Protein–RNA interactions for Protein: Q9R0A1

Clcn2, Chloride channel protein 2, mousemouse

Predictions only

Length 908 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn2Q9R0A1 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Clcn2Q9R0A1 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Clcn2Q9R0A1 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Clcn2Q9R0A1 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Clcn2Q9R0A1 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Clcn2Q9R0A1 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Clcn2Q9R0A1 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Clcn2Q9R0A1 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Clcn2Q9R0A1 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Clcn2Q9R0A1 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Clcn2Q9R0A1 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Clcn2Q9R0A1 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Clcn2Q9R0A1 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Clcn2Q9R0A1 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Clcn2Q9R0A1 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
Clcn2Q9R0A1 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Clcn2Q9R0A1 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Clcn2Q9R0A1 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Clcn2Q9R0A1 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.32■□□□□ 0.84
Clcn2Q9R0A1 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Clcn2Q9R0A1 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Clcn2Q9R0A1 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Clcn2Q9R0A1 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Clcn2Q9R0A1 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Clcn2Q9R0A1 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Clcn2Q9R0A1 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Clcn2Q9R0A1 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Clcn2Q9R0A1 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Clcn2Q9R0A1 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Clcn2Q9R0A1 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.3■□□□□ 0.84
Clcn2Q9R0A1 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC20.3■□□□□ 0.84
Clcn2Q9R0A1 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Clcn2Q9R0A1 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.3■□□□□ 0.84
Clcn2Q9R0A1 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Clcn2Q9R0A1 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Clcn2Q9R0A1 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Clcn2Q9R0A1 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Clcn2Q9R0A1 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC20.29■□□□□ 0.84
Clcn2Q9R0A1 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Clcn2Q9R0A1 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Clcn2Q9R0A1 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Clcn2Q9R0A1 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Clcn2Q9R0A1 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Clcn2Q9R0A1 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Clcn2Q9R0A1 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Clcn2Q9R0A1 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Clcn2Q9R0A1 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Clcn2Q9R0A1 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC20.28■□□□□ 0.84
Clcn2Q9R0A1 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Clcn2Q9R0A1 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Clcn2Q9R0A1 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Clcn2Q9R0A1 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Clcn2Q9R0A1 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Clcn2Q9R0A1 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Clcn2Q9R0A1 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Clcn2Q9R0A1 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Clcn2Q9R0A1 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Clcn2Q9R0A1 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Clcn2Q9R0A1 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Clcn2Q9R0A1 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Clcn2Q9R0A1 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Clcn2Q9R0A1 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Clcn2Q9R0A1 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Clcn2Q9R0A1 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Clcn2Q9R0A1 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Clcn2Q9R0A1 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Clcn2Q9R0A1 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Clcn2Q9R0A1 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Clcn2Q9R0A1 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Clcn2Q9R0A1 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Clcn2Q9R0A1 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Clcn2Q9R0A1 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Clcn2Q9R0A1 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Clcn2Q9R0A1 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Clcn2Q9R0A1 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Clcn2Q9R0A1 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Clcn2Q9R0A1 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Clcn2Q9R0A1 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Clcn2Q9R0A1 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.25■□□□□ 0.83
Clcn2Q9R0A1 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Clcn2Q9R0A1 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Clcn2Q9R0A1 Gm5112-201ENSMUST00000204407 2368 ntBASIC20.25■□□□□ 0.83
Clcn2Q9R0A1 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Clcn2Q9R0A1 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Clcn2Q9R0A1 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Clcn2Q9R0A1 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Clcn2Q9R0A1 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Clcn2Q9R0A1 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Clcn2Q9R0A1 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Clcn2Q9R0A1 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Clcn2Q9R0A1 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Clcn2Q9R0A1 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Clcn2Q9R0A1 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Clcn2Q9R0A1 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Clcn2Q9R0A1 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Clcn2Q9R0A1 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Clcn2Q9R0A1 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC20.23■□□□□ 0.83
Clcn2Q9R0A1 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC20.23■□□□□ 0.83
Clcn2Q9R0A1 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC20.23■□□□□ 0.83
Clcn2Q9R0A1 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.23■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms