Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Gm8752-201ENSMUST00000173427 1694 ntBASIC8.82□□□□□ -1
Col8a2P25318 Gm12097-201ENSMUST00000121523 1414 ntBASIC8.82□□□□□ -1
Col8a2P25318 Gm12474-201ENSMUST00000122898 1410 ntTSL 2 BASIC8.82□□□□□ -1
Col8a2P25318 Gm15651-201ENSMUST00000159953 2507 ntTSL 1 (best) BASIC8.82□□□□□ -1
Col8a2P25318 Pigo-202ENSMUST00000098109 4239 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
Col8a2P25318 Gm10463-202ENSMUST00000195772 2889 ntBASIC8.82□□□□□ -1
Col8a2P25318 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC8.82□□□□□ -1
Col8a2P25318 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
Col8a2P25318 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Col8a2P25318 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Col8a2P25318 Olfr1263-201ENSMUST00000111507 1029 ntAPPRIS P1 BASIC8.82□□□□□ -1
Col8a2P25318 Gm7541-201ENSMUST00000118361 535 ntBASIC8.82□□□□□ -1
Col8a2P25318 Gm15032-201ENSMUST00000118547 411 ntBASIC8.82□□□□□ -1
Col8a2P25318 Gm25288-201ENSMUST00000122800 265 ntBASIC8.82□□□□□ -1
Col8a2P25318 Aif1l-207ENSMUST00000148056 670 ntTSL 5 BASIC8.82□□□□□ -1
Col8a2P25318 Gm26313-201ENSMUST00000157770 308 ntBASIC8.82□□□□□ -1
Col8a2P25318 Gm25226-201ENSMUST00000158198 123 ntBASIC8.82□□□□□ -1
Col8a2P25318 Ubl5-203ENSMUST00000160124 501 ntAPPRIS P1 TSL 2 BASIC8.82□□□□□ -1
Col8a2P25318 Gm16226-204ENSMUST00000162639 423 ntTSL 3 BASIC8.82□□□□□ -1
Col8a2P25318 Gm3115-202ENSMUST00000177660 618 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
Col8a2P25318 Gm6337-203ENSMUST00000177662 618 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
Col8a2P25318 Gm5808-201ENSMUST00000178090 357 ntBASIC8.82□□□□□ -1
Col8a2P25318 Gm3727-202ENSMUST00000178251 618 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
Col8a2P25318 Dnajc4-202ENSMUST00000179118 840 ntAPPRIS P2 TSL 1 (best) BASIC8.82□□□□□ -1
Col8a2P25318 Mir8111-201ENSMUST00000184463 137 ntBASIC8.82□□□□□ -1
Col8a2P25318 Gm35584-201ENSMUST00000191767 641 ntTSL 5 BASIC8.82□□□□□ -1
Col8a2P25318 Ighv1-2-201ENSMUST00000195325 378 ntBASIC8.82□□□□□ -1
Col8a2P25318 Fabp6-201ENSMUST00000020672 479 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Col8a2P25318 Btg4-203ENSMUST00000213680 1282 ntAPPRIS P2 TSL 1 (best) BASIC8.82□□□□□ -1
Col8a2P25318 AC126799.1-201ENSMUST00000221976 246 ntBASIC8.82□□□□□ -1
Col8a2P25318 AC161172.1-201ENSMUST00000227801 486 ntBASIC8.82□□□□□ -1
Col8a2P25318 Mir326-201ENSMUST00000083637 95 ntBASIC8.82□□□□□ -1
Col8a2P25318 Tbc1d31-201ENSMUST00000022992 3311 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Col8a2P25318 Gtf2ird1-204ENSMUST00000100652 3693 ntAPPRIS P4 TSL 1 (best) BASIC8.82□□□□□ -1
Col8a2P25318 Mrgpre-201ENSMUST00000054048 3761 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Col8a2P25318 Gm37516-201ENSMUST00000192593 1954 ntBASIC8.82□□□□□ -1
Col8a2P25318 Sept9-204ENSMUST00000106349 2932 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
Col8a2P25318 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Col8a2P25318 Gm42971-201ENSMUST00000199228 2079 ntBASIC8.82□□□□□ -1
Col8a2P25318 Gm29101-201ENSMUST00000188329 1471 ntBASIC8.82□□□□□ -1
Col8a2P25318 Col19a1-202ENSMUST00000115244 4266 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Col8a2P25318 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
Col8a2P25318 Zer1-201ENSMUST00000044751 4100 ntTSL 1 (best) BASIC8.82□□□□□ -1
Col8a2P25318 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Col8a2P25318 Arvcf-203ENSMUST00000115612 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Col8a2P25318 Gm15883-201ENSMUST00000153562 1690 ntTSL 1 (best) BASIC8.81□□□□□ -1
Col8a2P25318 Tor1aip2-204ENSMUST00000111754 2491 ntTSL 1 (best) BASIC8.81□□□□□ -1
Col8a2P25318 Pnpla6-201ENSMUST00000004681 4438 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Col8a2P25318 Trim34a-201ENSMUST00000060315 2590 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Col8a2P25318 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
