Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
ClcnkaQ9WUB7 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.3■□□□□ 0.52
ClcnkaQ9WUB7 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ClcnkaQ9WUB7 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ClcnkaQ9WUB7 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ClcnkaQ9WUB7 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ClcnkaQ9WUB7 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ClcnkaQ9WUB7 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.29■□□□□ 0.52
ClcnkaQ9WUB7 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
ClcnkaQ9WUB7 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ClcnkaQ9WUB7 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ClcnkaQ9WUB7 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC18.29■□□□□ 0.52
ClcnkaQ9WUB7 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ClcnkaQ9WUB7 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC18.29■□□□□ 0.52
ClcnkaQ9WUB7 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
ClcnkaQ9WUB7 Gm43530-201ENSMUST00000195920 274 ntBASIC18.29■□□□□ 0.52
ClcnkaQ9WUB7 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ClcnkaQ9WUB7 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
ClcnkaQ9WUB7 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ClcnkaQ9WUB7 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ClcnkaQ9WUB7 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ClcnkaQ9WUB7 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ClcnkaQ9WUB7 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC18.28■□□□□ 0.52
ClcnkaQ9WUB7 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ClcnkaQ9WUB7 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ClcnkaQ9WUB7 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ClcnkaQ9WUB7 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC18.28■□□□□ 0.52
ClcnkaQ9WUB7 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ClcnkaQ9WUB7 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ClcnkaQ9WUB7 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ClcnkaQ9WUB7 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ClcnkaQ9WUB7 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ClcnkaQ9WUB7 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ClcnkaQ9WUB7 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
ClcnkaQ9WUB7 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
ClcnkaQ9WUB7 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
ClcnkaQ9WUB7 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
ClcnkaQ9WUB7 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC18.27■□□□□ 0.52
ClcnkaQ9WUB7 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC18.27■□□□□ 0.52
ClcnkaQ9WUB7 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC18.27■□□□□ 0.52
ClcnkaQ9WUB7 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC18.27■□□□□ 0.52
ClcnkaQ9WUB7 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.27■□□□□ 0.52
ClcnkaQ9WUB7 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
ClcnkaQ9WUB7 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
ClcnkaQ9WUB7 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
ClcnkaQ9WUB7 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
ClcnkaQ9WUB7 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
ClcnkaQ9WUB7 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
ClcnkaQ9WUB7 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
ClcnkaQ9WUB7 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
ClcnkaQ9WUB7 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
ClcnkaQ9WUB7 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ClcnkaQ9WUB7 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
ClcnkaQ9WUB7 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
ClcnkaQ9WUB7 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ClcnkaQ9WUB7 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ClcnkaQ9WUB7 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
ClcnkaQ9WUB7 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ClcnkaQ9WUB7 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ClcnkaQ9WUB7 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ClcnkaQ9WUB7 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ClcnkaQ9WUB7 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ClcnkaQ9WUB7 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ClcnkaQ9WUB7 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
ClcnkaQ9WUB7 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ClcnkaQ9WUB7 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ClcnkaQ9WUB7 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ClcnkaQ9WUB7 Gm12922-201ENSMUST00000120626 809 ntBASIC18.25■□□□□ 0.51
ClcnkaQ9WUB7 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ClcnkaQ9WUB7 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
ClcnkaQ9WUB7 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ClcnkaQ9WUB7 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ClcnkaQ9WUB7 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
ClcnkaQ9WUB7 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ClcnkaQ9WUB7 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
ClcnkaQ9WUB7 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ClcnkaQ9WUB7 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ClcnkaQ9WUB7 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
ClcnkaQ9WUB7 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
ClcnkaQ9WUB7 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ClcnkaQ9WUB7 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC18.24■□□□□ 0.51
ClcnkaQ9WUB7 Krt8-ps-201ENSMUST00000208495 945 ntBASIC18.24■□□□□ 0.51
ClcnkaQ9WUB7 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ClcnkaQ9WUB7 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
ClcnkaQ9WUB7 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ClcnkaQ9WUB7 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
ClcnkaQ9WUB7 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.23■□□□□ 0.51
ClcnkaQ9WUB7 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ClcnkaQ9WUB7 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC18.23■□□□□ 0.51
ClcnkaQ9WUB7 Golgb1-201ENSMUST00000023534 498 ntBASIC18.23■□□□□ 0.51
ClcnkaQ9WUB7 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ClcnkaQ9WUB7 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ClcnkaQ9WUB7 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ClcnkaQ9WUB7 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ClcnkaQ9WUB7 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ClcnkaQ9WUB7 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ClcnkaQ9WUB7 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
ClcnkaQ9WUB7 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ClcnkaQ9WUB7 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC18.22■□□□□ 0.51
ClcnkaQ9WUB7 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms