Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 AC138284.4-201ENSMUST00000216704 2882 ntBASIC9.63□□□□□ -0.87
Nedd8P29595 Limk2-202ENSMUST00000101640 3711 ntTSL 5 BASIC9.63□□□□□ -0.87
Nedd8P29595 Inpp4b-212ENSMUST00000215332 5486 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Nedd8P29595 Col4a5-202ENSMUST00000112931 6536 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Nedd8P29595 Gpr63-201ENSMUST00000038920 2370 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Nedd8P29595 Hacl1-214ENSMUST00000167175 1739 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Nedd8P29595 Gm15663-201ENSMUST00000145794 3200 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Nedd8P29595 Zmym5-203ENSMUST00000173954 5357 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Nedd8P29595 Fam53b-206ENSMUST00000106168 3630 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Nedd8P29595 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Nedd8P29595 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC9.63□□□□□ -0.87
Nedd8P29595 Gm6397-201ENSMUST00000161973 1069 ntBASIC9.63□□□□□ -0.87
Nedd8P29595 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Nedd8P29595 1700063K16Rik-202ENSMUST00000191341 952 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Nedd8P29595 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Nedd8P29595 Gm2253-201ENSMUST00000211775 414 ntBASIC9.63□□□□□ -0.87
Nedd8P29595 Gm7344-201ENSMUST00000212122 1222 ntBASIC9.63□□□□□ -0.87
Nedd8P29595 Gm21027-201ENSMUST00000219300 1236 ntBASIC9.63□□□□□ -0.87
Nedd8P29595 AC124581.2-201ENSMUST00000225459 282 ntBASIC9.63□□□□□ -0.87
Nedd8P29595 Gm9826-201ENSMUST00000029124 1299 ntBASIC9.63□□□□□ -0.87
Nedd8P29595 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Nedd8P29595 Gm9823-201ENSMUST00000051212 327 ntBASIC9.63□□□□□ -0.87
Nedd8P29595 Prpf40a-201ENSMUST00000076313 7374 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Nedd8P29595 Nlrc5-207ENSMUST00000211816 7578 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Nedd8P29595 2310065F04Rik-201ENSMUST00000125538 2724 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Nedd8P29595 Dntt-202ENSMUST00000112200 2068 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Nedd8P29595 Pla2g16-201ENSMUST00000025925 3523 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Nedd8P29595 Add2-210ENSMUST00000205034 3266 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Nedd8P29595 Kdm4a-201ENSMUST00000050288 3279 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Nedd8P29595 Erc1-203ENSMUST00000183703 8760 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Nedd8P29595 Gm37962-201ENSMUST00000195535 2034 ntBASIC9.63□□□□□ -0.87
Nedd8P29595 Osbpl9-218ENSMUST00000162787 2408 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Nedd8P29595 Tbx22-202ENSMUST00000118986 3035 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Nedd8P29595 Snrpd3-201ENSMUST00000020397 3036 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Nedd8P29595 Cdc25b-202ENSMUST00000079857 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Nedd8P29595 Lrrc4-201ENSMUST00000062304 3615 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
Nedd8P29595 Tpp2-207ENSMUST00000188313 4631 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Nedd8P29595 Egf-201ENSMUST00000029653 4761 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Nedd8P29595 Fbxo34-204ENSMUST00000165714 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Nedd8P29595 Sytl4-202ENSMUST00000113294 2958 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Nedd8P29595 Ctns-201ENSMUST00000006103 2570 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Nedd8P29595 Gpr85-202ENSMUST00000115491 2165 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
Nedd8P29595 Gm20758-201ENSMUST00000220339 2171 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Nedd8P29595 Etv1-204ENSMUST00000160701 1578 ntTSL 5 BASIC9.63□□□□□ -0.87
Nedd8P29595 Arxes1-201ENSMUST00000057625 1580 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
Nedd8P29595 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Nedd8P29595 Mymk-201ENSMUST00000009358 1382 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Nedd8P29595 Abcc8-201ENSMUST00000033123 4877 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Nedd8P29595 Fgf6-201ENSMUST00000000187 4657 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Nedd8P29595 Dio2-201ENSMUST00000082432 5815 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Nedd8P29595 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Nedd8P29595 Ccnc-202ENSMUST00000102997 3365 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Nedd8P29595 Foxm1-201ENSMUST00000073316 4652 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Nedd8P29595 Odf2-210ENSMUST00000113765 3188 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Nedd8P29595 Stk11ip-201ENSMUST00000027414 4458 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Nedd8P29595 Tnik-201ENSMUST00000159236 12276 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Nedd8P29595 Tbcel-203ENSMUST00000125995 4849 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Nedd8P29595 Prdx3-201ENSMUST00000025961 1478 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Nedd8P29595 Gm14326-203ENSMUST00000108932 888 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Nedd8P29595 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC9.62□□□□□ -0.87
Nedd8P29595 Gm12986-201ENSMUST00000119037 967 ntBASIC9.62□□□□□ -0.87
Nedd8P29595 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC9.62□□□□□ -0.87
Nedd8P29595 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC9.62□□□□□ -0.87
Nedd8P29595 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC9.62□□□□□ -0.87
Nedd8P29595 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC9.62□□□□□ -0.87
Nedd8P29595 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Nedd8P29595 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Nedd8P29595 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Nedd8P29595 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC9.62□□□□□ -0.87
Nedd8P29595 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Nedd8P29595 Gm8856-201ENSMUST00000185254 1144 ntBASIC9.62□□□□□ -0.87
Nedd8P29595 Gm42780-201ENSMUST00000197083 734 ntBASIC9.62□□□□□ -0.87
Nedd8P29595 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC9.62□□□□□ -0.87
Nedd8P29595 Gm32296-201ENSMUST00000220590 1057 ntTSL 3 BASIC9.62□□□□□ -0.87
Nedd8P29595 AC154276.3-201ENSMUST00000227643 998 ntBASIC9.62□□□□□ -0.87
Nedd8P29595 Hmgb4-201ENSMUST00000053830 746 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Nedd8P29595 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Nedd8P29595 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Nedd8P29595 Gm26658-201ENSMUST00000181067 2500 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Nedd8P29595 Ndst3-206ENSMUST00000154668 5570 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Nedd8P29595 Rcan2-201ENSMUST00000044792 3237 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Nedd8P29595 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Nedd8P29595 Babam2-201ENSMUST00000063813 1410 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Nedd8P29595 Bco2-201ENSMUST00000119103 2118 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Nedd8P29595 Gimap8-203ENSMUST00000203509 3138 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Nedd8P29595 Bhlhe40-201ENSMUST00000032194 3113 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Nedd8P29595 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC9.62□□□□□ -0.87
Nedd8P29595 C920021L13Rik-201ENSMUST00000120398 1723 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Nedd8P29595 Zfp354a-201ENSMUST00000020628 1719 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
Nedd8P29595 Bpifb2-201ENSMUST00000028983 1730 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Nedd8P29595 AU018091-201ENSMUST00000171749 3449 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Nedd8P29595 Apol7b-201ENSMUST00000089469 2210 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Nedd8P29595 Nuggc-202ENSMUST00000150897 2745 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Nedd8P29595 Lipe-204ENSMUST00000149349 3713 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Nedd8P29595 Mark1-201ENSMUST00000027929 4221 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Nedd8P29595 Mcm5-201ENSMUST00000164309 3381 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Nedd8P29595 Mcm10-202ENSMUST00000102985 4867 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Nedd8P29595 Apba2-206ENSMUST00000206246 3027 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Nedd8P29595 Washc4-201ENSMUST00000038388 5858 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Nedd8P29595 Pik3cg-201ENSMUST00000053215 5871 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms