Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Upf1Q9EPU0 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Upf1Q9EPU0 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
Upf1Q9EPU0 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Upf1Q9EPU0 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Upf1Q9EPU0 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC23.19■■□□□ 1.3
Upf1Q9EPU0 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC23.19■■□□□ 1.3
Upf1Q9EPU0 Gm26524-201ENSMUST00000192339 390 ntBASIC23.19■■□□□ 1.3
Upf1Q9EPU0 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Upf1Q9EPU0 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Upf1Q9EPU0 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Upf1Q9EPU0 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Upf1Q9EPU0 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Upf1Q9EPU0 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
Upf1Q9EPU0 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC23.18■■□□□ 1.3
Upf1Q9EPU0 AC154649.1-201ENSMUST00000227392 384 ntBASIC23.18■■□□□ 1.3
Upf1Q9EPU0 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Upf1Q9EPU0 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
Upf1Q9EPU0 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Upf1Q9EPU0 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Upf1Q9EPU0 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Upf1Q9EPU0 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
Upf1Q9EPU0 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC23.17■■□□□ 1.3
Upf1Q9EPU0 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
Upf1Q9EPU0 Gm9484-201ENSMUST00000195892 1159 ntBASIC23.17■■□□□ 1.3
Upf1Q9EPU0 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Upf1Q9EPU0 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Upf1Q9EPU0 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Upf1Q9EPU0 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
Upf1Q9EPU0 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Upf1Q9EPU0 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Upf1Q9EPU0 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
Upf1Q9EPU0 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC23.15■■□□□ 1.3
Upf1Q9EPU0 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC23.15■■□□□ 1.3
Upf1Q9EPU0 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC23.15■■□□□ 1.3
Upf1Q9EPU0 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Upf1Q9EPU0 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC23.15■■□□□ 1.3
Upf1Q9EPU0 Rab3c-203ENSMUST00000224180 967 ntBASIC23.15■■□□□ 1.3
Upf1Q9EPU0 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Upf1Q9EPU0 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC23.15■■□□□ 1.3
Upf1Q9EPU0 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Upf1Q9EPU0 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Upf1Q9EPU0 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Upf1Q9EPU0 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC23.14■■□□□ 1.29
Upf1Q9EPU0 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Upf1Q9EPU0 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Upf1Q9EPU0 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
Upf1Q9EPU0 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
Upf1Q9EPU0 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Upf1Q9EPU0 Gm10655-201ENSMUST00000098658 1397 ntBASIC23.14■■□□□ 1.29
Upf1Q9EPU0 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Upf1Q9EPU0 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Upf1Q9EPU0 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Upf1Q9EPU0 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Upf1Q9EPU0 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC23.13■■□□□ 1.29
Upf1Q9EPU0 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC23.13■■□□□ 1.29
Upf1Q9EPU0 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC23.13■■□□□ 1.29
Upf1Q9EPU0 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Upf1Q9EPU0 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Upf1Q9EPU0 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Upf1Q9EPU0 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC23.13■■□□□ 1.29
Upf1Q9EPU0 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
Upf1Q9EPU0 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Upf1Q9EPU0 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC23.12■■□□□ 1.29
Upf1Q9EPU0 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Upf1Q9EPU0 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
Upf1Q9EPU0 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Upf1Q9EPU0 Gm10571-201ENSMUST00000097869 1638 ntBASIC23.11■■□□□ 1.29
Upf1Q9EPU0 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Upf1Q9EPU0 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Upf1Q9EPU0 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC23.11■■□□□ 1.29
Upf1Q9EPU0 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
Upf1Q9EPU0 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC23.11■■□□□ 1.29
Upf1Q9EPU0 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC23.11■■□□□ 1.29
Upf1Q9EPU0 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Upf1Q9EPU0 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC23.11■■□□□ 1.29
Upf1Q9EPU0 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC23.11■■□□□ 1.29
Upf1Q9EPU0 AC153881.2-201ENSMUST00000214877 204 ntBASIC23.11■■□□□ 1.29
Upf1Q9EPU0 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Upf1Q9EPU0 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC23.1■■□□□ 1.29
Upf1Q9EPU0 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
Upf1Q9EPU0 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Upf1Q9EPU0 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
Upf1Q9EPU0 Gm10231-201ENSMUST00000181584 441 ntBASIC23.1■■□□□ 1.29
Upf1Q9EPU0 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Upf1Q9EPU0 Gm10175-202ENSMUST00000208752 441 ntBASIC23.1■■□□□ 1.29
Upf1Q9EPU0 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Upf1Q9EPU0 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Upf1Q9EPU0 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
Upf1Q9EPU0 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Upf1Q9EPU0 Gm12896-201ENSMUST00000118430 226 ntBASIC23.09■■□□□ 1.29
Upf1Q9EPU0 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC23.09■■□□□ 1.29
Upf1Q9EPU0 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Upf1Q9EPU0 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Upf1Q9EPU0 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC23.09■■□□□ 1.29
Upf1Q9EPU0 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC23.09■■□□□ 1.29
Upf1Q9EPU0 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Upf1Q9EPU0 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Upf1Q9EPU0 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC23.08■■□□□ 1.29
Upf1Q9EPU0 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms