Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Gm21076-201ENSMUST00000191597 696 ntBASIC10.71□□□□□ -0.69
Col4a6B1AVK5 Gm21672-201ENSMUST00000191609 696 ntBASIC10.71□□□□□ -0.69
Col4a6B1AVK5 Gm21791-201ENSMUST00000191631 696 ntBASIC10.71□□□□□ -0.69
Col4a6B1AVK5 Gm31186-201ENSMUST00000191786 696 ntBASIC10.71□□□□□ -0.69
Col4a6B1AVK5 Gm21065-201ENSMUST00000191793 696 ntBASIC10.71□□□□□ -0.69
Col4a6B1AVK5 Gm21845-201ENSMUST00000191848 696 ntBASIC10.71□□□□□ -0.69
Col4a6B1AVK5 Gm20840-201ENSMUST00000192165 696 ntBASIC10.71□□□□□ -0.69
Col4a6B1AVK5 Gm21469-201ENSMUST00000193164 696 ntBASIC10.71□□□□□ -0.69
Col4a6B1AVK5 Gm21427-201ENSMUST00000193270 696 ntBASIC10.71□□□□□ -0.69
Col4a6B1AVK5 Gm35955-201ENSMUST00000193437 696 ntBASIC10.71□□□□□ -0.69
Col4a6B1AVK5 Gm31335-201ENSMUST00000193949 693 ntBASIC10.71□□□□□ -0.69
Col4a6B1AVK5 Gm20925-201ENSMUST00000193967 696 ntBASIC10.71□□□□□ -0.69
Col4a6B1AVK5 Gm33112-201ENSMUST00000193971 699 ntBASIC10.71□□□□□ -0.69
Col4a6B1AVK5 Gm21661-201ENSMUST00000194101 696 ntBASIC10.71□□□□□ -0.69
Col4a6B1AVK5 Gm21412-201ENSMUST00000194618 696 ntBASIC10.71□□□□□ -0.69
Col4a6B1AVK5 Gm38016-201ENSMUST00000194806 693 ntBASIC10.71□□□□□ -0.69
Col4a6B1AVK5 Gm21763-201ENSMUST00000195140 696 ntBASIC10.71□□□□□ -0.69
Col4a6B1AVK5 Gm21890-201ENSMUST00000195190 696 ntBASIC10.71□□□□□ -0.69
Col4a6B1AVK5 Gm21350-201ENSMUST00000195678 696 ntBASIC10.71□□□□□ -0.69
Col4a6B1AVK5 Gm5684-201ENSMUST00000198419 961 ntBASIC10.71□□□□□ -0.69
Col4a6B1AVK5 Gm44920-201ENSMUST00000206503 746 ntTSL 5 BASIC10.71□□□□□ -0.69
Col4a6B1AVK5 Gm44649-202ENSMUST00000206896 635 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Col4a6B1AVK5 AC161374.2-201ENSMUST00000223662 596 ntBASIC10.71□□□□□ -0.69
Col4a6B1AVK5 Zfp389-202ENSMUST00000224437 1234 ntBASIC10.71□□□□□ -0.69
Col4a6B1AVK5 Crygc-201ENSMUST00000027089 783 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Col4a6B1AVK5 Zfp640-201ENSMUST00000071320 894 ntTSL 5 BASIC10.71□□□□□ -0.69
Col4a6B1AVK5 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Col4a6B1AVK5 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Col4a6B1AVK5 Ttll2-201ENSMUST00000115747 1623 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Col4a6B1AVK5 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Col4a6B1AVK5 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Col4a6B1AVK5 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Col4a6B1AVK5 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Col4a6B1AVK5 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Col4a6B1AVK5 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.7
Col4a6B1AVK5 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Col4a6B1AVK5 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.7
Col4a6B1AVK5 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Col4a6B1AVK5 Gm14735-201ENSMUST00000121772 3088 ntBASIC10.71□□□□□ -0.7
Col4a6B1AVK5 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Col4a6B1AVK5 Gm42527-201ENSMUST00000198173 1480 ntBASIC10.71□□□□□ -0.7
Col4a6B1AVK5 Serpina5-201ENSMUST00000021495 2162 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Col4a6B1AVK5 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Col4a6B1AVK5 Tmprss7-201ENSMUST00000114562 2587 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Col4a6B1AVK5 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Col4a6B1AVK5 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Col4a6B1AVK5 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Col4a6B1AVK5 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Col4a6B1AVK5 Il24-201ENSMUST00000121040 1159 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Col4a6B1AVK5 Gm14323-201ENSMUST00000122418 627 ntBASIC10.7□□□□□ -0.7
Col4a6B1AVK5 Gm11947-201ENSMUST00000125275 273 ntTSL 3 BASIC10.7□□□□□ -0.7
Col4a6B1AVK5 Pcsk2os1-202ENSMUST00000156780 527 ntTSL 3 BASIC10.7□□□□□ -0.7
Col4a6B1AVK5 Gm5561-201ENSMUST00000178932 480 ntBASIC10.7□□□□□ -0.7
Col4a6B1AVK5 Gm37804-201ENSMUST00000192206 547 ntTSL 5 BASIC10.7□□□□□ -0.7
Col4a6B1AVK5 Gm35298-201ENSMUST00000222719 430 ntTSL 5 BASIC10.7□□□□□ -0.7
Col4a6B1AVK5 AC124484.1-201ENSMUST00000223212 652 ntBASIC10.7□□□□□ -0.7
Col4a6B1AVK5 CT025603.2-201ENSMUST00000224369 484 ntBASIC10.7□□□□□ -0.7
Col4a6B1AVK5 Cenph-201ENSMUST00000075550 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Col4a6B1AVK5 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Col4a6B1AVK5 Mbnl2-204ENSMUST00000227012 2390 ntBASIC10.7□□□□□ -0.7
Col4a6B1AVK5 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Col4a6B1AVK5 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Col4a6B1AVK5 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Col4a6B1AVK5 Gm8752-201ENSMUST00000173427 1694 ntBASIC10.7□□□□□ -0.7
Col4a6B1AVK5 Dcstamp-205ENSMUST00000228556 1684 ntBASIC10.7□□□□□ -0.7
Col4a6B1AVK5 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Col4a6B1AVK5 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Col4a6B1AVK5 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Col4a6B1AVK5 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Col4a6B1AVK5 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Col4a6B1AVK5 Gm19114-201ENSMUST00000193972 1357 ntBASIC10.7□□□□□ -0.7
Col4a6B1AVK5 Dcstamp-204ENSMUST00000227792 1367 ntBASIC10.7□□□□□ -0.7
Col4a6B1AVK5 Abi1-206ENSMUST00000126112 3360 ntAPPRIS ALT1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Col4a6B1AVK5 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Col4a6B1AVK5 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC10.7□□□□□ -0.7
Col4a6B1AVK5 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Col4a6B1AVK5 Stox2-206ENSMUST00000210030 2734 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Col4a6B1AVK5 Gm28578-203ENSMUST00000189196 1470 ntTSL 5 BASIC10.7□□□□□ -0.7
Col4a6B1AVK5 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Col4a6B1AVK5 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Col4a6B1AVK5 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC10.7□□□□□ -0.7
Col4a6B1AVK5 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Col4a6B1AVK5 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Col4a6B1AVK5 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Col4a6B1AVK5 Phactr1-214ENSMUST00000149235 2076 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Col4a6B1AVK5 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Col4a6B1AVK5 Gm4846-201ENSMUST00000143922 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Col4a6B1AVK5 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Col4a6B1AVK5 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Col4a6B1AVK5 Ttll9-201ENSMUST00000099197 1797 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Col4a6B1AVK5 Ighv6-3-201ENSMUST00000103486 356 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Col4a6B1AVK5 Ighv6-6-201ENSMUST00000103489 357 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Col4a6B1AVK5 Gm12072-201ENSMUST00000118293 715 ntBASIC10.69□□□□□ -0.7
Col4a6B1AVK5 H2afb2-201ENSMUST00000118616 348 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Col4a6B1AVK5 Gm14828-201ENSMUST00000119381 1155 ntBASIC10.69□□□□□ -0.7
Col4a6B1AVK5 Gm15641-201ENSMUST00000161407 670 ntTSL 3 BASIC10.69□□□□□ -0.7
Col4a6B1AVK5 Gm6633-201ENSMUST00000173851 270 ntBASIC10.69□□□□□ -0.7
Col4a6B1AVK5 Gm10318-201ENSMUST00000186874 930 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Col4a6B1AVK5 Gm44658-201ENSMUST00000207965 637 ntBASIC10.69□□□□□ -0.7
Col4a6B1AVK5 Rce1-203ENSMUST00000224707 1255 ntBASIC10.69□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms