Protein–RNA interactions for Protein: S4R2D1

Gm5493, Predicted gene 5493, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5493S4R2D1 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Gm5493S4R2D1 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Gm5493S4R2D1 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Gm5493S4R2D1 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Gm5493S4R2D1 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Gm5493S4R2D1 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Gm5493S4R2D1 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Gm5493S4R2D1 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Gm5493S4R2D1 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Gm5493S4R2D1 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Gm5493S4R2D1 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Gm5493S4R2D1 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC16.86■□□□□ 0.29
Gm5493S4R2D1 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Gm5493S4R2D1 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Gm5493S4R2D1 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Gm5493S4R2D1 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Gm5493S4R2D1 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Gm5493S4R2D1 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gm5493S4R2D1 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gm5493S4R2D1 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC16.85■□□□□ 0.29
Gm5493S4R2D1 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gm5493S4R2D1 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Gm5493S4R2D1 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gm5493S4R2D1 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gm5493S4R2D1 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gm5493S4R2D1 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gm5493S4R2D1 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC16.84■□□□□ 0.29
Gm5493S4R2D1 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Gm5493S4R2D1 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gm5493S4R2D1 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Gm5493S4R2D1 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gm5493S4R2D1 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gm5493S4R2D1 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Gm5493S4R2D1 Gm43182-201ENSMUST00000199476 2528 ntBASIC16.84■□□□□ 0.29
Gm5493S4R2D1 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Gm5493S4R2D1 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
Gm5493S4R2D1 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Gm5493S4R2D1 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Gm5493S4R2D1 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Gm5493S4R2D1 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC16.83■□□□□ 0.28
Gm5493S4R2D1 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Gm5493S4R2D1 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm5493S4R2D1 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm5493S4R2D1 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm5493S4R2D1 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm5493S4R2D1 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm5493S4R2D1 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm5493S4R2D1 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm5493S4R2D1 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC16.82■□□□□ 0.28
Gm5493S4R2D1 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm5493S4R2D1 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Gm5493S4R2D1 Gm6311-201ENSMUST00000073790 878 ntBASIC16.82■□□□□ 0.28
Gm5493S4R2D1 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm5493S4R2D1 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Gm5493S4R2D1 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm5493S4R2D1 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm5493S4R2D1 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm5493S4R2D1 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Gm5493S4R2D1 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC16.81■□□□□ 0.28
Gm5493S4R2D1 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm5493S4R2D1 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm5493S4R2D1 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC16.81■□□□□ 0.28
Gm5493S4R2D1 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Gm5493S4R2D1 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm5493S4R2D1 Hsf1-204ENSMUST00000226872 2104 ntBASIC16.81■□□□□ 0.28
Gm5493S4R2D1 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm5493S4R2D1 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm5493S4R2D1 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm5493S4R2D1 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm5493S4R2D1 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm5493S4R2D1 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm5493S4R2D1 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm5493S4R2D1 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Gm5493S4R2D1 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm5493S4R2D1 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Gm5493S4R2D1 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC16.8■□□□□ 0.28
Gm5493S4R2D1 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC16.8■□□□□ 0.28
Gm5493S4R2D1 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm5493S4R2D1 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm5493S4R2D1 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm5493S4R2D1 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.8■□□□□ 0.28
Gm5493S4R2D1 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm5493S4R2D1 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm5493S4R2D1 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC16.8■□□□□ 0.28
Gm5493S4R2D1 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gm5493S4R2D1 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gm5493S4R2D1 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gm5493S4R2D1 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Gm5493S4R2D1 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gm5493S4R2D1 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Gm5493S4R2D1 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gm5493S4R2D1 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Gm5493S4R2D1 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gm5493S4R2D1 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Gm5493S4R2D1 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gm5493S4R2D1 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gm5493S4R2D1 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC16.78■□□□□ 0.28
Gm5493S4R2D1 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gm5493S4R2D1 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Gm5493S4R2D1 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms