Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC23.85■■□□□ 1.41
Ube3bQ9ES34 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Ube3bQ9ES34 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC23.85■■□□□ 1.41
Ube3bQ9ES34 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
Ube3bQ9ES34 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Ube3bQ9ES34 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
Ube3bQ9ES34 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Ube3bQ9ES34 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC23.85■■□□□ 1.41
Ube3bQ9ES34 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Ube3bQ9ES34 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Ube3bQ9ES34 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Ube3bQ9ES34 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
Ube3bQ9ES34 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Ube3bQ9ES34 Gm43006-201ENSMUST00000197702 1602 ntBASIC23.82■■□□□ 1.4
Ube3bQ9ES34 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Ube3bQ9ES34 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC23.82■■□□□ 1.4
Ube3bQ9ES34 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Ube3bQ9ES34 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
Ube3bQ9ES34 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Ube3bQ9ES34 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Ube3bQ9ES34 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
Ube3bQ9ES34 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Ube3bQ9ES34 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Ube3bQ9ES34 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Ube3bQ9ES34 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Ube3bQ9ES34 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
Ube3bQ9ES34 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
Ube3bQ9ES34 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Ube3bQ9ES34 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Ube3bQ9ES34 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Ube3bQ9ES34 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Ube3bQ9ES34 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Ube3bQ9ES34 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Ube3bQ9ES34 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
Ube3bQ9ES34 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
Ube3bQ9ES34 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Ube3bQ9ES34 Gm43060-201ENSMUST00000200621 289 ntBASIC23.79■■□□□ 1.4
Ube3bQ9ES34 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
Ube3bQ9ES34 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Ube3bQ9ES34 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ube3bQ9ES34 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ube3bQ9ES34 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ube3bQ9ES34 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ube3bQ9ES34 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ube3bQ9ES34 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ube3bQ9ES34 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ube3bQ9ES34 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Ube3bQ9ES34 Gm40848-201ENSMUST00000221998 324 ntBASIC23.78■■□□□ 1.4
Ube3bQ9ES34 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ube3bQ9ES34 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Ube3bQ9ES34 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Ube3bQ9ES34 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Ube3bQ9ES34 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC23.78■■□□□ 1.4
Ube3bQ9ES34 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ube3bQ9ES34 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Ube3bQ9ES34 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC23.77■■□□□ 1.4
Ube3bQ9ES34 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC23.77■■□□□ 1.4
Ube3bQ9ES34 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC23.77■■□□□ 1.4
Ube3bQ9ES34 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Ube3bQ9ES34 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Ube3bQ9ES34 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
Ube3bQ9ES34 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Ube3bQ9ES34 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Ube3bQ9ES34 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
Ube3bQ9ES34 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Ube3bQ9ES34 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Ube3bQ9ES34 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Ube3bQ9ES34 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ube3bQ9ES34 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ube3bQ9ES34 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC23.75■■□□□ 1.39
Ube3bQ9ES34 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC23.75■■□□□ 1.39
Ube3bQ9ES34 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ube3bQ9ES34 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ube3bQ9ES34 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ube3bQ9ES34 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ube3bQ9ES34 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC23.75■■□□□ 1.39
Ube3bQ9ES34 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ube3bQ9ES34 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ube3bQ9ES34 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ube3bQ9ES34 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Ube3bQ9ES34 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC23.74■■□□□ 1.39
Ube3bQ9ES34 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ube3bQ9ES34 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
Ube3bQ9ES34 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC23.74■■□□□ 1.39
Ube3bQ9ES34 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Ube3bQ9ES34 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
Ube3bQ9ES34 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC23.73■■□□□ 1.39
Ube3bQ9ES34 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Ube3bQ9ES34 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC23.73■■□□□ 1.39
Ube3bQ9ES34 Gm11421-201ENSMUST00000122124 294 ntBASIC23.73■■□□□ 1.39
Ube3bQ9ES34 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC23.73■■□□□ 1.39
Ube3bQ9ES34 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
Ube3bQ9ES34 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Ube3bQ9ES34 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Ube3bQ9ES34 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Ube3bQ9ES34 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Ube3bQ9ES34 Gm18284-201ENSMUST00000172604 624 ntBASIC23.72■■□□□ 1.39
Ube3bQ9ES34 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Ube3bQ9ES34 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Ube3bQ9ES34 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms