Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Vcam1P29533 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC12.13□□□□□ -0.47
Vcam1P29533 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Vcam1P29533 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Vcam1P29533 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Vcam1P29533 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC12.13□□□□□ -0.47
Vcam1P29533 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Vcam1P29533 AC125351.1-201ENSMUST00000221438 2223 ntBASIC12.13□□□□□ -0.47
Vcam1P29533 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Vcam1P29533 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Vcam1P29533 Casp14-201ENSMUST00000005488 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vcam1P29533 Ighv8-6-201ENSMUST00000103524 301 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Vcam1P29533 Gm11569-201ENSMUST00000105057 869 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Vcam1P29533 Scgb1b29-201ENSMUST00000108094 282 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vcam1P29533 Gm14853-201ENSMUST00000116081 549 ntBASIC12.13□□□□□ -0.47
Vcam1P29533 Gm15602-201ENSMUST00000116162 465 ntBASIC12.13□□□□□ -0.47
Vcam1P29533 Gm8864-201ENSMUST00000118653 1010 ntBASIC12.13□□□□□ -0.47
Vcam1P29533 Gm16480-201ENSMUST00000120439 832 ntBASIC12.13□□□□□ -0.47
Vcam1P29533 Pitpnm2os2-201ENSMUST00000159053 828 ntTSL 2 BASIC12.13□□□□□ -0.47
Vcam1P29533 Pttg1ip-208ENSMUST00000162943 721 ntAPPRIS ALT2 TSL 3 BASIC12.13□□□□□ -0.47
Vcam1P29533 Gm27241-201ENSMUST00000183517 622 ntTSL 3 BASIC12.13□□□□□ -0.47
Vcam1P29533 6030460B20Rik-201ENSMUST00000191764 1058 ntBASIC12.13□□□□□ -0.47
Vcam1P29533 Gm8828-201ENSMUST00000196786 1290 ntBASIC12.13□□□□□ -0.47
Vcam1P29533 Nme6-206ENSMUST00000197627 905 ntTSL 3 BASIC12.13□□□□□ -0.47
Vcam1P29533 Gm45090-201ENSMUST00000208775 1148 ntBASIC12.13□□□□□ -0.47
Vcam1P29533 Gm45783-201ENSMUST00000210877 656 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
Vcam1P29533 CT025642.1-201ENSMUST00000224734 1219 ntBASIC12.13□□□□□ -0.47
Vcam1P29533 Gm5513-201ENSMUST00000072982 1218 ntBASIC12.13□□□□□ -0.47
Vcam1P29533 Iah1-201ENSMUST00000076813 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vcam1P29533 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vcam1P29533 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC12.13□□□□□ -0.47
Vcam1P29533 Sfxn1-201ENSMUST00000021930 2783 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vcam1P29533 Atp13a4-201ENSMUST00000039090 2878 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Vcam1P29533 Eif2s2-201ENSMUST00000099173 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vcam1P29533 Gm16982-201ENSMUST00000181275 2620 ntTSL 2 BASIC12.13□□□□□ -0.47
Vcam1P29533 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Vcam1P29533 Phf21a-205ENSMUST00000111291 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vcam1P29533 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vcam1P29533 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vcam1P29533 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vcam1P29533 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Vcam1P29533 AC154528.2-201ENSMUST00000228432 3023 ntBASIC12.13□□□□□ -0.47
Vcam1P29533 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vcam1P29533 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC12.13□□□□□ -0.47
Vcam1P29533 Gm10699-201ENSMUST00000098916 2130 ntBASIC12.13□□□□□ -0.47
Vcam1P29533 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC12.13□□□□□ -0.47
Vcam1P29533 H2-T3-204ENSMUST00000102675 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vcam1P29533 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vcam1P29533 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Vcam1P29533 Gm5174-201ENSMUST00000171131 1423 ntBASIC12.12□□□□□ -0.47
Vcam1P29533 Tstd2-202ENSMUST00000107772 3726 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vcam1P29533 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vcam1P29533 Arhgap25-201ENSMUST00000071024 2635 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Vcam1P29533 Fcrl1-206ENSMUST00000194786 1540 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vcam1P29533 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vcam1P29533 Cycs-202ENSMUST00000161401 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vcam1P29533 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vcam1P29533 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Vcam1P29533 5730403I07Rik-201ENSMUST00000183878 2033 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Vcam1P29533 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vcam1P29533 Rplp1-ps1-201ENSMUST00000119410 345 ntBASIC12.12□□□□□ -0.47
Vcam1P29533 Gm12420-201ENSMUST00000119869 1048 ntBASIC12.12□□□□□ -0.47
Vcam1P29533 4930538E20Rik-201ENSMUST00000131383 546 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Vcam1P29533 Maats1os-201ENSMUST00000133496 326 ntTSL 3 BASIC12.12□□□□□ -0.47
Vcam1P29533 Gm15650-201ENSMUST00000135451 770 ntTSL 3 BASIC12.12□□□□□ -0.47
Vcam1P29533 Zfp961-204ENSMUST00000136516 601 ntTSL 2 BASIC12.12□□□□□ -0.47
Vcam1P29533 Gm16574-201ENSMUST00000159301 745 ntBASIC12.12□□□□□ -0.47
Vcam1P29533 Gm16581-201ENSMUST00000160730 991 ntBASIC12.12□□□□□ -0.47
Vcam1P29533 Vmn2r-ps9-201ENSMUST00000177446 1099 ntBASIC12.12□□□□□ -0.47
Vcam1P29533 Gm20474-201ENSMUST00000180089 596 ntBASIC12.12□□□□□ -0.47
Vcam1P29533 Gm43275-201ENSMUST00000202053 1020 ntBASIC12.12□□□□□ -0.47
Vcam1P29533 Olfr30-202ENSMUST00000215691 2404 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Vcam1P29533 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vcam1P29533 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vcam1P29533 Igsf11-202ENSMUST00000114706 1578 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Vcam1P29533 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
Vcam1P29533 Pgbd5-206ENSMUST00000172566 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vcam1P29533 Camk2g-202ENSMUST00000080440 3604 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vcam1P29533 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vcam1P29533 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vcam1P29533 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Vcam1P29533 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vcam1P29533 9530059O14Rik-204ENSMUST00000215759 1606 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Vcam1P29533 Gm37660-201ENSMUST00000192754 1732 ntBASIC12.11□□□□□ -0.47
Vcam1P29533 Rint1-203ENSMUST00000115113 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vcam1P29533 Gpr37-202ENSMUST00000200812 3035 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Vcam1P29533 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC12.11□□□□□ -0.47
Vcam1P29533 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vcam1P29533 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Vcam1P29533 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vcam1P29533 Gm42974-201ENSMUST00000199556 2654 ntBASIC12.11□□□□□ -0.47
Vcam1P29533 Trp63-207ENSMUST00000115308 2380 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Vcam1P29533 Bpifb9b-201ENSMUST00000088921 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vcam1P29533 Slc25a51-201ENSMUST00000107796 4433 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Vcam1P29533 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Vcam1P29533 Gm24471-201ENSMUST00000104485 131 ntBASIC12.11□□□□□ -0.47
Vcam1P29533 Klrc2-202ENSMUST00000112057 1149 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vcam1P29533 Shf-205ENSMUST00000121237 882 ntTSL 3 BASIC12.11□□□□□ -0.47
Vcam1P29533 D430040D24Rik-201ENSMUST00000149224 910 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Vcam1P29533 Gm13780-201ENSMUST00000150482 1187 ntTSL 5 BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms