
Cdx2P43241 Hesx1-202ENSMUST00000224331 983 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Cdx2P43241 AC127583.1-201ENSMUST00000224351 540 ntBASIC10.07□□□□□ -0.8
Cdx2P43241 AC159006.3-201ENSMUST00000226918 664 ntBASIC10.07□□□□□ -0.8
Cdx2P43241 Olfr414-201ENSMUST00000053178 955 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Cdx2P43241 Gm9790-201ENSMUST00000054148 288 ntBASIC10.07□□□□□ -0.8
Cdx2P43241 Gm6304-201ENSMUST00000096579 447 ntBASIC10.07□□□□□ -0.8
Cdx2P43241 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Cdx2P43241 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cdx2P43241 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Cdx2P43241 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Cdx2P43241 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC10.07□□□□□ -0.8
Cdx2P43241 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cdx2P43241 Gm28624-201ENSMUST00000186430 2131 ntBASIC10.07□□□□□ -0.8
Cdx2P43241 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cdx2P43241 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cdx2P43241 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cdx2P43241 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC10.07□□□□□ -0.8
Cdx2P43241 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Cdx2P43241 4930432L08Rik-201ENSMUST00000132154 1608 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Cdx2P43241 AC124433.1-202ENSMUST00000224762 1535 ntBASIC10.07□□□□□ -0.8
Cdx2P43241 Lrrc23-202ENSMUST00000112475 1444 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cdx2P43241 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Cdx2P43241 Txndc16-203ENSMUST00000123879 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cdx2P43241 Elmod3-202ENSMUST00000114069 2164 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cdx2P43241 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cdx2P43241 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC10.07□□□□□ -0.8
Cdx2P43241 Gm26953-209ENSMUST00000213051 2087 ntTSL 5 BASIC10.06□□□□□ -0.8
Cdx2P43241 Arhgap33os-201ENSMUST00000124276 2648 ntTSL 2 BASIC10.06□□□□□ -0.8
Cdx2P43241 Gm21142-201ENSMUST00000179999 2604 ntBASIC10.06□□□□□ -0.8
Cdx2P43241 Gm43713-201ENSMUST00000198251 1896 ntTSL 5 BASIC10.06□□□□□ -0.8
Cdx2P43241 AC130671.3-201ENSMUST00000227393 1897 ntBASIC10.06□□□□□ -0.8
Cdx2P43241 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cdx2P43241 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC10.06□□□□□ -0.8
Cdx2P43241 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cdx2P43241 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cdx2P43241 Gm45170-201ENSMUST00000206746 1671 ntBASIC10.06□□□□□ -0.8
Cdx2P43241 C2cd5-201ENSMUST00000087485 4265 ntTSL 5 BASIC10.06□□□□□ -0.8
Cdx2P43241 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Cdx2P43241 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cdx2P43241 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cdx2P43241 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cdx2P43241 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Cdx2P43241 Stk4-201ENSMUST00000018353 5232 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cdx2P43241 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cdx2P43241 Olfr95-201ENSMUST00000060728 5129 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
Cdx2P43241 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC10.06□□□□□ -0.8
Cdx2P43241 Use1-203ENSMUST00000110054 973 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cdx2P43241 Maats1os-201ENSMUST00000133496 326 ntTSL 3 BASIC10.06□□□□□ -0.8
Cdx2P43241 Ptpa-210ENSMUST00000136009 810 ntTSL 3 BASIC10.06□□□□□ -0.8
Cdx2P43241 Gm13191-201ENSMUST00000136489 416 ntTSL 3 BASIC10.06□□□□□ -0.8
Cdx2P43241 Optc-204ENSMUST00000149380 1180 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Cdx2P43241 Gm7211-201ENSMUST00000172692 1118 ntBASIC10.06□□□□□ -0.8
Cdx2P43241 Gm28746-201ENSMUST00000187453 380 ntBASIC10.06□□□□□ -0.8
Cdx2P43241 Gm37141-201ENSMUST00000191938 422 ntBASIC10.06□□□□□ -0.8
Cdx2P43241 Gm3945-201ENSMUST00000196637 683 ntBASIC10.06□□□□□ -0.8
Cdx2P43241 Gm40153-201ENSMUST00000197904 637 ntTSL 3 BASIC10.06□□□□□ -0.8
Cdx2P43241 Ckb-ps2-201ENSMUST00000198886 1001 ntBASIC10.06□□□□□ -0.8
Cdx2P43241 Gm44155-201ENSMUST00000203923 412 ntBASIC10.06□□□□□ -0.8
Cdx2P43241 Gm32098-201ENSMUST00000211305 479 ntTSL 5 BASIC10.06□□□□□ -0.8
Cdx2P43241 Pcbd1-202ENSMUST00000218005 361 ntTSL 3 BASIC10.06□□□□□ -0.8
Cdx2P43241 Nqo2-203ENSMUST00000220844 957 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Cdx2P43241 AC161052.1-201ENSMUST00000222856 910 ntTSL 5 BASIC10.06□□□□□ -0.8
Cdx2P43241 Scgb1c1-201ENSMUST00000035300 455 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
Cdx2P43241 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Cdx2P43241 9530026P05Rik-204ENSMUST00000204449 1740 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Cdx2P43241 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cdx2P43241 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cdx2P43241 Pigc-205ENSMUST00000193784 4207 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
Cdx2P43241 Dcstamp-201ENSMUST00000022913 1997 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cdx2P43241 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Cdx2P43241 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cdx2P43241 Zfp110-201ENSMUST00000004614 3591 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cdx2P43241 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cdx2P43241 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Cdx2P43241 Gm12498-201ENSMUST00000138374 2458 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Cdx2P43241 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cdx2P43241 Cd247-202ENSMUST00000027849 1317 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Cdx2P43241 Tulp2-210ENSMUST00000210868 1664 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms