Protein–RNA interactions for Protein: Q9JJI8

Rpl38, 60S ribosomal protein L38, mousemouse

Known RBP Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl38Q9JJI8 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rpl38Q9JJI8 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rpl38Q9JJI8 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rpl38Q9JJI8 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rpl38Q9JJI8 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rpl38Q9JJI8 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC19.2■□□□□ 0.66
Rpl38Q9JJI8 Gm15820-201ENSMUST00000201566 728 ntBASIC19.2■□□□□ 0.66
Rpl38Q9JJI8 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rpl38Q9JJI8 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rpl38Q9JJI8 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rpl38Q9JJI8 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.19■□□□□ 0.66
Rpl38Q9JJI8 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rpl38Q9JJI8 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Rpl38Q9JJI8 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rpl38Q9JJI8 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC19.19■□□□□ 0.66
Rpl38Q9JJI8 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rpl38Q9JJI8 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Rpl38Q9JJI8 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rpl38Q9JJI8 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rpl38Q9JJI8 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Rpl38Q9JJI8 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Rpl38Q9JJI8 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Rpl38Q9JJI8 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Rpl38Q9JJI8 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rpl38Q9JJI8 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rpl38Q9JJI8 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Rpl38Q9JJI8 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Rpl38Q9JJI8 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.18■□□□□ 0.66
Rpl38Q9JJI8 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rpl38Q9JJI8 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Rpl38Q9JJI8 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rpl38Q9JJI8 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Rpl38Q9JJI8 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.17■□□□□ 0.66
Rpl38Q9JJI8 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.17■□□□□ 0.66
Rpl38Q9JJI8 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC19.17■□□□□ 0.66
Rpl38Q9JJI8 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rpl38Q9JJI8 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rpl38Q9JJI8 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rpl38Q9JJI8 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rpl38Q9JJI8 Iqck-206ENSMUST00000208658 2891 ntBASIC19.16■□□□□ 0.66
Rpl38Q9JJI8 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.16■□□□□ 0.66
Rpl38Q9JJI8 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rpl38Q9JJI8 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rpl38Q9JJI8 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Rpl38Q9JJI8 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.16■□□□□ 0.66
Rpl38Q9JJI8 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rpl38Q9JJI8 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
Rpl38Q9JJI8 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Rpl38Q9JJI8 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rpl38Q9JJI8 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Rpl38Q9JJI8 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rpl38Q9JJI8 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rpl38Q9JJI8 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC19.15■□□□□ 0.66
Rpl38Q9JJI8 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Rpl38Q9JJI8 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Rpl38Q9JJI8 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Rpl38Q9JJI8 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.14■□□□□ 0.65
Rpl38Q9JJI8 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rpl38Q9JJI8 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rpl38Q9JJI8 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.14■□□□□ 0.65
Rpl38Q9JJI8 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Rpl38Q9JJI8 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rpl38Q9JJI8 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rpl38Q9JJI8 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Rpl38Q9JJI8 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rpl38Q9JJI8 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Rpl38Q9JJI8 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rpl38Q9JJI8 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rpl38Q9JJI8 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rpl38Q9JJI8 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rpl38Q9JJI8 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rpl38Q9JJI8 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rpl38Q9JJI8 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Rpl38Q9JJI8 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC19.13■□□□□ 0.65
Rpl38Q9JJI8 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Rpl38Q9JJI8 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
Rpl38Q9JJI8 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Rpl38Q9JJI8 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Rpl38Q9JJI8 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.12■□□□□ 0.65
Rpl38Q9JJI8 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Rpl38Q9JJI8 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rpl38Q9JJI8 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Rpl38Q9JJI8 Gm5522-201ENSMUST00000189483 1242 ntBASIC19.12■□□□□ 0.65
Rpl38Q9JJI8 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC19.12■□□□□ 0.65
Rpl38Q9JJI8 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rpl38Q9JJI8 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.11■□□□□ 0.65
Rpl38Q9JJI8 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Rpl38Q9JJI8 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rpl38Q9JJI8 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rpl38Q9JJI8 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rpl38Q9JJI8 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rpl38Q9JJI8 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rpl38Q9JJI8 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rpl38Q9JJI8 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rpl38Q9JJI8 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rpl38Q9JJI8 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rpl38Q9JJI8 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rpl38Q9JJI8 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC19.1■□□□□ 0.65
Rpl38Q9JJI8 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rpl38Q9JJI8 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 14 ms