Col8a2P25318 Dmtf1-201ENSMUST00000071921 3806 ntAPPRIS P2 TSL 1 (best) BASIC8.81□□□□□ -1
Col8a2P25318 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC8.81□□□□□ -1
Col8a2P25318 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
Col8a2P25318 Cdh1-203ENSMUST00000167688 3203 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
Col8a2P25318 3000002C10Rik-201ENSMUST00000125451 1614 ntTSL 2 BASIC8.81□□□□□ -1
Col8a2P25318 Rps6-201ENSMUST00000102814 878 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Col8a2P25318 Pdzk1ip1-202ENSMUST00000106548 887 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
Col8a2P25318 Cryzl1-202ENSMUST00000114023 1154 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Col8a2P25318 Gm12948-201ENSMUST00000119406 682 ntBASIC8.81□□□□□ -1
Col8a2P25318 Gm6500-201ENSMUST00000119412 451 ntBASIC8.81□□□□□ -1
Col8a2P25318 Snrnp25-202ENSMUST00000121182 659 ntAPPRIS ALT2 TSL 3 BASIC8.81□□□□□ -1
Col8a2P25318 Mir1896-201ENSMUST00000122641 81 ntBASIC8.81□□□□□ -1
Col8a2P25318 Cryzl1-206ENSMUST00000124282 1187 ntTSL 5 BASIC8.81□□□□□ -1
Col8a2P25318 4930502E09Rik-201ENSMUST00000126016 755 ntTSL 1 (best) BASIC8.81□□□□□ -1
Col8a2P25318 Gm15287-201ENSMUST00000132564 751 ntTSL 2 BASIC8.81□□□□□ -1
Col8a2P25318 Gm16048-201ENSMUST00000134250 663 ntTSL 3 BASIC8.81□□□□□ -1
Col8a2P25318 Gm5860-201ENSMUST00000137810 1028 ntTSL 2 BASIC8.81□□□□□ -1
Col8a2P25318 Gm11915-201ENSMUST00000153669 358 ntTSL 5 BASIC8.81□□□□□ -1
Col8a2P25318 Gm24954-201ENSMUST00000178831 110 ntBASIC8.81□□□□□ -1
Col8a2P25318 Gm26906-201ENSMUST00000180523 1228 ntTSL 5 BASIC8.81□□□□□ -1
Col8a2P25318 Map1lc3b-205ENSMUST00000181948 766 ntTSL 2 BASIC8.81□□□□□ -1
Col8a2P25318 Gm26943-201ENSMUST00000182295 957 ntBASIC8.81□□□□□ -1
Col8a2P25318 Gm5274-201ENSMUST00000182641 1003 ntBASIC8.81□□□□□ -1
Col8a2P25318 Gm28651-201ENSMUST00000185335 644 ntTSL 3 BASIC8.81□□□□□ -1
Col8a2P25318 Tex35-206ENSMUST00000187546 856 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
Col8a2P25318 Gm29595-202ENSMUST00000187954 466 ntTSL 3 BASIC8.81□□□□□ -1
Col8a2P25318 Gm29157-201ENSMUST00000188753 612 ntBASIC8.81□□□□□ -1
Col8a2P25318 1700020A23Rik-203ENSMUST00000189961 541 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
Col8a2P25318 1700081H04Rik-201ENSMUST00000190550 1128 ntTSL 1 (best) BASIC8.81□□□□□ -1
Col8a2P25318 Gm4430-202ENSMUST00000193902 1041 ntBASIC8.81□□□□□ -1
Col8a2P25318 A830092H15Rik-202ENSMUST00000195446 649 ntTSL 3 BASIC8.81□□□□□ -1
Col8a2P25318 Gm42493-201ENSMUST00000197559 1121 ntTSL 1 (best) BASIC8.81□□□□□ -1
Col8a2P25318 Nme6-214ENSMUST00000200468 865 ntAPPRIS P1 TSL 2 BASIC8.81□□□□□ -1
Col8a2P25318 Gm45094-201ENSMUST00000207013 617 ntBASIC8.81□□□□□ -1
Col8a2P25318 Gm7192-201ENSMUST00000210793 1137 ntBASIC8.81□□□□□ -1
Col8a2P25318 Gm19640-201ENSMUST00000214849 464 ntBASIC8.81□□□□□ -1
Col8a2P25318 Gm34983-202ENSMUST00000220432 494 ntTSL 3 BASIC8.81□□□□□ -1
Col8a2P25318 Eef1akmt1-201ENSMUST00000022518 880 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Col8a2P25318 Pla2g1b-201ENSMUST00000031495 557 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Col8a2P25318 Gm4763-201ENSMUST00000081657 882 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Col8a2P25318 2310016G11Rik-201ENSMUST00000094460 992 ntTSL 1 (best) BASIC8.81□□□□□ -1
Col8a2P25318 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Col8a2P25318 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Col8a2P25318 AC122382.1-201ENSMUST00000225869 2371 ntBASIC8.81□□□□□ -1
Col8a2P25318 Lrrc28-202ENSMUST00000053950 2923 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Col8a2P25318 Gpm6b-207ENSMUST00000112229 3203 ntAPPRIS ALT1 TSL 1 (best) BASIC8.81□□□□□ -1
Col8a2P25318 Mtmr7-205ENSMUST00000174205 2679 ntTSL 1 (best) BASIC8.81□□□□□ -1
Col8a2P25318 Xab2-201ENSMUST00000019614 2677 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Col8a2P25318 4932438H23Rik-201ENSMUST00000035689 2684 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Col8a2P25318 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms