Protein–RNA interactions for Protein: P31041

Cd28, T-cell-specific surface glycoprotein CD28, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd28P31041 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC9.23□□□□□ -0.93
Cd28P31041 Pla2g5-203ENSMUST00000102512 1976 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cd28P31041 Gm10804-201ENSMUST00000099693 2244 ntTSL 2 BASIC9.23□□□□□ -0.93
Cd28P31041 Rxfp2-202ENSMUST00000110496 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cd28P31041 Pex5l-204ENSMUST00000108224 2721 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Cd28P31041 Crispld1-201ENSMUST00000095075 4472 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cd28P31041 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC9.23□□□□□ -0.93
Cd28P31041 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Cd28P31041 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Cd28P31041 Gng2-203ENSMUST00000159073 960 ntAPPRIS P1 TSL 2 BASIC9.23□□□□□ -0.93
Cd28P31041 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Cd28P31041 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cd28P31041 Gm17709-201ENSMUST00000174536 1096 ntBASIC9.23□□□□□ -0.93
Cd28P31041 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Cd28P31041 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC9.23□□□□□ -0.93
Cd28P31041 Gm37826-201ENSMUST00000195329 322 ntBASIC9.23□□□□□ -0.93
Cd28P31041 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cd28P31041 Gm18212-201ENSMUST00000211678 889 ntBASIC9.23□□□□□ -0.93
Cd28P31041 AC153512.3-201ENSMUST00000220426 662 ntTSL 3 BASIC9.23□□□□□ -0.93
Cd28P31041 AC129975.1-201ENSMUST00000224816 592 ntBASIC9.23□□□□□ -0.93
Cd28P31041 Mrps11-201ENSMUST00000032840 1056 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cd28P31041 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cd28P31041 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC9.23□□□□□ -0.93
Cd28P31041 Ginm1-202ENSMUST00000065124 300 ntBASIC9.23□□□□□ -0.93
Cd28P31041 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cd28P31041 Padi3-201ENSMUST00000026377 3072 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cd28P31041 Eef2-201ENSMUST00000047864 3089 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cd28P31041 Cux1-211ENSMUST00000176745 2831 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Cd28P31041 Ubap2-201ENSMUST00000030143 4368 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cd28P31041 Grin2a-201ENSMUST00000032331 4395 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cd28P31041 Gmeb2-201ENSMUST00000049032 4121 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cd28P31041 Limch1-202ENSMUST00000101164 5192 ntAPPRIS P2 TSL 5 BASIC9.23□□□□□ -0.93
Cd28P31041 Gm42971-201ENSMUST00000199228 2079 ntBASIC9.23□□□□□ -0.93
Cd28P31041 Cyp2e1-201ENSMUST00000026552 1833 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cd28P31041 Nckap5-208ENSMUST00000161954 7090 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cd28P31041 Ank1-215ENSMUST00000173248 7100 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cd28P31041 AC165148.1-201ENSMUST00000224795 2372 ntBASIC9.23□□□□□ -0.93
Cd28P31041 Atp10d-202ENSMUST00000126664 6052 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cd28P31041 St5-203ENSMUST00000084738 3161 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
Cd28P31041 Gm8899-201ENSMUST00000214635 1332 ntBASIC9.23□□□□□ -0.93
Cd28P31041 Ptpn7-202ENSMUST00000167080 2945 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cd28P31041 Agbl5-201ENSMUST00000069705 2922 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cd28P31041 Olfr410-202ENSMUST00000213831 5070 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
Cd28P31041 Gm42031-201ENSMUST00000209823 1885 ntTSL 5 BASIC9.23□□□□□ -0.93
Cd28P31041 AC156631.1-201ENSMUST00000215213 1358 ntTSL 5 BASIC9.23□□□□□ -0.93
Cd28P31041 Mid1-204ENSMUST00000112104 3860 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
Cd28P31041 Rreb1-207ENSMUST00000128570 8436 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
Cd28P31041 Hapln3-203ENSMUST00000206092 3358 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cd28P31041 1810041L15Rik-201ENSMUST00000080751 5917 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cd28P31041 Pex2-201ENSMUST00000059021 1749 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cd28P31041 Bloc1s6-201ENSMUST00000005954 3484 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cd28P31041 Nod2-203ENSMUST00000118370 4653 ntAPPRIS P2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cd28P31041 Fignl1-207ENSMUST00000171938 2974 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cd28P31041 Rab27a-201ENSMUST00000034722 2979 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cd28P31041 Zbtb34-202ENSMUST00000113158 6602 ntAPPRIS P1 TSL 3 BASIC9.22□□□□□ -0.93
Cd28P31041 Ssrp1-209ENSMUST00000168266 2721 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cd28P31041 Fbxo32-201ENSMUST00000022986 6976 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cd28P31041 Idua-202ENSMUST00000112563 3373 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cd28P31041 Nrbp2-201ENSMUST00000019516 2495 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Cd28P31041 Tet3-202ENSMUST00000089622 10904 ntTSL 5 BASIC9.22□□□□□ -0.93
Cd28P31041 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC9.22□□□□□ -0.93
Cd28P31041 Man1b1-201ENSMUST00000042390 3755 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cd28P31041 Fcgr2b-204ENSMUST00000159969 1578 ntAPPRIS P4 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cd28P31041 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
Cd28P31041 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
Cd28P31041 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cd28P31041 Bex3-203ENSMUST00000113113 766 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cd28P31041 Gm12389-201ENSMUST00000117696 418 ntBASIC9.22□□□□□ -0.93
Cd28P31041 Gm14277-201ENSMUST00000121195 360 ntBASIC9.22□□□□□ -0.93
Cd28P31041 Tnfrsf14-201ENSMUST00000123514 1018 ntAPPRIS P2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cd28P31041 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
Cd28P31041 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cd28P31041 Gm16165-201ENSMUST00000160140 795 ntBASIC9.22□□□□□ -0.93
Cd28P31041 Gm20441-201ENSMUST00000173512 756 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
Cd28P31041 Gm13272-201ENSMUST00000179425 811 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
Cd28P31041 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
Cd28P31041 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Cd28P31041 Gm5732-201ENSMUST00000182596 1007 ntBASIC9.22□□□□□ -0.93
Cd28P31041 Gm2260-201ENSMUST00000184965 657 ntBASIC9.22□□□□□ -0.93
Cd28P31041 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC9.22□□□□□ -0.93
Cd28P31041 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC9.22□□□□□ -0.93
Cd28P31041 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC9.22□□□□□ -0.93
Cd28P31041 Gm46328-201ENSMUST00000217924 976 ntTSL 5 BASIC9.22□□□□□ -0.93
Cd28P31041 CT010506.1-201ENSMUST00000223673 349 ntBASIC9.22□□□□□ -0.93
Cd28P31041 Rhox8-201ENSMUST00000071885 1204 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cd28P31041 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cd28P31041 Pakap-203ENSMUST00000150412 5163 ntAPPRIS P5 TSL 5 BASIC9.22□□□□□ -0.93
Cd28P31041 Tmprss11c-201ENSMUST00000059424 1615 ntAPPRIS P2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cd28P31041 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cd28P31041 Zfhx3-201ENSMUST00000043896 16433 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cd28P31041 Gm19410-201ENSMUST00000207505 6352 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
Cd28P31041 Slc13a4-201ENSMUST00000031868 3427 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cd28P31041 Mymk-201ENSMUST00000009358 1382 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cd28P31041 Stoml3-201ENSMUST00000029307 1780 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cd28P31041 Acta2-201ENSMUST00000039631 1781 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cd28P31041 Colec11-201ENSMUST00000036136 1423 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cd28P31041 Gm45768-201ENSMUST00000206763 3202 ntBASIC9.22□□□□□ -0.93
Cd28P31041 Mthfd1-201ENSMUST00000021443 3241 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cd28P31041 Itga10-201ENSMUST00000029744 5044 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
Cd28P31041 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms