Protein–RNA interactions for Protein: Q9Z262

Cldn6, Claudin-6, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn6Q9Z262 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cldn6Q9Z262 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cldn6Q9Z262 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cldn6Q9Z262 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cldn6Q9Z262 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cldn6Q9Z262 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Cldn6Q9Z262 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Cldn6Q9Z262 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.68■□□□□ 0.58
Cldn6Q9Z262 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cldn6Q9Z262 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cldn6Q9Z262 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cldn6Q9Z262 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Cldn6Q9Z262 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC18.68■□□□□ 0.58
Cldn6Q9Z262 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cldn6Q9Z262 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.68■□□□□ 0.58
Cldn6Q9Z262 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cldn6Q9Z262 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cldn6Q9Z262 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Cldn6Q9Z262 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Cldn6Q9Z262 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC18.67■□□□□ 0.58
Cldn6Q9Z262 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cldn6Q9Z262 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Cldn6Q9Z262 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cldn6Q9Z262 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cldn6Q9Z262 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cldn6Q9Z262 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cldn6Q9Z262 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cldn6Q9Z262 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cldn6Q9Z262 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cldn6Q9Z262 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Cldn6Q9Z262 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cldn6Q9Z262 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cldn6Q9Z262 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cldn6Q9Z262 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Cldn6Q9Z262 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cldn6Q9Z262 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Cldn6Q9Z262 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cldn6Q9Z262 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cldn6Q9Z262 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cldn6Q9Z262 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Cldn6Q9Z262 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC18.65■□□□□ 0.58
Cldn6Q9Z262 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC18.65■□□□□ 0.58
Cldn6Q9Z262 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cldn6Q9Z262 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cldn6Q9Z262 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cldn6Q9Z262 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cldn6Q9Z262 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cldn6Q9Z262 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cldn6Q9Z262 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cldn6Q9Z262 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC18.64■□□□□ 0.58
Cldn6Q9Z262 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Cldn6Q9Z262 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Cldn6Q9Z262 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cldn6Q9Z262 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Cldn6Q9Z262 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.64■□□□□ 0.57
Cldn6Q9Z262 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cldn6Q9Z262 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cldn6Q9Z262 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cldn6Q9Z262 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Cldn6Q9Z262 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cldn6Q9Z262 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cldn6Q9Z262 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Cldn6Q9Z262 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cldn6Q9Z262 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cldn6Q9Z262 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC18.64■□□□□ 0.57
Cldn6Q9Z262 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Cldn6Q9Z262 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cldn6Q9Z262 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cldn6Q9Z262 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.63■□□□□ 0.57
Cldn6Q9Z262 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cldn6Q9Z262 Notumos-201ENSMUST00000151998 2659 ntBASIC18.63■□□□□ 0.57
Cldn6Q9Z262 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
Cldn6Q9Z262 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC18.63■□□□□ 0.57
Cldn6Q9Z262 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cldn6Q9Z262 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Cldn6Q9Z262 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cldn6Q9Z262 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cldn6Q9Z262 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cldn6Q9Z262 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cldn6Q9Z262 Gm8770-201ENSMUST00000121113 1109 ntBASIC18.62■□□□□ 0.57
Cldn6Q9Z262 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC18.62■□□□□ 0.57
Cldn6Q9Z262 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cldn6Q9Z262 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cldn6Q9Z262 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Cldn6Q9Z262 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.62■□□□□ 0.57
Cldn6Q9Z262 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cldn6Q9Z262 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Cldn6Q9Z262 Gm12922-201ENSMUST00000120626 809 ntBASIC18.61■□□□□ 0.57
Cldn6Q9Z262 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC18.61■□□□□ 0.57
Cldn6Q9Z262 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC18.61■□□□□ 0.57
Cldn6Q9Z262 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cldn6Q9Z262 Golgb1-201ENSMUST00000023534 498 ntBASIC18.61■□□□□ 0.57
Cldn6Q9Z262 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cldn6Q9Z262 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cldn6Q9Z262 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cldn6Q9Z262 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cldn6Q9Z262 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cldn6Q9Z262 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cldn6Q9Z262 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cldn6Q9Z262 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms