Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Cdh17Q9R100 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
Cdh17Q9R100 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cdh17Q9R100 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Cdh17Q9R100 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cdh17Q9R100 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cdh17Q9R100 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cdh17Q9R100 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cdh17Q9R100 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.45■□□□□ 0.7
Cdh17Q9R100 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC19.45■□□□□ 0.7
Cdh17Q9R100 Mir6236-201ENSMUST00000184437 123 ntBASIC19.45■□□□□ 0.7
Cdh17Q9R100 Gm5522-201ENSMUST00000189483 1242 ntBASIC19.45■□□□□ 0.7
Cdh17Q9R100 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.45■□□□□ 0.7
Cdh17Q9R100 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cdh17Q9R100 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cdh17Q9R100 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Cdh17Q9R100 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Cdh17Q9R100 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cdh17Q9R100 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Cdh17Q9R100 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cdh17Q9R100 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cdh17Q9R100 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cdh17Q9R100 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Cdh17Q9R100 Gm10657-201ENSMUST00000193528 1031 ntBASIC19.44■□□□□ 0.7
Cdh17Q9R100 Gm42501-201ENSMUST00000200220 1026 ntBASIC19.44■□□□□ 0.7
Cdh17Q9R100 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Cdh17Q9R100 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Cdh17Q9R100 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Cdh17Q9R100 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Cdh17Q9R100 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cdh17Q9R100 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Cdh17Q9R100 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Cdh17Q9R100 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Cdh17Q9R100 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cdh17Q9R100 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Cdh17Q9R100 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cdh17Q9R100 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cdh17Q9R100 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.43■□□□□ 0.7
Cdh17Q9R100 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cdh17Q9R100 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cdh17Q9R100 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cdh17Q9R100 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Cdh17Q9R100 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.42■□□□□ 0.7
Cdh17Q9R100 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Cdh17Q9R100 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.42■□□□□ 0.7
Cdh17Q9R100 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC19.42■□□□□ 0.7
Cdh17Q9R100 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.42■□□□□ 0.7
Cdh17Q9R100 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cdh17Q9R100 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Cdh17Q9R100 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Cdh17Q9R100 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cdh17Q9R100 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cdh17Q9R100 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cdh17Q9R100 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Cdh17Q9R100 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC19.42■□□□□ 0.7
Cdh17Q9R100 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cdh17Q9R100 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cdh17Q9R100 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC19.41■□□□□ 0.7
Cdh17Q9R100 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Cdh17Q9R100 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cdh17Q9R100 Gm5812-201ENSMUST00000061073 957 ntBASIC19.41■□□□□ 0.7
Cdh17Q9R100 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Cdh17Q9R100 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Cdh17Q9R100 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cdh17Q9R100 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cdh17Q9R100 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
Cdh17Q9R100 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cdh17Q9R100 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Cdh17Q9R100 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Cdh17Q9R100 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.4■□□□□ 0.7
Cdh17Q9R100 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cdh17Q9R100 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.4■□□□□ 0.7
Cdh17Q9R100 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.4■□□□□ 0.7
Cdh17Q9R100 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.39■□□□□ 0.7
Cdh17Q9R100 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Cdh17Q9R100 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cdh17Q9R100 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cdh17Q9R100 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cdh17Q9R100 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cdh17Q9R100 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cdh17Q9R100 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Cdh17Q9R100 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Cdh17Q9R100 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Cdh17Q9R100 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cdh17Q9R100 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Cdh17Q9R100 Gm7417-201ENSMUST00000192950 473 ntBASIC19.38■□□□□ 0.69
Cdh17Q9R100 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Cdh17Q9R100 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cdh17Q9R100 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cdh17Q9R100 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cdh17Q9R100 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cdh17Q9R100 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cdh17Q9R100 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Cdh17Q9R100 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cdh17Q9R100 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cdh17Q9R100 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cdh17Q9R100 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cdh17Q9R100 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Cdh17Q9R100 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Cdh17Q9R100 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms