Protein–RNA interactions for Protein: Q9DA19

Cir1, Corepressor interacting with RBPJ 1, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cir1Q9DA19 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cir1Q9DA19 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Cir1Q9DA19 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Cir1Q9DA19 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cir1Q9DA19 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Cir1Q9DA19 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC17.16■□□□□ 0.34
Cir1Q9DA19 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cir1Q9DA19 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.16■□□□□ 0.34
Cir1Q9DA19 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cir1Q9DA19 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Cir1Q9DA19 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cir1Q9DA19 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cir1Q9DA19 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cir1Q9DA19 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.16■□□□□ 0.34
Cir1Q9DA19 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cir1Q9DA19 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cir1Q9DA19 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cir1Q9DA19 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cir1Q9DA19 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cir1Q9DA19 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cir1Q9DA19 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cir1Q9DA19 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Cir1Q9DA19 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cir1Q9DA19 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Cir1Q9DA19 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cir1Q9DA19 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cir1Q9DA19 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cir1Q9DA19 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Cir1Q9DA19 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Cir1Q9DA19 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cir1Q9DA19 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cir1Q9DA19 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cir1Q9DA19 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cir1Q9DA19 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cir1Q9DA19 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cir1Q9DA19 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Cir1Q9DA19 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cir1Q9DA19 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.14■□□□□ 0.33
Cir1Q9DA19 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cir1Q9DA19 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.14■□□□□ 0.33
Cir1Q9DA19 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cir1Q9DA19 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cir1Q9DA19 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cir1Q9DA19 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cir1Q9DA19 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC17.13■□□□□ 0.33
Cir1Q9DA19 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cir1Q9DA19 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
Cir1Q9DA19 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cir1Q9DA19 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC17.13■□□□□ 0.33
Cir1Q9DA19 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cir1Q9DA19 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cir1Q9DA19 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC17.13■□□□□ 0.33
Cir1Q9DA19 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cir1Q9DA19 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cir1Q9DA19 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Cir1Q9DA19 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cir1Q9DA19 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cir1Q9DA19 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Cir1Q9DA19 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cir1Q9DA19 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cir1Q9DA19 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cir1Q9DA19 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cir1Q9DA19 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cir1Q9DA19 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cir1Q9DA19 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cir1Q9DA19 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cir1Q9DA19 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cir1Q9DA19 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cir1Q9DA19 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cir1Q9DA19 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cir1Q9DA19 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Cir1Q9DA19 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cir1Q9DA19 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cir1Q9DA19 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cir1Q9DA19 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC17.12■□□□□ 0.33
Cir1Q9DA19 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cir1Q9DA19 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC17.12■□□□□ 0.33
Cir1Q9DA19 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cir1Q9DA19 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cir1Q9DA19 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cir1Q9DA19 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Cir1Q9DA19 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cir1Q9DA19 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cir1Q9DA19 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cir1Q9DA19 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cir1Q9DA19 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Cir1Q9DA19 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cir1Q9DA19 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Cir1Q9DA19 Gm44949-201ENSMUST00000206423 1450 ntBASIC17.11■□□□□ 0.33
Cir1Q9DA19 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cir1Q9DA19 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cir1Q9DA19 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cir1Q9DA19 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cir1Q9DA19 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cir1Q9DA19 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cir1Q9DA19 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.1■□□□□ 0.33
Cir1Q9DA19 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cir1Q9DA19 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Cir1Q9DA19 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC17.1■□□□□ 0.33
Cir1Q9DA19 Gm5131-201ENSMUST00000212776 1238 ntBASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms