Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ube4bQ9ES00 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ube4bQ9ES00 Rarb-207ENSMUST00000225921 2756 ntBASIC19.04■□□□□ 0.64
Ube4bQ9ES00 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC19.03■□□□□ 0.64
Ube4bQ9ES00 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ube4bQ9ES00 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ube4bQ9ES00 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Ube4bQ9ES00 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ube4bQ9ES00 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ube4bQ9ES00 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ube4bQ9ES00 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Ube4bQ9ES00 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ube4bQ9ES00 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ube4bQ9ES00 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ube4bQ9ES00 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.03■□□□□ 0.64
Ube4bQ9ES00 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
Ube4bQ9ES00 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ube4bQ9ES00 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Ube4bQ9ES00 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
Ube4bQ9ES00 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC19.02■□□□□ 0.64
Ube4bQ9ES00 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ube4bQ9ES00 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ube4bQ9ES00 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
Ube4bQ9ES00 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ube4bQ9ES00 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ube4bQ9ES00 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Ube4bQ9ES00 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ube4bQ9ES00 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ube4bQ9ES00 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Ube4bQ9ES00 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Ube4bQ9ES00 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Ube4bQ9ES00 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ube4bQ9ES00 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ube4bQ9ES00 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ube4bQ9ES00 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC19.01■□□□□ 0.63
Ube4bQ9ES00 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ube4bQ9ES00 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC19.01■□□□□ 0.63
Ube4bQ9ES00 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ube4bQ9ES00 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ube4bQ9ES00 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ube4bQ9ES00 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC19■□□□□ 0.63
Ube4bQ9ES00 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ube4bQ9ES00 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ube4bQ9ES00 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Ube4bQ9ES00 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ube4bQ9ES00 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ube4bQ9ES00 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
Ube4bQ9ES00 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ube4bQ9ES00 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Ube4bQ9ES00 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Ube4bQ9ES00 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Ube4bQ9ES00 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ube4bQ9ES00 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.99■□□□□ 0.63
Ube4bQ9ES00 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Ube4bQ9ES00 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ube4bQ9ES00 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ube4bQ9ES00 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ube4bQ9ES00 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ube4bQ9ES00 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.99■□□□□ 0.63
Ube4bQ9ES00 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ube4bQ9ES00 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Ube4bQ9ES00 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC18.99■□□□□ 0.63
Ube4bQ9ES00 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ube4bQ9ES00 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ube4bQ9ES00 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ube4bQ9ES00 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ube4bQ9ES00 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ube4bQ9ES00 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ube4bQ9ES00 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ube4bQ9ES00 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC18.98■□□□□ 0.63
Ube4bQ9ES00 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Ube4bQ9ES00 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ube4bQ9ES00 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Ube4bQ9ES00 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.98■□□□□ 0.63
Ube4bQ9ES00 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
Ube4bQ9ES00 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ube4bQ9ES00 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Ube4bQ9ES00 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ube4bQ9ES00 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Ube4bQ9ES00 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ube4bQ9ES00 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ube4bQ9ES00 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ube4bQ9ES00 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ube4bQ9ES00 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ube4bQ9ES00 Gm14523-201ENSMUST00000117260 558 ntBASIC18.97■□□□□ 0.63
Ube4bQ9ES00 Mir6538-201ENSMUST00000183713 110 ntBASIC18.97■□□□□ 0.63
Ube4bQ9ES00 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ube4bQ9ES00 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ube4bQ9ES00 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ube4bQ9ES00 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ube4bQ9ES00 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Ube4bQ9ES00 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.96■□□□□ 0.63
Ube4bQ9ES00 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ube4bQ9ES00 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.96■□□□□ 0.63
Ube4bQ9ES00 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ube4bQ9ES00 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.96■□□□□ 0.63
Ube4bQ9ES00 Gm27502-201ENSMUST00000183495 199 ntBASIC18.96■□□□□ 0.63
Ube4bQ9ES00 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ube4bQ9ES00 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC18.96■□□□□ 0.63
Ube4bQ9ES00 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 147.4 ms